; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018702 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018702
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationscaffold3:11259949..11265574
RNA-Seq ExpressionSpg018702
SyntenySpg018702
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN74381.1 hypothetical protein VITISV_007944 [Vitis vinifera]6.4e-1161.9Show/hide
Query:  MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMINKE
        MA  E  L+I++FHQCSSL+SIKLN +N LLWRSQVLPLVRS G+IHHL+E+     E +  E
Subjt:  MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMINKE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.1e-1424.07Show/hide
Query:  EIEESQLPYERFVNNFARAKYAELLKRDFLFERGFSGDLLHFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGIEVDWSPSAINALY
        E E +   YE  + N  R   AE   + F+ +   +   L F+   I  H W+ FCA PE     +VREFYAN+   +   V VRG++V WS  AINA++
Subjt:  EIEESQLPYERFVNNFARAKYAELLKRDFLFERGFSGDLLHFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGIEVDWSPSAINALY

Query:  NLQNFPHAAYNEMVVAPSNEQLSDAVREV---------------------------------------------VSRERVLLAFAILRSLSIDVGKIIVN
         L + P   ++E +   + + L   +  V                                             VS++R+LL  ++L   SI+VG++I +
Subjt:  NLQNFPHAAYNEMVVAPSNEQLSDAVREV---------------------------------------------VSRERVLLAFAILRSLSIDVGKIIVN

Query:  EISGCWKKKR------------MQEAR-------------------------------------------------QGELLYGINTILEQLALSASRQ--
        EI  C  +K              + AR                                                  G++L  +  + ++L+    +Q  
Subjt:  EISGCWKKKR------------MQEAR-------------------------------------------------QGELLYGINTILEQLALSASRQ--

Query:  -----EFAERQALTIWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL
             +   +Q    W Y K RD  LKKALQ NF++P P  PAFP+++L
Subjt:  -----EFAERQALTIWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL

RVW77775.1 Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera]6.4e-1161.9Show/hide
Query:  MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMINKE
        MA  E  L+I++FHQCSSL+SIKLN +N LLWRSQVLPLVRS G+IHHL+E+     E +  E
Subjt:  MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMINKE

RVX11446.1 hypothetical protein CK203_015972 [Vitis vinifera]1.1e-1061.9Show/hide
Query:  MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMINKE
        MA  E  L+I++FHQCSSL+SIKLN +N LLWRSQVLPLVRS G+IHHL+E+     E +  E
Subjt:  MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMINKE

XP_024932970.1 uncharacterized protein LOC112492813 [Ziziphus jujuba]1.7e-1157.53Show/hide
Query:  EVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEM-INKEVITYSTLLKAFIR
        E+ LTI+SFHQCSSLISIKL+ TNFLLWRSQ+ PLVRS G++HHL +D   + +   N+E I+   LL  ++R
Subjt:  EVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEM-INKEVITYSTLLKAFIR

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.9e-1424.07Show/hide
Query:  EIEESQLPYERFVNNFARAKYAELLKRDFLFERGFSGDLLHFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGIEVDWSPSAINALY
        E E +   YE  + N  R   AE   + F+ +   +   L F+   I  H W+ FCA PE     +VREFYAN+   +   V VRG++V WS  AINA++
Subjt:  EIEESQLPYERFVNNFARAKYAELLKRDFLFERGFSGDLLHFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGIEVDWSPSAINALY

Query:  NLQNFPHAAYNEMVVAPSNEQLSDAVREV---------------------------------------------VSRERVLLAFAILRSLSIDVGKIIVN
         L + P   ++E +   + + L   +  V                                             VS++R+LL  ++L   SI+VG++I +
Subjt:  NLQNFPHAAYNEMVVAPSNEQLSDAVREV---------------------------------------------VSRERVLLAFAILRSLSIDVGKIIVN

Query:  EISGCWKKKR------------MQEAR-------------------------------------------------QGELLYGINTILEQLALSASRQ--
        EI  C  +K              + AR                                                  G++L  +  + ++L+    +Q  
Subjt:  EISGCWKKKR------------MQEAR-------------------------------------------------QGELLYGINTILEQLALSASRQ--

Query:  -----EFAERQALTIWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL
             +   +Q    W Y K RD  LKKALQ NF++P P  PAFP+++L
Subjt:  -----EFAERQALTIWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAACAGAGGTGGCTCTTACTATTGAGTCGTTTCATCAGTGTTCTAGCTTAATTTCGATCAAGTTAAACACCACCAACTTCTTGTTATGGAGATCACAAGTATT
GCCCTTGGTAAGGAGTCCTGGAGTTATACATCACTTAACTGAAGATAGTCCTCCAAAAGCAGAAATGATCAACAAAGAAGTTATTACTTATAGCACCCTTCTGAAGGCAT
TTATCCGTGCAAAGAAGTTTGGTAAGCTCTATTTATTCCTACGCCTTCGCACCGAAAGTGAAGGCAAGAAGAAGAAGACACCAGAAGAAAAAAAAGCTAAAAGAAGAAGA
AGACAGCAGAGGGCTGAGGATCAAGAAGTTGTAGAGAAGGTGGTGGAAGACGTTGCTGCCACGGTGGTTGAAGAAGACCTGAAAGAACAAGAAGAACAAGACCCAGAGCA
GACTGGGCCAGGAGTTACGGATACAGAGGAAGTTCAAGAAGAAAACACTGAGGAGATTCAAGAAAAACAGGCTGAGGAGGTGCAGGAACATCATGCAGAGGTTGCACCTG
AAGAAGGTAACGAGCAAGAACAGGAGGCTCGAGTGGAGGTGATCATGCCGGAGGTACCCAAACGTCGCCGCATTAAAAGAAAAGCAGGTCGCGTCAAGGTAGTCCGAACT
GATACCCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGAAAGAGAGGAACAACAGAAGAAAGAAGCCGAGGAAAAAGCAAGAGAGGAAGTAGAGAAAAAGGC
TGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAGAGTGTTGCTGAAGCATCGGAAGAACCTGATGAAATAGAAGAGTCACAGTTGCCGTATGAGCGCTTCG
TCAACAATTTTGCCAGAGCAAAATATGCTGAGCTTCTGAAAAGAGATTTTTTGTTTGAGAGAGGATTTAGCGGTGATCTTCTGCATTTTCTAAGGACTGGTATTGCAGAC
CACGGTTGGGAGTTGTTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGAGG
AATCGAAGTAGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAAAATTTCCCCCACGCAGCGTATAATGAGATGGTTGTAGCGCCATCTAATGAGCAGCTAA
GCGATGCTGTACGGGAAGTGGTCTCTAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGAAAGATTATTGTTAATGAGATATCTGGT
TGTTGGAAGAAGAAGCGTATGCAAGAGGCACGTCAGGGTGAGCTTCTCTACGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCAGGAGTTTGCCGA
GAGGCAAGCTTTAACCATCTGGAACTATGTTAAGAGTCGTGATGCCAATCTGAAGAAGGCACTGCAGGAGAATTTTTCCAAGCCGTATCCAGCCCTTCCAGCCTTCCCTG
AAGATTTATTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGGAGGAGGGGATGATGAAAATGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAACAGAGGTGGCTCTTACTATTGAGTCGTTTCATCAGTGTTCTAGCTTAATTTCGATCAAGTTAAACACCACCAACTTCTTGTTATGGAGATCACAAGTATT
GCCCTTGGTAAGGAGTCCTGGAGTTATACATCACTTAACTGAAGATAGTCCTCCAAAAGCAGAAATGATCAACAAAGAAGTTATTACTTATAGCACCCTTCTGAAGGCAT
TTATCCGTGCAAAGAAGTTTGGTAAGCTCTATTTATTCCTACGCCTTCGCACCGAAAGTGAAGGCAAGAAGAAGAAGACACCAGAAGAAAAAAAAGCTAAAAGAAGAAGA
AGACAGCAGAGGGCTGAGGATCAAGAAGTTGTAGAGAAGGTGGTGGAAGACGTTGCTGCCACGGTGGTTGAAGAAGACCTGAAAGAACAAGAAGAACAAGACCCAGAGCA
GACTGGGCCAGGAGTTACGGATACAGAGGAAGTTCAAGAAGAAAACACTGAGGAGATTCAAGAAAAACAGGCTGAGGAGGTGCAGGAACATCATGCAGAGGTTGCACCTG
AAGAAGGTAACGAGCAAGAACAGGAGGCTCGAGTGGAGGTGATCATGCCGGAGGTACCCAAACGTCGCCGCATTAAAAGAAAAGCAGGTCGCGTCAAGGTAGTCCGAACT
GATACCCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGAAAGAGAGGAACAACAGAAGAAAGAAGCCGAGGAAAAAGCAAGAGAGGAAGTAGAGAAAAAGGC
TGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAGAGTGTTGCTGAAGCATCGGAAGAACCTGATGAAATAGAAGAGTCACAGTTGCCGTATGAGCGCTTCG
TCAACAATTTTGCCAGAGCAAAATATGCTGAGCTTCTGAAAAGAGATTTTTTGTTTGAGAGAGGATTTAGCGGTGATCTTCTGCATTTTCTAAGGACTGGTATTGCAGAC
CACGGTTGGGAGTTGTTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGAGG
AATCGAAGTAGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAAAATTTCCCCCACGCAGCGTATAATGAGATGGTTGTAGCGCCATCTAATGAGCAGCTAA
GCGATGCTGTACGGGAAGTGGTCTCTAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGAAAGATTATTGTTAATGAGATATCTGGT
TGTTGGAAGAAGAAGCGTATGCAAGAGGCACGTCAGGGTGAGCTTCTCTACGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCAGGAGTTTGCCGA
GAGGCAAGCTTTAACCATCTGGAACTATGTTAAGAGTCGTGATGCCAATCTGAAGAAGGCACTGCAGGAGAATTTTTCCAAGCCGTATCCAGCCCTTCCAGCCTTCCCTG
AAGATTTATTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGGAGGAGGGGATGATGAAAATGAGTAG
Protein sequenceShow/hide protein sequence
MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMINKEVITYSTLLKAFIRAKKFGKLYLFLRLRTESEGKKKKTPEEKKAKRRR
RQQRAEDQEVVEKVVEDVAATVVEEDLKEQEEQDPEQTGPGVTDTEEVQEENTEEIQEKQAEEVQEHHAEVAPEEGNEQEQEARVEVIMPEVPKRRRIKRKAGRVKVVRT
DTPSPPTTDSERENAEREEQQKKEAEEKAREEVEKKAEEERLLKRRAEKGKSVAEASEEPDEIEESQLPYERFVNNFARAKYAELLKRDFLFERGFSGDLLHFLRTGIAD
HGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGIEVDWSPSAINALYNLQNFPHAAYNEMVVAPSNEQLSDAVREVVSRERVLLAFAILRSLSIDVGKIIVNEISG
CWKKKRMQEARQGELLYGINTILEQLALSASRQEFAERQALTIWNYVKSRDANLKKALQENFSKPYPALPAFPEDLLNPWIPPPPMERGGGDDENE