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Spg018562 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018562
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold3:9234121..9234438
RNA-Seq ExpressionSpg018562
SyntenySpg018562
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]6.4e-0839.13Show/hide
Query:  MGHYSSN----TAAATAAMAVLILTLSASTCKAASPLPPNFVNETVAAVASMWCNGVPEKCLAVEE---------TINFNNYIGTKTGNRGSSICGRYYM
        MGH S++     AAA AAM V IL LS S C  ASP P ++ N TVAA ASMWC+G  E+C+  E+           +   +I   T NR   +C R   
Subjt:  MGHYSSN----TAAATAAMAVLILTLSASTCKAASPLPPNFVNETVAAVASMWCNGVPEKCLAVEE---------TINFNNYIGTKTGNRGSSICGRYYM

Query:  GRYIGCIDKDQASSK
        G Y  C +  + ++K
Subjt:  GRYIGCIDKDQASSK

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]9.3e-0737.17Show/hide
Query:  MGHYS-SNTAAATAAMAVLILTLSASTCKAASPLPPNFVNETVAAVASMWCNGVPEKCLAVEE---------TINFNNYIGTKTGNRGSSICGRYYMGRY
        MGH S S    A AAM V IL LS S C  ASP P ++ N TVAA ASMWC+G  E+C+  E            +   YI   + N   ++C R     Y
Subjt:  MGHYS-SNTAAATAAMAVLILTLSASTCKAASPLPPNFVNETVAAVASMWCNGVPEKCLAVEE---------TINFNNYIGTKTGNRGSSICGRYYMGRY

Query:  IGCIDKDQASSKP
          C +  +++  P
Subjt:  IGCIDKDQASSKP

KGN53789.1 hypothetical protein Csa_015152 [Cucumis sativus]6.6e-1350.52Show/hide
Query:  AAATAAMAVLILTLSAST-CKAASPLPPNFVNETVAAVAS-MWCNGVPEKCLAVEETINFNNYIGTKTGNRGSSICGRYYMGRYIGCIDKDQASSKP
        A +T AM +LILTL+ S+ C AAS LP NF NET+ A+ S ++CNG+ ++C  VEE    + Y   +TG+R SS+CGR+Y G YI CI   Q S KP
Subjt:  AAATAAMAVLILTLSAST-CKAASPLPPNFVNETVAAVAS-MWCNGVPEKCLAVEETINFNNYIGTKTGNRGSSICGRYYMGRYIGCIDKDQASSKP

TrEMBL top hitse value%identityAlignment
A0A0A0KY59 Uncharacterized protein3.2e-1350.52Show/hide
Query:  AAATAAMAVLILTLSAST-CKAASPLPPNFVNETVAAVAS-MWCNGVPEKCLAVEETINFNNYIGTKTGNRGSSICGRYYMGRYIGCIDKDQASSKP
        A +T AM +LILTL+ S+ C AAS LP NF NET+ A+ S ++CNG+ ++C  VEE    + Y   +TG+R SS+CGR+Y G YI CI   Q S KP
Subjt:  AAATAAMAVLILTLSAST-CKAASPLPPNFVNETVAAVAS-MWCNGVPEKCLAVEETINFNNYIGTKTGNRGSSICGRYYMGRYIGCIDKDQASSKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACATTATTCTTCAAACACCGCCGCCGCAACGGCAGCCATGGCCGTCCTGATTTTGACGCTGAGCGCGAGCACATGCAAGGCTGCTTCTCCACTTCCTCCCAATTT
CGTCAACGAGACCGTCGCTGCTGTGGCATCCATGTGGTGCAATGGCGTCCCCGAAAAATGCCTCGCCGTTGAAGAAACCATTAATTTTAATAATTACATTGGTACAAAGA
CCGGAAACCGAGGTAGTTCTATATGTGGTCGGTACTATATGGGAAGATATATCGGCTGTATCGACAAGGATCAAGCATCCTCCAAGCCACCAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACATTATTCTTCAAACACCGCCGCCGCAACGGCAGCCATGGCCGTCCTGATTTTGACGCTGAGCGCGAGCACATGCAAGGCTGCTTCTCCACTTCCTCCCAATTT
CGTCAACGAGACCGTCGCTGCTGTGGCATCCATGTGGTGCAATGGCGTCCCCGAAAAATGCCTCGCCGTTGAAGAAACCATTAATTTTAATAATTACATTGGTACAAAGA
CCGGAAACCGAGGTAGTTCTATATGTGGTCGGTACTATATGGGAAGATATATCGGCTGTATCGACAAGGATCAAGCATCCTCCAAGCCACCAATATGA
Protein sequenceShow/hide protein sequence
MGHYSSNTAAATAAMAVLILTLSASTCKAASPLPPNFVNETVAAVASMWCNGVPEKCLAVEETINFNNYIGTKTGNRGSSICGRYYMGRYIGCIDKDQASSKPPI