| GenBank top hits | e value | %identity | Alignment |
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| KAG6579716.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] | 1.9e-31 | 53.8 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
MALFRI R SSF +ISTLSTLQLS++SSA+LFY+HLQKNNGNVEKTLATVKTKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
REGCLVDI MFKVILNLCKE KLAKEALSILGK+ EFHL+ADTTMYNL+I
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
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| KAG7017159.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma] | 1.9e-31 | 53.8 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
MALFRI R SSF +ISTLSTLQLS++SSA+LFY+HLQKNNGNVEKTLATVKTKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
REGCLVDI MFKVILNLCKE KLAKEALSILGK+ EFHL+ADTTMYNL+I
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
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| XP_022928928.1 pentatricopeptide repeat-containing protein At5g47360 [Cucurbita moschata] | 9.2e-31 | 53.22 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
MALFRI R SSF +ISTLSTLQLS++SSA+LFY+HLQK NGNVEKTLATVKTKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
REGCLVDI MFKVILNLCKE KLAKEALSILGK+ EFHL+ADTTMYNL+I
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
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| XP_022969835.1 pentatricopeptide repeat-containing protein At5g47360 [Cucurbita maxima] | 9.2e-31 | 52.63 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
MALFRI R SSF +ISTLSTLQLS++SSA+LFY+HLQKNNGNVEKTLATV+TKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
REGCL+DI MFKVILNLCKE KLAKEALSILGK+ EFHL+ADTTMYNL+I
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
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| XP_038874415.1 pentatricopeptide repeat-containing protein At5g47360 [Benincasa hispida] | 7.6e-33 | 54.65 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
M LFRIS RSSSF L+ISTLSTLQLS+ISSA+LFY+HLQKNNGNVEKTLA VKTKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLIIS
REG LVD+RMFK+ILNLCKEAKLAKEALSILGK+PEFHL+ADT+MYNL+IS
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLIIS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LI44 Uncharacterized protein | 1.3e-30 | 50.88 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
MALFRISC RSSSF L ISTLST L+++SS++LFY+HL+K+NGN++KTLAT+KTKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
REGCLVDIRMFK+ILNLCKEAKLAKEALSIL K+ EFHL+ADTTMYNL+I
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
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| A0A1S3B4L9 pentatricopeptide repeat-containing protein At5g47360 | 2.1e-28 | 44.02 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
MALFRIS RSSS L ISTLST LS++SS++LFY+HL+KNNGNVEKTLATVKTKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLIISSTEVEQSILEDLRNRVQLSSVALPSVNF
REGCLVDIR+F++ILNLCKEAKL KEALSIL K+ EFHL+ADTT+YNL+I + + + + ++ SV + N
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLIISSTEVEQSILEDLRNRVQLSSVALPSVNF
Query: YTFINTHNG
T+I+ G
Subjt: YTFINTHNG
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| A0A5A7SSI7 Pentatricopeptide repeat-containing protein | 2.1e-28 | 44.02 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
MALFRIS RSSS L ISTLST LS++SS++LFY+HL+KNNGNVEKTLATVKTKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLIISSTEVEQSILEDLRNRVQLSSVALPSVNF
REGCLVDIR+F++ILNLCKEAKL KEALSIL K+ EFHL+ADTT+YNL+I + + + + ++ SV + N
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLIISSTEVEQSILEDLRNRVQLSSVALPSVNF
Query: YTFINTHNG
T+I+ G
Subjt: YTFINTHNG
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| A0A6J1EQI2 pentatricopeptide repeat-containing protein At5g47360 | 4.5e-31 | 53.22 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
MALFRI R SSF +ISTLSTLQLS++SSA+LFY+HLQK NGNVEKTLATVKTKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
REGCLVDI MFKVILNLCKE KLAKEALSILGK+ EFHL+ADTTMYNL+I
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
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| A0A6J1I125 pentatricopeptide repeat-containing protein At5g47360 | 4.5e-31 | 52.63 | Show/hide |
Query: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
MALFRI R SSF +ISTLSTLQLS++SSA+LFY+HLQKNNGNVEKTLATV+TKLDS
Subjt: MALFRISCSRSSSFHLRISTLSTLQLSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS-----------------------------------------
Query: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
REGCL+DI MFKVILNLCKE KLAKEALSILGK+ EFHL+ADTTMYNL+I
Subjt: ---------------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
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| SwissProt top hits | e value | %identity | Alignment |
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| P49846 Transcription initiation factor TFIID subunit 5 | 8.2e-06 | 40.79 | Show/hide |
Query: LEDLRNRVQLSSVALPSVNFYTFINTHNGLNCSSISHDGALVAGGFSDSSLK-W-LVESKGRHTRTIVSFSHLRKE
L + R+ LS LPS FYT +N+H G+ C+ IS D ++A GF DSS++ W L +K R + S L KE
Subjt: LEDLRNRVQLSSVALPSVNFYTFINTHNGLNCSSISHDGALVAGGFSDSSLK-W-LVESKGRHTRTIVSFSHLRKE
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| Q15542 Transcription initiation factor TFIID subunit 5 | 4.8e-06 | 40.68 | Show/hide |
Query: LEDLRNRVQLSSVALPSVNFYTFINTHNGLNCSSISHDGALVAGGFSDSSLK-WLVESK
+++ RV+L LPS+ FYTF+N + GL ++ D +L+AGGF+DS+++ W V K
Subjt: LEDLRNRVQLSSVALPSVNFYTFINTHNGLNCSSISHDGALVAGGFSDSSLK-WLVESK
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| Q6S7B0 Transcription initiation factor TFIID subunit 5 | 5.1e-24 | 85.94 | Show/hide |
Query: LIISSTEVEQSILEDLRNRVQLSSVALPSVNFYTFINTHNGLNCSSISHDGALVAGGFSDSSLK
L + ST+VEQSILEDLRNRVQLSSVA+PSV+FYTF+NTHNGLNCSSISHDG+LVAGGFSDSS+K
Subjt: LIISSTEVEQSILEDLRNRVQLSSVALPSVNFYTFINTHNGLNCSSISHDGALVAGGFSDSSLK
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| Q8C092 Transcription initiation factor TFIID subunit 5 | 4.8e-06 | 40.68 | Show/hide |
Query: LEDLRNRVQLSSVALPSVNFYTFINTHNGLNCSSISHDGALVAGGFSDSSLK-WLVESK
+++ RV+L LPS+ FYTF+N + GL ++ D +L+AGGF+DS+++ W V K
Subjt: LEDLRNRVQLSSVALPSVNFYTFINTHNGLNCSSISHDGALVAGGFSDSSLK-WLVESK
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| Q9LVS3 Pentatricopeptide repeat-containing protein At5g47360 | 3.7e-06 | 27.16 | Show/hide |
Query: SSSFHLRISTLSTLQ-LSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS--------------------------------------------------
S S + S +S L+ L+++S+AE Y LQ N+EK LA+ +LDS
Subjt: SSSFHLRISTLSTLQ-LSSISSAELFYNHLQKNNGNVEKTLATVKTKLDS--------------------------------------------------
Query: ------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
+E C V+++ +++L LC +A LA EAL +L K PEF++ ADT YNL+I
Subjt: ------------REGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFHLQADTTMYNLII
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