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Spg018758 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018758
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold3:4653234..4653982
RNA-Seq ExpressionSpg018758
SyntenySpg018758
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041933.1 hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa]2.2e-1041.67Show/hide
Query:  MKEALKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAFAY
        ++ ALK VA  G +W  + T+   L  +NL  E ++WL F K ++IP  H+  IS+ER+ML+Y IM+ + +NIG II E I++W   L  A  F+Y
Subjt:  MKEALKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAFAY

KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]5.8e-1146.43Show/hide
Query:  MKEALKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSW
        M+ AL+ VA  G++W  +  K   L P+NLK  ++VWL FIK  L+P  H++TIS+ER+MLLY IM+ + +N+  II E I +W
Subjt:  MKEALKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSW

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]3.8e-1041.11Show/hide
Query:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAF
        L+ VA  G +W  S+  V T + ++L P + +W HF+K+RL+P TH   +S ERV+LLYS++ G  IN+G +I  +I +     S AL F
Subjt:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAF

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.2e-1143.33Show/hide
Query:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAF
        L+ VA  G +W  S+    T + ++L P + VW HF+K+RL+P TH  T+S ERV+LLYS++ G  IN+G II  +I ++    S AL F
Subjt:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAF

PON71279.1 hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii]2.9e-1038.71Show/hide
Query:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAFAYQ
        L+ +A  G +W  S+      + ++L P + VW HF+K+RL+P TH  T+S ERV+LLYS++ G  IN+G +I+ +I       S AL F+++
Subjt:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAFAYQ

TrEMBL top hitse value%identityAlignment
A0A2P5BNT0 Uncharacterized protein (Fragment)1.8e-1041.11Show/hide
Query:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAF
        L+ VA  G +W  S+  V T + ++L P + +W HF+K+RL+P TH   +S ERV+LLYS++ G  IN+G +I  +I +     S AL F
Subjt:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAF

A0A2P5CPE8 Uncharacterized protein5.7e-1243.33Show/hide
Query:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAF
        L+ VA  G +W  S+    T + ++L P + VW HF+K+RL+P TH  T+S ERV+LLYS++ G  IN+G II  +I ++    S AL F
Subjt:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAF

A0A2P5DDA9 Uncharacterized protein (Fragment)1.4e-1038.71Show/hide
Query:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAFAYQ
        L+ +A  G +W  S+      + ++L P + VW HF+K+RL+P TH  T+S ERV+LLYS++ G  IN+G +I+ +I       S AL F+++
Subjt:  LKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAFAYQ

A0A5A7TZE0 Protein MNN4-like2.8e-1146.43Show/hide
Query:  MKEALKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSW
        M+ AL+ VA  G++W  +  K   L P+NLK  ++VWL FIK  L+P  H++TIS+ER+MLLY IM+ + +N+  II E I +W
Subjt:  MKEALKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSW

A0A5D3D2B5 Uncharacterized protein1.1e-1041.67Show/hide
Query:  MKEALKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAFAY
        ++ ALK VA  G +W  + T+   L  +NL  E ++WL F K ++IP  H+  IS+ER+ML+Y IM+ + +NIG II E I++W   L  A  F+Y
Subjt:  MKEALKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAFAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAGCGCTAAAAATGGTGGCCAACAAGGGTGTTCAATGGAAGGAATCCACGACTAAAGTGAAGACATTAGTGCCTAACAATCTCAAGCCTGAATCTGCAGTATG
GCTTCACTTTATAAAGAACAGATTGATTCCAGCAACCCACAACAGCACTATTTCAGTAGAGAGAGTTATGCTCCTCTATAGTATCATGAAGGGGTTGGAGATAAATATCG
GGAGCATCATCAGGGAGAAGATTCTTTCGTGGCCTACACCATTATCTGAGGCTCTAGCATTTGCCTACCAACAACTGGACCAAATTAGGGATAACCTGAGGACTTATTCG
GCTTATGCTAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACTTCGCTATTCCCCGGAGTATTGCTCCTGTCTTTCCTGACTTCCCTCAATCGTTGTTGCCTCAAGAAGA
AAAGGTATCTGAAGATGAAGATGACAATGAAGATGAAGAGAAAGAGATGCCCTCAAATGAGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAGCGCTAAAAATGGTGGCCAACAAGGGTGTTCAATGGAAGGAATCCACGACTAAAGTGAAGACATTAGTGCCTAACAATCTCAAGCCTGAATCTGCAGTATG
GCTTCACTTTATAAAGAACAGATTGATTCCAGCAACCCACAACAGCACTATTTCAGTAGAGAGAGTTATGCTCCTCTATAGTATCATGAAGGGGTTGGAGATAAATATCG
GGAGCATCATCAGGGAGAAGATTCTTTCGTGGCCTACACCATTATCTGAGGCTCTAGCATTTGCCTACCAACAACTGGACCAAATTAGGGATAACCTGAGGACTTATTCG
GCTTATGCTAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACTTCGCTATTCCCCGGAGTATTGCTCCTGTCTTTCCTGACTTCCCTCAATCGTTGTTGCCTCAAGAAGA
AAAGGTATCTGAAGATGAAGATGACAATGAAGATGAAGAGAAAGAGATGCCCTCAAATGAGGATTAG
Protein sequenceShow/hide protein sequence
MKEALKMVANKGVQWKESTTKVKTLVPNNLKPESAVWLHFIKNRLIPATHNSTISVERVMLLYSIMKGLEINIGSIIREKILSWPTPLSEALAFAYQQLDQIRDNLRTYS
AYAKERDEAIREFYFAIPRSIAPVFPDFPQSLLPQEEKVSEDEDDNEDEEKEMPSNED