; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018715 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018715
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold3:5218563..5223878
RNA-Seq ExpressionSpg018715
SyntenySpg018715
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033661.1 hypothetical protein E6C27_scaffold239G001280 [Cucumis melo var. makuwa]4.4e-4459.29Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        R E R +AH+V SIDR T +FE+ TG+SMISPYKGQ TQVV L + +C+CNKWQ++KIPCSHVIA CN +HL +  ++DE Y LS +++CY  +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG
         DYW E+ F  + PN  LL+  GRP+T+RI NEMDW+E+G
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG

KAA0044308.1 uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]1.6e-4660.71Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        RWE R +AH+V SIDR T +FE+ TG+SMISPYKGQ TQVV L + +C+CNKWQ++KIPCSHVIA CN +HL +  ++DE Y LS +++CY  +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG
         DYW E+ F  + PN  LL+  GRP+T+RIHNEMDW+E+G
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG

KAA0054037.1 uncharacterized protein E6C27_scaffold318G001000 [Cucumis melo var. makuwa]1.3e-4358.99Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        RWE R +AH+V SIDR T +FE+ TG+SMISPYKGQ TQVV L + +C+CNKWQ++KIPCSHVIA CN +HL +  ++DE Y LS +++CY  +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREA
         DY  E+ F  + PN  LL+  GRP+T+RIHN+MDW+E+
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREA

TYK02543.1 uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]3.6e-4660Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        +WE R +AH+V SIDR T +FE+ TG+SMISPYKGQ TQVV L + +C+CNKWQ++KIPCSHVIA CN +HL +  ++DE Y LS +++CY  +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG
         DYW E+ F  + PN  LL+  GRP+T+RIHNEMDW+E+G
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG

XP_031737534.1 uncharacterized protein LOC116402427 [Cucumis sativus]3.6e-4658.04Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        +WEKR +AH+V SIDR T +FE+ TG+SM SPYKGQ TQVV L + +C+CNKWQ++KIPCSHVIA CN +HL ++ ++DE Y LS ++RCY+ +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAGTKV
         DYW E+ F  + PN  LL+  GRP+T+RI NEMDW+E+   +
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAGTKV

TrEMBL top hitse value%identityAlignment
A0A5A7SW50 SWIM-type domain-containing protein2.1e-4459.29Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        R E R +AH+V SIDR T +FE+ TG+SMISPYKGQ TQVV L + +C+CNKWQ++KIPCSHVIA CN +HL +  ++DE Y LS +++CY  +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG
         DYW E+ F  + PN  LL+  GRP+T+RI NEMDW+E+G
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG

A0A5A7TN56 SWIM-type domain-containing protein7.9e-4760.71Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        RWE R +AH+V SIDR T +FE+ TG+SMISPYKGQ TQVV L + +C+CNKWQ++KIPCSHVIA CN +HL +  ++DE Y LS +++CY  +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG
         DYW E+ F  + PN  LL+  GRP+T+RIHNEMDW+E+G
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG

A0A5A7UHL3 SWIM-type domain-containing protein6.2e-4458.99Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        RWE R +AH+V SIDR T +FE+ TG+SMISPYKGQ TQVV L + +C+CNKWQ++KIPCSHVIA CN +HL +  ++DE Y LS +++CY  +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREA
         DY  E+ F  + PN  LL+  GRP+T+RIHN+MDW+E+
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREA

A0A5A7VDU8 SWIM-type domain-containing protein6.2e-4457.86Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        RWE R +AH+V SIDR T +FE+ T +SMISPYK Q TQVV L + +C+CNKW+++KIPCSHVIA CN +HL +  ++DE Y L  ++RCY  +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG
         DYW E+ F  + PN +LL+   RP+T+RIHNEMDW+E+G
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG

A0A5D3BS92 SWIM-type domain-containing protein1.7e-4660Show/hide
Query:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH
        +WE R +AH+V SIDR T +FE+ TG+SMISPYKGQ TQVV L + +C+CNKWQ++KIPCSHVIA CN +HL +  ++DE Y LS +++CY  +FHPIQH
Subjt:  RWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQH

Query:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG
         DYW E+ F  + PN  LL+  GRP+T+RIHNEMDW+E+G
Subjt:  RDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAG

SwissProt top hitse value%identityAlignment
Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog1.3e-1141.03Show/hide
Query:  QWHYPNRGLRQFGMRQMVPPYCDIGMELHQLDLRGKHDHDWRQHHAAFISLWRARRDHCVLGD-IVDMLAVSDDYLHW
        +WH P+R LRQFG+ Q +P  CD    LH +D RGK ++DW   H+  I LW AR    V G+     +  +D Y+ W
Subjt:  QWHYPNRGLRQFGMRQMVPPYCDIGMELHQLDLRGKHDHDWRQHHAAFISLWRARRDHCVLGD-IVDMLAVSDDYLHW

Arabidopsis top hitse value%identityAlignment
AT1G48120.1 hydrolases;protein serine/threonine phosphatases9.6e-1341.03Show/hide
Query:  QWHYPNRGLRQFGMRQMVPPYCDIGMELHQLDLRGKHDHDWRQHHAAFISLWRARRDHCVLGD-IVDMLAVSDDYLHW
        +WH P+R LRQFG+ Q +P  CD    LH +D RGK ++DW   H+  I LW AR    V G+     +  +D Y+ W
Subjt:  QWHYPNRGLRQFGMRQMVPPYCDIGMELHQLDLRGKHDHDWRQHHAAFISLWRARRDHCVLGD-IVDMLAVSDDYLHW

AT1G49920.1 MuDR family transposase4.9e-0934.33Show/hide
Query:  VVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQHRDYWLE
        +V L D +CTC ++Q  K PC H +A C+ + +  L +VD+ Y + +Y + Y ++F P+     W E
Subjt:  VVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQHRDYWLE

AT1G64255.1 MuDR family transposase7.1e-0837.31Show/hide
Query:  VVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQHRDYWLE
        +V L D SCTC  +Q YK PC H +A C  +    L +VD+ Y L + +R Y + F  +     W E
Subjt:  VVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQHRDYWLE

AT1G64260.1 MuDR family transposase1.9e-0831.76Show/hide
Query:  EIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQHRDYWLE
        ++E     +S    ++  +V L  ++CTC K+Q+YK PC H +A    + +  L +VDE Y + QY + Y + F P+     W E
Subjt:  EIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIPCSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQHRDYWLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCACGATTCCGGGGGTAAATCGCGTACCAGGTACGCGATTTCATAGCGAAATCATGAACCAGGTACGCGATTTCTTTGTTGGCACGCTGACTAGGCATTGTTGGCA
CCTGGTTGGCAGTGATGTGGCACAAGCAAACTCGTGTACCGGGAGGTGGGAAAAGAGAGTTGCTGCACATACTGTAAAGTCTATTGATAGAAGTACTTCAAGTTTTGAAA
TTGAAACGGGAATAAGTATGATTTCTCCATACAAGGGTCAGCAAACACAAGTGGTTTGCTTAAAAGACAACTCATGTACTTGTAACAAGTGGCAGACGTACAAGATCCCT
TGCTCCCATGTAATTGCAGCTTGTAACAACATTCATTTGGCACACTTACATTTTGTTGATGAAACATACAAACTATCACAATACCAGCGATGCTACGAAAGCCAATTCCA
TCCTATACAACATAGAGATTATTGGCTAGAGGTACAATTCGATATACTTCATCCAAACAAGCATTTGTTGAGGGAACATGGACGGCCAAAAACTTCACGAATTCATAATG
AGATGGATTGGCGAGAAGCTGGTACAAAAGTATGGAGCTCGTGTAGTGGACTTTGTAATGGATTTCGTAATGGTCTTTATAATGGATTTTGTAATGGATTTCGTAATGGT
CTTTATAATGGATTTTGTAATGGATTTTGTAATGGGCTTATATGGAACGGAATTTTGTCTGCATCTGAGCAGAGTACAAATATGTTGATTATGTATCGTATTACATTTGA
TCGTCTTATGTCCAACCAGTGGCATTATCCAAATCGAGGGCTGAGACAATTTGGAATGCGACAAATGGTGCCGCCATATTGTGATATAGGCATGGAGTTACATCAGTTGG
ACTTGCGAGGTAAGCACGATCACGATTGGCGACAACATCATGCAGCATTTATATCACTATGGCGTGCACGTCGTGATCATTGTGTCTTGGGCGATATAGTAGACATGCTA
GCTGTGTCTGATGACTACTTACACTGGAGGCTGACCGTTGCCGACACTGATCGGACACGTGCTTGTCGTAGACGTCGTCGACAACAGACTGCAGACATTCCACAACAGAA
CGAAGATGAAGAACCTCCTATAGTTGATGATGACACTTCAACTCTTCCTGTACAGTCACTGGCAGATCAGACAAACACTGCTTCAAGTTCTGGTCATGGTGACATAACTC
AACAAGATATTGATGATGTGATTCATCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCACGATTCCGGGGGTAAATCGCGTACCAGGTACGCGATTTCATAGCGAAATCATGAACCAGGTACGCGATTTCTTTGTTGGCACGCTGACTAGGCATTGTTGGCA
CCTGGTTGGCAGTGATGTGGCACAAGCAAACTCGTGTACCGGGAGGTGGGAAAAGAGAGTTGCTGCACATACTGTAAAGTCTATTGATAGAAGTACTTCAAGTTTTGAAA
TTGAAACGGGAATAAGTATGATTTCTCCATACAAGGGTCAGCAAACACAAGTGGTTTGCTTAAAAGACAACTCATGTACTTGTAACAAGTGGCAGACGTACAAGATCCCT
TGCTCCCATGTAATTGCAGCTTGTAACAACATTCATTTGGCACACTTACATTTTGTTGATGAAACATACAAACTATCACAATACCAGCGATGCTACGAAAGCCAATTCCA
TCCTATACAACATAGAGATTATTGGCTAGAGGTACAATTCGATATACTTCATCCAAACAAGCATTTGTTGAGGGAACATGGACGGCCAAAAACTTCACGAATTCATAATG
AGATGGATTGGCGAGAAGCTGGTACAAAAGTATGGAGCTCGTGTAGTGGACTTTGTAATGGATTTCGTAATGGTCTTTATAATGGATTTTGTAATGGATTTCGTAATGGT
CTTTATAATGGATTTTGTAATGGATTTTGTAATGGGCTTATATGGAACGGAATTTTGTCTGCATCTGAGCAGAGTACAAATATGTTGATTATGTATCGTATTACATTTGA
TCGTCTTATGTCCAACCAGTGGCATTATCCAAATCGAGGGCTGAGACAATTTGGAATGCGACAAATGGTGCCGCCATATTGTGATATAGGCATGGAGTTACATCAGTTGG
ACTTGCGAGGTAAGCACGATCACGATTGGCGACAACATCATGCAGCATTTATATCACTATGGCGTGCACGTCGTGATCATTGTGTCTTGGGCGATATAGTAGACATGCTA
GCTGTGTCTGATGACTACTTACACTGGAGGCTGACCGTTGCCGACACTGATCGGACACGTGCTTGTCGTAGACGTCGTCGACAACAGACTGCAGACATTCCACAACAGAA
CGAAGATGAAGAACCTCCTATAGTTGATGATGACACTTCAACTCTTCCTGTACAGTCACTGGCAGATCAGACAAACACTGCTTCAAGTTCTGGTCATGGTGACATAACTC
AACAAGATATTGATGATGTGATTCATCATTAA
Protein sequenceShow/hide protein sequence
MVTIPGVNRVPGTRFHSEIMNQVRDFFVGTLTRHCWHLVGSDVAQANSCTGRWEKRVAAHTVKSIDRSTSSFEIETGISMISPYKGQQTQVVCLKDNSCTCNKWQTYKIP
CSHVIAACNNIHLAHLHFVDETYKLSQYQRCYESQFHPIQHRDYWLEVQFDILHPNKHLLREHGRPKTSRIHNEMDWREAGTKVWSSCSGLCNGFRNGLYNGFCNGFRNG
LYNGFCNGFCNGLIWNGILSASEQSTNMLIMYRITFDRLMSNQWHYPNRGLRQFGMRQMVPPYCDIGMELHQLDLRGKHDHDWRQHHAAFISLWRARRDHCVLGDIVDML
AVSDDYLHWRLTVADTDRTRACRRRRRQQTADIPQQNEDEEPPIVDDDTSTLPVQSLADQTNTASSSGHGDITQQDIDDVIHH