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Spg018677 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018677
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionagamous-like MADS-box protein AGL62
Genome locationscaffold3:10267881..10271213
RNA-Seq ExpressionSpg018677
SyntenySpg018677
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041553.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa]1.1e-2059.26Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN KVF F H D D+LLD +L  N    K  E Y+ VAEFN DF++ A E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  E-KEDFRK
           ED RK
Subjt:  E-KEDFRK

KAG6574839.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2057.69Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN KVF F H D D+LLD +L  N    K  E YV VAEFN DF+++  E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  EKED
        +  +
Subjt:  EKED

KAG7013413.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2057.69Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN KVF F H D D+LLD +L  N    K  E YV VAEFN DF+++  E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  EKED
        +  +
Subjt:  EKED

XP_008466532.1 PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]1.1e-2059.26Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN KVF F H D D+LLD +L  N    K  E Y+ VAEFN DF++ A E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  E-KEDFRK
           ED RK
Subjt:  E-KEDFRK

XP_023549141.1 agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo]2.5e-2057.69Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN KVF F H D D+LLD +L  N    K  E YV VAEFN DF+++  E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  EKED
        +  +
Subjt:  EKED

TrEMBL top hitse value%identityAlignment
A0A0A0LE01 MADS-box domain-containing protein1.6e-2058.33Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN K+F F H D D+LLD +L  N    K  E Y+ VAEFN DF++ A E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  E-KEDFRK
           ED RK
Subjt:  E-KEDFRK

A0A1S3CRI8 agamous-like MADS-box protein AGL625.3e-2159.26Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN KVF F H D D+LLD +L  N    K  E Y+ VAEFN DF++ A E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  E-KEDFRK
           ED RK
Subjt:  E-KEDFRK

A0A5D3D807 Agamous-like MADS-box protein AGL625.3e-2159.26Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN KVF F H D D+LLD +L  N    K  E Y+ VAEFN DF++ A E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  E-KEDFRK
           ED RK
Subjt:  E-KEDFRK

A0A6J1H4M6 agamous-like MADS-box protein AGL621.2e-2057.69Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN KVF F H D D+LLD +L  N    K  E YV VAEFN DF+++  E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  EKED
        +  +
Subjt:  EKED

A0A6J1KVC9 agamous-like MADS-box protein AGL624.5e-2056.73Show/hide
Query:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI
        EKKSSK+VTFSK  AGLFK   ELS+LC AEVA IV SPN KVF F H + D+LLD +L  N    K  E YV VAEFN DF+++  E E EKK + +LI
Subjt:  EKKSSKEVTFSKLHAGLFKSGAELSILCRAEVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLI

Query:  EKED
        +  +
Subjt:  EKED

SwissProt top hitse value%identityAlignment
O64703 Agamous-like MADS-box protein AGL291.5e-0731.62Show/hide
Query:  LSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFE-------------NFSMSIKSIAMKKTL
        +  + I+ E  +    ++VTFSK   GLFK   EL+ LC AE+ I+V SP GK FS+G  + D + + F+ E             N+   +K ++ +  L
Subjt:  LSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFE-------------NFSMSIKSIAMKKTL

Query:  CRQKIEIKKLKKKSSKE
          Q++E +K + + S+E
Subjt:  CRQKIEIKKLKKKSSKE

O80807 Agamous-like MADS-box protein AGL232.8e-1152.05Show/hide
Query:  VEKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHF
        V+K L  + +E     K +  +VTFSK  AGLFK   E   LC A++A+IV SP GKVFSFGH + D+LLDHF
Subjt:  VEKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHF

Q4PSU4 Agamous-like MADS-box protein AGL611.0e-0843.42Show/hide
Query:  EKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFEN
        ++ +  + I     +K + ++VTFSK  AGLFK   EL  LCGAE+ IIV SP  K FSFGH   + +LD ++  N
Subjt:  EKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFEN

Q9FKK2 Agamous-like MADS-box protein AGL621.4e-1048.05Show/hide
Query:  VEKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFEN
        V+K    + IE    +  +  +VTFSK  +GLFK   EL  LCGAEVAI+V SP  KVFSFGH + D ++D F+  N
Subjt:  VEKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFEN

Q9LMM8 Agamous-like MADS-box protein AGL283.5e-0935.29Show/hide
Query:  KKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFENFSMSIKSIAMKKTLCRQKIEIKKLK
        K L  + IE       +  +VTFSK  +GLFK G EL  LC AE+AIIV SP+GK +SFGH + + LLDH L      +  + A  +T  R ++  + L 
Subjt:  KKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFENFSMSIKSIAMKKTLCRQKIEIKKLK

Query:  KKSSKEVTFSKCRAGLFKN
        +  +++    + +  + +N
Subjt:  KKSSKEVTFSKCRAGLFKN

Arabidopsis top hitse value%identityAlignment
AT1G01530.1 AGAMOUS-like 282.5e-1035.29Show/hide
Query:  KKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFENFSMSIKSIAMKKTLCRQKIEIKKLK
        K L  + IE       +  +VTFSK  +GLFK G EL  LC AE+AIIV SP+GK +SFGH + + LLDH L      +  + A  +T  R ++  + L 
Subjt:  KKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFENFSMSIKSIAMKKTLCRQKIEIKKLK

Query:  KKSSKEVTFSKCRAGLFKN
        +  +++    + +  + +N
Subjt:  KKSSKEVTFSKCRAGLFKN

AT1G65360.1 AGAMOUS-like 232.0e-1252.05Show/hide
Query:  VEKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHF
        V+K L  + +E     K +  +VTFSK  AGLFK   E   LC A++A+IV SP GKVFSFGH + D+LLDHF
Subjt:  VEKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHF

AT2G24840.1 AGAMOUS-like 617.2e-1043.42Show/hide
Query:  EKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFEN
        ++ +  + I     +K + ++VTFSK  AGLFK   EL  LCGAE+ IIV SP  K FSFGH   + +LD ++  N
Subjt:  EKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFEN

AT2G34440.1 AGAMOUS-like 291.0e-0831.62Show/hide
Query:  LSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFE-------------NFSMSIKSIAMKKTL
        +  + I+ E  +    ++VTFSK   GLFK   EL+ LC AE+ I+V SP GK FS+G  + D + + F+ E             N+   +K ++ +  L
Subjt:  LSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFE-------------NFSMSIKSIAMKKTL

Query:  CRQKIEIKKLKKKSSKE
          Q++E +K + + S+E
Subjt:  CRQKIEIKKLKKKSSKE

AT5G60440.1 AGAMOUS-like 621.0e-1148.05Show/hide
Query:  VEKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFEN
        V+K    + IE    +  +  +VTFSK  +GLFK   EL  LCGAEVAI+V SP  KVFSFGH + D ++D F+  N
Subjt:  VEKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAIIVLSPNGKVFSFGHFDDDMLLDHFLFEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTGAGAGGCAAAGTGGTGGATATAGGTGAGAAATTGACGGCGGTCAGAATCGGAGGGTCATTGAGTGGTGTTGAGCTTTCTATTTTGTGCGGAGCAGAGGTTGC
CATCATCGTCTTATCTCCCAATGGTAAGGTGTTTTCATTTGGTCATTGCGACGACGATGTGCTTCAGGATTACCTCCTCTCTAAAAATTTGTCGATGTTGAAGCCGGGTG
AGAGATACGTCTCTGTGGCAGAGAAGAAGAGCAGTAAAGAAGTCACCTTTTCGAAGCTTCATGCTGGACTTTTCAAGAGTGGTGCTGAGCTCTCTATTTTGTGCCGAGCC
GAGGTTGCCAGCATCGTCTTGTCTCCCAACGGTAAGGTGTTTTCCTTTTGTCATTCTGACAACGATATGCTTCTGGATCTCTTTCTGTTTGAAAACTTTTGGATGTCGAA
GTCCGGTGAGAGATACGTCTCTGTGGCAGAGTTTAACTGCGATTTTTCAAATATAGCGGCAGAACTAGAAGTAGAAAAGAAGTTATCTACAAAATTGATAGAGAAAGAGG
ATTTCAGAAAAAGAGCAGTAAAAGAAGTCACCTTTTCGAAGCTTTATGCTGGACTTTTCAAGAATGGTGTTGAGCTCTCTATTTTGTGCGGAGCCGAGGTTGCCATTATC
GTCTTGTCTCCCAACGGTAAGGTGTTTTCCTTTGGTCATTTTGACGACGATATGCTTCTAGATCACTTCCTGTTTGAAAACTTTTCGATGTCGATAAAATCGATTGCAAT
GAAGAAAACCTTATGTCGCCAGAAGATTGAAATCAAGAAGTTAAAGAAGAAGAGCAGTAAAGAAGTCACCTTTTCGAAGTGTCGTGCTGGACTTTTCAAGAATGGTGTTG
AGCTCTCTATTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTTGAGAGGCAAAGTGGTGGATATAGGTGAGAAATTGACGGCGGTCAGAATCGGAGGGTCATTGAGTGGTGTTGAGCTTTCTATTTTGTGCGGAGCAGAGGTTGC
CATCATCGTCTTATCTCCCAATGGTAAGGTGTTTTCATTTGGTCATTGCGACGACGATGTGCTTCAGGATTACCTCCTCTCTAAAAATTTGTCGATGTTGAAGCCGGGTG
AGAGATACGTCTCTGTGGCAGAGAAGAAGAGCAGTAAAGAAGTCACCTTTTCGAAGCTTCATGCTGGACTTTTCAAGAGTGGTGCTGAGCTCTCTATTTTGTGCCGAGCC
GAGGTTGCCAGCATCGTCTTGTCTCCCAACGGTAAGGTGTTTTCCTTTTGTCATTCTGACAACGATATGCTTCTGGATCTCTTTCTGTTTGAAAACTTTTGGATGTCGAA
GTCCGGTGAGAGATACGTCTCTGTGGCAGAGTTTAACTGCGATTTTTCAAATATAGCGGCAGAACTAGAAGTAGAAAAGAAGTTATCTACAAAATTGATAGAGAAAGAGG
ATTTCAGAAAAAGAGCAGTAAAAGAAGTCACCTTTTCGAAGCTTTATGCTGGACTTTTCAAGAATGGTGTTGAGCTCTCTATTTTGTGCGGAGCCGAGGTTGCCATTATC
GTCTTGTCTCCCAACGGTAAGGTGTTTTCCTTTGGTCATTTTGACGACGATATGCTTCTAGATCACTTCCTGTTTGAAAACTTTTCGATGTCGATAAAATCGATTGCAAT
GAAGAAAACCTTATGTCGCCAGAAGATTGAAATCAAGAAGTTAAAGAAGAAGAGCAGTAAAGAAGTCACCTTTTCGAAGTGTCGTGCTGGACTTTTCAAGAATGGTGTTG
AGCTCTCTATTTTGTGA
Protein sequenceShow/hide protein sequence
MYLRGKVVDIGEKLTAVRIGGSLSGVELSILCGAEVAIIVLSPNGKVFSFGHCDDDVLQDYLLSKNLSMLKPGERYVSVAEKKSSKEVTFSKLHAGLFKSGAELSILCRA
EVASIVLSPNGKVFSFCHSDNDMLLDLFLFENFWMSKSGERYVSVAEFNCDFSNIAAELEVEKKLSTKLIEKEDFRKRAVKEVTFSKLYAGLFKNGVELSILCGAEVAII
VLSPNGKVFSFGHFDDDMLLDHFLFENFSMSIKSIAMKKTLCRQKIEIKKLKKKSSKEVTFSKCRAGLFKNGVELSIL