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Spg018665 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018665
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold3:20149487..20151370
RNA-Seq ExpressionSpg018665
SyntenySpg018665
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN83427.1 hypothetical protein VITISV_009103 [Vitis vinifera]4.9e-1641.53Show/hide
Query:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST
        W+    SFG +  L           FF   ++  ++ +++E+I R+FLW GV + +  HLV W+ V K    GGL +G + LRN+ALL KWLW+F  EST
Subjt:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST

Query:  SLWHQIIVSKYCYHPYEW
        SLWHQ+I+S Y  H   W
Subjt:  SLWHQIIVSKYCYHPYEW

KAA0032235.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]4.9e-1639.1Show/hide
Query:  GVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSLRGEGGRGVKGSFFH-WLQIK---------
        GVV+  + +L+S + VG  V  GGL +GNLR+RN+ALL KWLW F LE  SLW++II+SK+   P+EW++      RGVKG+F + W  I          
Subjt:  GVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSLRGEGGRGVKGSFFH-WLQIK---------

Query:  -------------------------------SFRDHREVIEEFLLHPPFKDKGRML
                                       SF D   +IEEFLLHPPF +KG +L
Subjt:  -------------------------------SFRDHREVIEEFLLHPPFKDKGRML

RVW15726.1 putative ribonuclease H protein [Vitis vinifera]3.8e-1639.83Show/hide
Query:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST
        W+    SFG +  L           F  + ++  ++ +++E++ R+FLW GV + +  HLV W+ V K    GGL +G + LRN+ALL KWLW+F  EST
Subjt:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST

Query:  SLWHQIIVSKYCYHPYEW
        SLWHQ+I+S Y  H   W
Subjt:  SLWHQIIVSKYCYHPYEW

TQD69489.1 hypothetical protein C1H46_044978 [Malus baccata]2.9e-1645Show/hide
Query:  LDVFFL-VVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSL
        L ++++ + ++   +  RLEK+++ FLWEGV + ++ HLV W+ V K+   GGL +GNLR +N+ALL KWLW+F  ES SLWH++I SKY      W +L
Subjt:  LDVFFL-VVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSL

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]3.7e-1943.9Show/hide
Query:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST
        WK   +S G +  L         + +  + R+   +   LEKI+R+FLWEGV +    HLV+WK V K +  GGL +GNLRLRN+A L KWLW+F  E  
Subjt:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST

Query:  SLWHQIIVSKYCYHPYEWLSLRG
        +LW +IIVSKY  HP +W+   G
Subjt:  SLWHQIIVSKYCYHPYEWLSLRG

TrEMBL top hitse value%identityAlignment
A0A438BXJ5 Putative ribonuclease H protein1.8e-1639.83Show/hide
Query:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST
        W+    SFG +  L           F  + ++  ++ +++E++ R+FLW GV + +  HLV W+ V K    GGL +G + LRN+ALL KWLW+F  EST
Subjt:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST

Query:  SLWHQIIVSKYCYHPYEW
        SLWHQ+I+S Y  H   W
Subjt:  SLWHQIIVSKYCYHPYEW

A0A540K5H1 Uncharacterized protein1.4e-1645Show/hide
Query:  LDVFFL-VVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSL
        L ++++ + ++   +  RLEK+++ FLWEGV + ++ HLV W+ V K+   GGL +GNLR +N+ALL KWLW+F  ES SLWH++I SKY      W +L
Subjt:  LDVFFL-VVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSL

A0A5A7SSQ8 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X12.4e-1639.1Show/hide
Query:  GVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSLRGEGGRGVKGSFFH-WLQIK---------
        GVV+  + +L+S + VG  V  GGL +GNLR+RN+ALL KWLW F LE  SLW++II+SK+   P+EW++      RGVKG+F + W  I          
Subjt:  GVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSLRGEGGRGVKGSFFH-WLQIK---------

Query:  -------------------------------SFRDHREVIEEFLLHPPFKDKGRML
                                       SF D   +IEEFLLHPPF +KG +L
Subjt:  -------------------------------SFRDHREVIEEFLLHPPFKDKGRML

A0A6J1DFI2 uncharacterized protein LOC1110196241.8e-1943.9Show/hide
Query:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST
        WK   +S G +  L         + +  + R+   +   LEKI+R+FLWEGV +    HLV+WK V K +  GGL +GNLRLRN+A L KWLW+F  E  
Subjt:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST

Query:  SLWHQIIVSKYCYHPYEWLSLRG
        +LW +IIVSKY  HP +W+   G
Subjt:  SLWHQIIVSKYCYHPYEWLSLRG

A5BN97 Reverse transcriptase domain-containing protein2.4e-1641.53Show/hide
Query:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST
        W+    SFG +  L           FF   ++  ++ +++E+I R+FLW GV + +  HLV W+ V K    GGL +G + LRN+ALL KWLW+F  EST
Subjt:  WKINSYSFGAKWDL---------DVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLEST

Query:  SLWHQIIVSKYCYHPYEW
        SLWHQ+I+S Y  H   W
Subjt:  SLWHQIIVSKYCYHPYEW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAATCAGGTGCCACTAATTTACGGTGGATATCCAGCAATTGGTGAGATTGACAATAGCGGCCATGGATTGGATGCTTTGGTGGCCAATAACCCCACACTACTCTT
CCTACGAATAAGTGGAGGCTTTTTATGTGTGAGGTGGAAGATTAACTCTTATTCGTTTGGTGCTAAGTGGGATCTCGATGTATTTTTTCTCGTTGTTAGAGTCACAAATG
CGATATGTAGTCGTCTGGAGAAGATTATAAGAAATTTTCTATGGGAAGGGGTTGTTAAGTGGAGGGAAGTTCACCTTGTGAGTTGGAAGACGGTGGGAAAGCATGTGGGT
CATGGCGGGCTAGAATTAGGGAATTTGAGACTGAGAAATAAAGCCCTACTAACTAAATGGTTGTGGCAATTCTTGCTTGAATCAACCTCTTTGTGGCACCAGATTATTGT
GAGTAAGTATTGCTACCATCCCTATGAGTGGCTTTCCTTGAGGGGGGAGGGGGGAAGGGGGGTTAAAGGCTCCTTTTTTCACTGGTTGCAGATCAAGAGCTTTAGAGACC
ACAGGGAGGTGATCGAGGAGTTCCTCCTCCATCCGCCGTTCAAAGATAAGGGGAGGATGTTATGGCTTGTTCGGGTGTGTGCTGTTTTTTGGGATTATGCAGGTGTTGAT
GAGGTTTATGTGCCCAATGATGTAGATGAGGAGGTTCACGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAATCAGGTGCCACTAATTTACGGTGGATATCCAGCAATTGGTGAGATTGACAATAGCGGCCATGGATTGGATGCTTTGGTGGCCAATAACCCCACACTACTCTT
CCTACGAATAAGTGGAGGCTTTTTATGTGTGAGGTGGAAGATTAACTCTTATTCGTTTGGTGCTAAGTGGGATCTCGATGTATTTTTTCTCGTTGTTAGAGTCACAAATG
CGATATGTAGTCGTCTGGAGAAGATTATAAGAAATTTTCTATGGGAAGGGGTTGTTAAGTGGAGGGAAGTTCACCTTGTGAGTTGGAAGACGGTGGGAAAGCATGTGGGT
CATGGCGGGCTAGAATTAGGGAATTTGAGACTGAGAAATAAAGCCCTACTAACTAAATGGTTGTGGCAATTCTTGCTTGAATCAACCTCTTTGTGGCACCAGATTATTGT
GAGTAAGTATTGCTACCATCCCTATGAGTGGCTTTCCTTGAGGGGGGAGGGGGGAAGGGGGGTTAAAGGCTCCTTTTTTCACTGGTTGCAGATCAAGAGCTTTAGAGACC
ACAGGGAGGTGATCGAGGAGTTCCTCCTCCATCCGCCGTTCAAAGATAAGGGGAGGATGTTATGGCTTGTTCGGGTGTGTGCTGTTTTTTGGGATTATGCAGGTGTTGAT
GAGGTTTATGTGCCCAATGATGTAGATGAGGAGGTTCACGAAGAATGA
Protein sequenceShow/hide protein sequence
MQNQVPLIYGGYPAIGEIDNSGHGLDALVANNPTLLFLRISGGFLCVRWKINSYSFGAKWDLDVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVG
HGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSLRGEGGRGVKGSFFHWLQIKSFRDHREVIEEFLLHPPFKDKGRMLWLVRVCAVFWDYAGVD
EVYVPNDVDEEVHEE