; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018602 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018602
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold3:8959737..8969013
RNA-Seq ExpressionSpg018602
SyntenySpg018602
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055183.1 gag/pol protein [Cucumis melo var. makuwa]8.6e-0462.16Show/hide
Query:  HREISMLRLLVCPGATNHSEGCNMEIGTTQTPEMDRI
        HREI ++RLLVCPG T HSEGC +E+ T +TP +DR+
Subjt:  HREISMLRLLVCPGATNHSEGCNMEIGTTQTPEMDRI
TrEMBL top hitse value%identityAlignment
A0A5D3DQ34 Gag/pol protein4.2e-0462.16Show/hide
Query:  HREISMLRLLVCPGATNHSEGCNMEIGTTQTPEMDRI
        HREI ++RLLVCPG T HSEGC +E+ T +TP +DR+
Subjt:  HREISMLRLLVCPGATNHSEGCNMEIGTTQTPEMDRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGCCGCGCGCCTTTGTTCACGTTCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTAAGGACGGGTAGGAGTGAATTCCATCTGAGTTATGCTGC
CAAAATCTCTCCAAAAACCCATGCACTCAAACTTCTCTTGAAGCTTGTTTTTCAAGCTCTTTCCCTTTCAAATTCCATCACTAGAGGATCCCACGATCCATTCCAAAGGC
TTGAGGATATCAAGGAAGATCAAGTGGTGGTTCGTGACAAGTTGGTAGCCGGCAACCCCCCCTTTCAGCTTCTTCTTCGCGCGCTGACAACTCTTCCCATGGGTTCTCTC
CGACAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTTCGCATGTGTAATATGTACACCTTCAGCCGCATCCCGTCTCCCTCT
GCTTCGCATGCGCGTTCGGGCTGATTTAAGGATCGTTTCGGCGTGTTTAGGATCTTTTGGTTCGCTTAGGAGCGCTTTATATGGCCAATACTTTGCTAAGTCATCGGTGC
ACCTTGGGTACAAATGGTCAAGGGGCGATGCACAATTTGAGGCTTTGGGTACAAATGGTCAAGGGTCGAATGCCGAGCTCCGTAGAGAGCATTGTGGCCCTGGCTTGTCT
TTGCATGGAGGAGGTCTTTATAAGGAGCTTGAATCAGATTCAAAGGATAGAGAGCTTTTACCTACTGCTGTTAAATCGAAGCAAAACGGGAGAAGACGCAGCAGAAAACA
GCAGCAGATTGCTGCTGTGCGTGACAGCGTCGGGACACTCTTCAAGCAGCGTCCCGACGCTGTTGAAGAAAATTTTCCAGTAGTAGCAGTTTTCAAATCTGGTCCGGTTC
AGCTGCTTCTGTCTTGGTCCGGTTCGATTTATGCTTGGCCTCGTGTTGATTATACCTCAACTGCTCCATTCGGAAGGTTGCACCGTGAGATTTCCATGTTGCGCCTGCTT
GTATGCCCTGGAGCTACTAACCATTCGGAGGGTTGTAACATGGAGATCGGAACAACGCAAACTCCAGAGATGGATAGGATTACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGCCGCGCGCCTTTGTTCACGTTCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTAAGGACGGGTAGGAGTGAATTCCATCTGAGTTATGCTGC
CAAAATCTCTCCAAAAACCCATGCACTCAAACTTCTCTTGAAGCTTGTTTTTCAAGCTCTTTCCCTTTCAAATTCCATCACTAGAGGATCCCACGATCCATTCCAAAGGC
TTGAGGATATCAAGGAAGATCAAGTGGTGGTTCGTGACAAGTTGGTAGCCGGCAACCCCCCCTTTCAGCTTCTTCTTCGCGCGCTGACAACTCTTCCCATGGGTTCTCTC
CGACAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTTCGCATGTGTAATATGTACACCTTCAGCCGCATCCCGTCTCCCTCT
GCTTCGCATGCGCGTTCGGGCTGATTTAAGGATCGTTTCGGCGTGTTTAGGATCTTTTGGTTCGCTTAGGAGCGCTTTATATGGCCAATACTTTGCTAAGTCATCGGTGC
ACCTTGGGTACAAATGGTCAAGGGGCGATGCACAATTTGAGGCTTTGGGTACAAATGGTCAAGGGTCGAATGCCGAGCTCCGTAGAGAGCATTGTGGCCCTGGCTTGTCT
TTGCATGGAGGAGGTCTTTATAAGGAGCTTGAATCAGATTCAAAGGATAGAGAGCTTTTACCTACTGCTGTTAAATCGAAGCAAAACGGGAGAAGACGCAGCAGAAAACA
GCAGCAGATTGCTGCTGTGCGTGACAGCGTCGGGACACTCTTCAAGCAGCGTCCCGACGCTGTTGAAGAAAATTTTCCAGTAGTAGCAGTTTTCAAATCTGGTCCGGTTC
AGCTGCTTCTGTCTTGGTCCGGTTCGATTTATGCTTGGCCTCGTGTTGATTATACCTCAACTGCTCCATTCGGAAGGTTGCACCGTGAGATTTCCATGTTGCGCCTGCTT
GTATGCCCTGGAGCTACTAACCATTCGGAGGGTTGTAACATGGAGATCGGAACAACGCAAACTCCAGAGATGGATAGGATTACTTAG
Protein sequenceShow/hide protein sequence
MRGPRAFVHVPESALKGTTSLLSLRTGRSEFHLSYAAKISPKTHALKLLLKLVFQALSLSNSITRGSHDPFQRLEDIKEDQVVVRDKLVAGNPPFQLLLRALTTLPMGSL
RQHACFRSKIECLKCFRSSIAFACVICTPSAASRLPLLRMRVRADLRIVSACLGSFGSLRSALYGQYFAKSSVHLGYKWSRGDAQFEALGTNGQGSNAELRREHCGPGLS
LHGGGLYKELESDSKDRELLPTAVKSKQNGRRRSRKQQQIAAVRDSVGTLFKQRPDAVEENFPVVAVFKSGPVQLLLSWSGSIYAWPRVDYTSTAPFGRLHREISMLRLL
VCPGATNHSEGCNMEIGTTQTPEMDRIT