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Spg018673 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018673
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold3:17101370..17105849
RNA-Seq ExpressionSpg018673
SyntenySpg018673
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032262.1 Ulp1-like peptidase [Cucumis melo var. makuwa]1.5e-0576.92Show/hide
Query:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILHY
        PSRANE+VGPL+Q LDS LKGTT LLS   VGVNSILH+
Subjt:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILHY

KAA0047518.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.1e-0564.58Show/hide
Query:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILHYYVPNHPSSV
        PSRANE+VGPL+Q LDS LKGTT LLS   VGVN  L  YVP++P  +
Subjt:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILHYYVPNHPSSV

KAA0047869.1 hypothetical protein E6C27_scaffold133G001380 [Cucumis melo var. makuwa]5.4e-0852.5Show/hide
Query:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH-YYVPNHPSSVIPKNGRIIEQNFMTTLTYADQRITLNKQEFI
        PSRANE+VGPL+Q LDS LKGTT LLS   VGVNS+LH   +  H  SV+      + Q      TY D RI  N+Q+FI
Subjt:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH-YYVPNHPSSVIPKNGRIIEQNFMTTLTYADQRITLNKQEFI

KAA0056367.1 hypothetical protein E6C27_scaffold186G001040 [Cucumis melo var. makuwa]1.5e-0578.95Show/hide
Query:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH
        PSRANE+VGPL+Q LDS LKG T LLS  RVGVNSILH
Subjt:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH

KAA0058855.1 hypothetical protein E6C27_scaffold98G00150 [Cucumis melo var. makuwa]1.9e-0578.95Show/hide
Query:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH
        PSRANE+VGPL+Q LDS LKGTT LLS N VGV+SILH
Subjt:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH

TrEMBL top hitse value%identityAlignment
A0A5A7SMJ9 Ulp1-like peptidase7.1e-0676.92Show/hide
Query:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILHY
        PSRANE+VGPL+Q LDS LKGTT LLS   VGVNSILH+
Subjt:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILHY

A0A5A7U348 Uncharacterized protein2.6e-0852.5Show/hide
Query:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH-YYVPNHPSSVIPKNGRIIEQNFMTTLTYADQRITLNKQEFI
        PSRANE+VGPL+Q LDS LKGTT LLS   VGVNS+LH   +  H  SV+      + Q      TY D RI  N+Q+FI
Subjt:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH-YYVPNHPSSVIPKNGRIIEQNFMTTLTYADQRITLNKQEFI

A0A5D3DRY2 Gag-protease polyprotein5.5e-0664.58Show/hide
Query:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILHYYVPNHPSSV
        PSRANE+VGPL+Q LDS LKGTT LLS   VGVN  L  YVP++P  +
Subjt:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILHYYVPNHPSSV

A0A5D3DS73 Uncharacterized protein9.3e-0681.08Show/hide
Query:  SRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH
        SRANERVGPL+Q LDS LKGTT LL+L RVGVN ILH
Subjt:  SRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH

A0A5D3E0A7 Uncharacterized protein7.1e-0678.95Show/hide
Query:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH
        PSRANE+VGPL+Q LDS LKG T LLS  RVGVNSILH
Subjt:  PSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGCGTCACGACGCTCTCGTGGCTGGAACACCCTGTTCTTCGACCAGCATATCCCTCTCGAGCCAATGAGAGGGTGGGGCCCCTTATTCAAGTCTTGGATTCAGC
ACTTAAGGGAACAACCTCTCTACTATCCCTGAATAGGGTAGGAGTGAATTCCATATTGCATTACTATGTCCCCAACCATCCATCTAGTGTTATCCCAAAAAATGGCAGGA
TTATTGAACAAAATTTTATGACCACTCTCACCTATGCAGATCAAAGGATAACCCTAAACAAACAGGAGTTCATAGATGCCCCTACTCGCATGTCTTTACATGAACGATCC
AGGATCACGTCGTTTGCCTTATTCGCAAAAAGGAGACGAACTCAAGTTGGCCGAAGAACGGGGGGCTTCCAGTCGCATCAGCGTCGCAACGCTGTTCTTCAGCGTCTCGA
CGCTGATGAGTTTTCAAAGAAGGTGCGCATTTTTCCAGATCTCGGCGGTTCAGTGGTTCTCGATCCGGTTCACCCAAATCTTGGCCGGTTCAGTCCCTTGTGGTCCGGTT
CAGTGACGTTCAAGCCTTGGGAGGTCCGATTCGGTCCGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGCGTCACGACGCTCTCGTGGCTGGAACACCCTGTTCTTCGACCAGCATATCCCTCTCGAGCCAATGAGAGGGTGGGGCCCCTTATTCAAGTCTTGGATTCAGC
ACTTAAGGGAACAACCTCTCTACTATCCCTGAATAGGGTAGGAGTGAATTCCATATTGCATTACTATGTCCCCAACCATCCATCTAGTGTTATCCCAAAAAATGGCAGGA
TTATTGAACAAAATTTTATGACCACTCTCACCTATGCAGATCAAAGGATAACCCTAAACAAACAGGAGTTCATAGATGCCCCTACTCGCATGTCTTTACATGAACGATCC
AGGATCACGTCGTTTGCCTTATTCGCAAAAAGGAGACGAACTCAAGTTGGCCGAAGAACGGGGGGCTTCCAGTCGCATCAGCGTCGCAACGCTGTTCTTCAGCGTCTCGA
CGCTGATGAGTTTTCAAAGAAGGTGCGCATTTTTCCAGATCTCGGCGGTTCAGTGGTTCTCGATCCGGTTCACCCAAATCTTGGCCGGTTCAGTCCCTTGTGGTCCGGTT
CAGTGACGTTCAAGCCTTGGGAGGTCCGATTCGGTCCGTTTTAA
Protein sequenceShow/hide protein sequence
MNSVTTLSWLEHPVLRPAYPSRANERVGPLIQVLDSALKGTTSLLSLNRVGVNSILHYYVPNHPSSVIPKNGRIIEQNFMTTLTYADQRITLNKQEFIDAPTRMSLHERS
RITSFALFAKRRRTQVGRRTGGFQSHQRRNAVLQRLDADEFSKKVRIFPDLGGSVVLDPVHPNLGRFSPLWSGSVTFKPWEVRFGPF