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Spg018576 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018576
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpartner of Y14 and mago-like
Genome locationscaffold3:19723734..19724304
RNA-Seq ExpressionSpg018576
SyntenySpg018576
Gene Ontology termsGO:1903259 - exon-exon junction complex disassembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159168.1 partner of Y14 and mago isoform X1 [Momordica charantia]2.3e-1289.36Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTS
        IRIAEAQLQKTP+ DMKPEQLNKLSKLEDWRSEL LLEEQRL+ NTS
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTS
XP_022159171.1 partner of Y14 and mago isoform X2 [Momordica charantia]2.3e-1289.36Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTS
        IRIAEAQLQKTP+ DMKPEQLNKLSKLEDWRSEL LLEEQRL+ NTS
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTS
XP_022971939.1 partner of Y14 and mago-like [Cucurbita maxima]3.0e-1287.5Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
        IRIAEAQLQKTPL DMKPEQ+NKLSKLE+WRSELMLLEEQRLK N+ S
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
XP_023554038.1 partner of Y14 and mago-like isoform X1 [Cucurbita pepo subsp. pepo]2.3e-1287.5Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
        IRIAEAQLQKTPL DMKPEQ+NKLSKLE+WRSELMLLEEQRLK N+ S
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
XP_023554039.1 partner of Y14 and mago-like isoform X2 [Cucurbita pepo subsp. pepo]2.3e-1287.5Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
        IRIAEAQLQKTPL DMKPEQ+NKLSKLE+WRSELMLLEEQRLK N+ S
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
TrEMBL top hitse value%identityAlignment
A0A1S3C0A7 partner of Y14 and mago isoform X12.4e-1287.5Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
        IR+AEAQLQKTPL DMKPEQ NKLSKLE WRSELMLLEEQRLK N+SS
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
A0A5A7SL23 Partner of Y14 and mago isoform X12.4e-1287.5Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
        IR+AEAQLQKTPL DMKPEQ NKLSKLE WRSELMLLEEQRLK N+SS
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
A0A6J1DY25 partner of Y14 and mago isoform X11.1e-1289.36Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTS
        IRIAEAQLQKTP+ DMKPEQLNKLSKLEDWRSEL LLEEQRL+ NTS
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTS
A0A6J1E341 partner of Y14 and mago isoform X21.1e-1289.36Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTS
        IRIAEAQLQKTP+ DMKPEQLNKLSKLEDWRSEL LLEEQRL+ NTS
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTS
A0A6J1IA06 partner of Y14 and mago-like1.4e-1287.5Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
        IRIAEAQLQKTPL DMKPEQ+NKLSKLE+WRSELMLLEEQRLK N+ S
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS
SwissProt top hitse value%identityAlignment
Q9LPZ4 Partner of Y14 and mago1.2e-0560Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQ
        IR+ EAQ QKT   D+ PEQL K SKLE+WR EL  LE++
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQ
Arabidopsis top hitse value%identityAlignment
AT1G11400.1 partner of Y14-MAGO8.9e-0760Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQ
        IR+ EAQ QKT   D+ PEQL K SKLE+WR EL  LE++
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQ
AT1G11400.2 partner of Y14-MAGO8.9e-0760Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQ
        IR+ EAQ QKT   D+ PEQL K SKLE+WR EL  LE++
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQ
AT1G11400.3 partner of Y14-MAGO8.9e-0760Show/hide
Query:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQ
        IR+ EAQ QKT   D+ PEQL K SKLE+WR EL  LE++
Subjt:  IRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAACATCTTTTAATGAATTATTGGTGTCATTATGGACAGCTGAAGATTTGAGTTTTTGCTTAATATTTATTCGAATTGCAGAAGCTCAGTTGCAGAAAACACCACT
GCATGATATGAAGCCAGAGCAGTTGAACAAGTTATCAAAACTCGAAGATTGGCGCTCTGAACTAATGCTTCTCGAAGAACAAAGGCTAAAACAGAACACGTCGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAACATCTTTTAATGAATTATTGGTGTCATTATGGACAGCTGAAGATTTGAGTTTTTGCTTAATATTTATTCGAATTGCAGAAGCTCAGTTGCAGAAAACACCACT
GCATGATATGAAGCCAGAGCAGTTGAACAAGTTATCAAAACTCGAAGATTGGCGCTCTGAACTAATGCTTCTCGAAGAACAAAGGCTAAAACAGAACACGTCGTCATGA
Protein sequenceShow/hide protein sequence
MRTSFNELLVSLWTAEDLSFCLIFIRIAEAQLQKTPLHDMKPEQLNKLSKLEDWRSELMLLEEQRLKQNTSS