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Spg018645 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018645
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionALA-interacting subunit 5
Genome locationscaffold3:19959191..19965555
RNA-Seq ExpressionSpg018645
SyntenySpg018645
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein8.0e-0478.26Show/hide
Query:  PLYYRFTQQELPACKPILTLEWV
        P Y +FTQQELPACKPILT  WV
Subjt:  PLYYRFTQQELPACKPILTLEWV
AT1G79450.1 ALA-interacting subunit 52.1e-0482.61Show/hide
Query:  PLYYRFTQQELPACKPILTLEWV
        P Y RFTQQELPACKPILT  WV
Subjt:  PLYYRFTQQELPACKPILTLEWV
AT3G12740.1 ALA-interacting subunit 18.0e-0478.26Show/hide
Query:  PLYYRFTQQELPACKPILTLEWV
        P Y +FTQQELPACKPILT  WV
Subjt:  PLYYRFTQQELPACKPILTLEWV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTGCGTCTTTCAGATCTTACTCCACGTCTTTTCACGAGGAAAGAGATACGTTTGGGCCGATCAATGTTCCCTCCGACAGGTATTGCTCTATTACGTGAACTTAG
AGTTCTACAGAAAGAGGGGAAACTAGAAACTGGATTGCAGGATTTCTTGATTTACATAGAAGGTGCGTTCCTTCTAGCCATTTGCAAGCTTCATTCTCATGTCATGGAGT
TCTGTATTTATGTTATTTGTCCTTTATATTATAGATTTACACAGCAAGAGCTTCCTGCTTGCAAACCAATTTTAACACTAGAATGGGTTTCAAAGTTCTCCTACGATAAT
CCATTGCAAATATTTTACAAGCTCCAAGATTACCTTTTTGATGACAAAATTAATAGAGTTAAGGTACTTTTCCTTGGTGTTGATTGCTTTTTGATTGCGACCCACAGCTG
CACTCTTCTCACTGTAGAATATTTCTGTGTCCATGGATATCGACCAATAACAGTAAGTCAATCCTTCACGAGTGTTCGTAACGCCAGCTGGGTCAAATTACCGTTTTACC
CCTGGGTTACCTCTGGATCCTTAAGTACCACTGATTCCTCTAATGAACAATCTGTTTATGATCCAATCAATAAACAGCAGTTCCTCTCGGGCCAGAAGAGGATGGGCGCC
CTTGTTCAAGACCCGGAATCAGCCCTTAAGGGAACACACATCTACTTGCCCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTGCGTCTTTCAGATCTTACTCCACGTCTTTTCACGAGGAAAGAGATACGTTTGGGCCGATCAATGTTCCCTCCGACAGGTATTGCTCTATTACGTGAACTTAG
AGTTCTACAGAAAGAGGGGAAACTAGAAACTGGATTGCAGGATTTCTTGATTTACATAGAAGGTGCGTTCCTTCTAGCCATTTGCAAGCTTCATTCTCATGTCATGGAGT
TCTGTATTTATGTTATTTGTCCTTTATATTATAGATTTACACAGCAAGAGCTTCCTGCTTGCAAACCAATTTTAACACTAGAATGGGTTTCAAAGTTCTCCTACGATAAT
CCATTGCAAATATTTTACAAGCTCCAAGATTACCTTTTTGATGACAAAATTAATAGAGTTAAGGTACTTTTCCTTGGTGTTGATTGCTTTTTGATTGCGACCCACAGCTG
CACTCTTCTCACTGTAGAATATTTCTGTGTCCATGGATATCGACCAATAACAGTAAGTCAATCCTTCACGAGTGTTCGTAACGCCAGCTGGGTCAAATTACCGTTTTACC
CCTGGGTTACCTCTGGATCCTTAAGTACCACTGATTCCTCTAATGAACAATCTGTTTATGATCCAATCAATAAACAGCAGTTCCTCTCGGGCCAGAAGAGGATGGGCGCC
CTTGTTCAAGACCCGGAATCAGCCCTTAAGGGAACACACATCTACTTGCCCCAATAG
Protein sequenceShow/hide protein sequence
MLLRLSDLTPRLFTRKEIRLGRSMFPPTGIALLRELRVLQKEGKLETGLQDFLIYIEGAFLLAICKLHSHVMEFCIYVICPLYYRFTQQELPACKPILTLEWVSKFSYDN
PLQIFYKLQDYLFDDKINRVKVLFLGVDCFLIATHSCTLLTVEYFCVHGYRPITVSQSFTSVRNASWVKLPFYPWVTSGSLSTTDSSNEQSVYDPINKQQFLSGQKRMGA
LVQDPESALKGTHIYLPQ