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Spg018743 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018743
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase arkadia-like
Genome locationscaffold3:14217412..14217809
RNA-Seq ExpressionSpg018743
SyntenySpg018743
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596836.1 hypothetical protein SDJN03_10016, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0740Show/hide
Query:  MAGGEREINFLIAAIENYIQQTWI---------MEAFPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
        MA G  E+ F I A  +YIQ  W+          E   EEE+       E  ++ +    RRG PE A+ERL+KEK +   GE+LG+CS+C DEM
Subjt:  MAGGEREINFLIAAIENYIQQTWI---------MEAFPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
XP_023521698.1 E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]1.8e-0744.19Show/hide
Query:  MAGGEREINFLIAAIENYIQQTWIMEAFPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
        MA G  E+ F I A  +YIQ  W+ ++    E +G     ET I ++    RRG PE A+ERL+KEK +   GE+LG+CS+C DEM
Subjt:  MAGGEREINFLIAAIENYIQQTWIMEAFPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
XP_023539471.1 uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo]3.1e-0742.71Show/hide
Query:  MAGGEREINFLIAAIENYIQQTWI----MEAFPEEENNGGAVGNETVILEETRV------ARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
        MA G  E+ F I A  +YIQ  W+    + A  EEE        E    EE  V       RRG PE A+ERL+KEK +   GE+LG+CS+C DEM
Subjt:  MAGGEREINFLIAAIENYIQQTWI----MEAFPEEENNGGAVGNETVILEETRV------ARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
XP_023539480.1 E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]3.1e-0744.94Show/hide
Query:  MAGGEREINFLIAAIENYIQQTWIME---AFPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
        MA G  E+ F I A  +YIQ  W+ +   A  EEE+       ET I ++    RRG PE A+ERL+KEK +   GE+LG+CS+C DEM
Subjt:  MAGGEREINFLIAAIENYIQQTWIME---AFPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
XP_023539485.1 RING-H2 finger protein ATL80-like [Cucurbita pepo subsp. pepo]6.3e-0842.05Show/hide
Query:  MAGGEREINFLIAAIENYIQQTWIMEA--FPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
        MA G  E+ F I A  +YIQ  W+ ++    EEE        E  ++ +    RRG PE A+ERL+KEK +   GE+LG+CS+C DEM
Subjt:  MAGGEREINFLIAAIENYIQQTWIMEA--FPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
TrEMBL top hitse value%identityAlignment
A0A6J1EKL4 E3 ubiquitin-protein ligase arkadia-like4.6e-0435.23Show/hide
Query:  MAGGEREINFLIAAIENYIQQTWI--MEAFPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
        ++ G RE +F I    ++IQ  W+  +    + + NGG +  ETV+L+E    RR        R    ++E +  +ELGDC ICLDEM
Subjt:  MAGGEREINFLIAAIENYIQQTWI--MEAFPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGCGGAGAAAGAGAGATAAACTTCCTCATCGCCGCCATCGAGAATTACATCCAACAGACCTGGATAATGGAGGCATTCCCCGAGGAAGAGAACAATGGCGGTGC
AGTGGGGAATGAGACGGTGATTCTGGAAGAAACTCGGGTGGCAAGGAGGGGAATGCCGGAGTGGGCGATGGAGAGGCTAAGGAAGGAGAAATTGGAAGATCAGAATGGGG
AAGAATTGGGAGATTGCAGTATCTGTTTGGATGAAATGAATTGGAATTGGAATTGCAGGAGAAGGAGAAGGCCACTGTCATTGGAGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGCGGAGAAAGAGAGATAAACTTCCTCATCGCCGCCATCGAGAATTACATCCAACAGACCTGGATAATGGAGGCATTCCCCGAGGAAGAGAACAATGGCGGTGC
AGTGGGGAATGAGACGGTGATTCTGGAAGAAACTCGGGTGGCAAGGAGGGGAATGCCGGAGTGGGCGATGGAGAGGCTAAGGAAGGAGAAATTGGAAGATCAGAATGGGG
AAGAATTGGGAGATTGCAGTATCTGTTTGGATGAAATGAATTGGAATTGGAATTGCAGGAGAAGGAGAAGGCCACTGTCATTGGAGGACTGA
Protein sequenceShow/hide protein sequence
MAGGEREINFLIAAIENYIQQTWIMEAFPEEENNGGAVGNETVILEETRVARRGMPEWAMERLRKEKLEDQNGEELGDCSICLDEMNWNWNCRRRRRPLSLED