; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018769 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018769
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold3:19703568..19711160
RNA-Seq ExpressionSpg018769
SyntenySpg018769
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039949.1 hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa]1.1e-0940.16Show/hide
Query:  SKETKKPTLAPISPPVDSTLA------SVKLETSIIVYRKHFHDDWYK-ISRALQHTGHFCS---MNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFS
        SK    P+L    P + S +        +  E SII+ R+ FHDDW K I R    T    S     PF  DKALL  +++E   +LC    W  VGPF 
Subjt:  SKETKKPTLAPISPPVDSTLA------SVKLETSIIVYRKHFHDDWYK-ISRALQHTGHFCS---MNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFS

Query:  LRFSRWSKDAHSFT-VGPSYGG
        ++F +WSK+AH+ T V PSYGG
Subjt:  LRFSRWSKDAHSFT-VGPSYGG

KAA0039967.1 hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]1.1e-0939.58Show/hide
Query:  STLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG
        +T+ S + E ++++ R+ FHDDW +I   L +         PF  DKAL+  + EEQ ++LC  K W  VG F ++F  WS+  H S  V PSYGG
Subjt:  STLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG

KAA0051807.1 hypothetical protein E6C27_scaffold60G002200 [Cucumis melo var. makuwa]1.9e-0938.14Show/hide
Query:  DSTLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG
        D T  +++ E ++++ R++FHDDW  I   L +      S  PF  DKAL+  ++ EQ  ++C  K W  VG F ++F  W++ AH S  V PSYGG
Subjt:  DSTLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG

TYK05762.1 cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. makuwa]1.5e-0935.34Show/hide
Query:  LSKETKKPTLAPISPPVDSTLASVKLETS--IIVYRKHFHDDWYKISRALQ-HTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRW
        LS + +   +  +   V    A + L+ +  +++ R++FHDDW KI   L+    H  S  PF  DKAL+  +++EQ  ++C  K W  VG F ++F  W
Subjt:  LSKETKKPTLAPISPPVDSTLASVKLETS--IIVYRKHFHDDWYKISRALQ-HTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRW

Query:  SKDAH-SFTVGPSYGG
        ++ AH S  V PSYGG
Subjt:  SKDAH-SFTVGPSYGG

TYK24535.1 hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa]1.1e-0939.58Show/hide
Query:  STLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG
        +T+ S + E ++++ R+ FHDDW +I   L +         PF  DKAL+  + EEQ ++LC  K W  VG F ++F  WS+  H S  V PSYGG
Subjt:  STLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG

TrEMBL top hitse value%identityAlignment
A0A5A7TEK8 DUF4283 domain-containing protein5.5e-1039.58Show/hide
Query:  STLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG
        +T+ S + E ++++ R+ FHDDW +I   L +         PF  DKAL+  + EEQ ++LC  K W  VG F ++F  WS+  H S  V PSYGG
Subjt:  STLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG

A0A5D3C3G6 Cleavage and polyadenylation specificity factor subunit 17.2e-1035.34Show/hide
Query:  LSKETKKPTLAPISPPVDSTLASVKLETS--IIVYRKHFHDDWYKISRALQ-HTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRW
        LS + +   +  +   V    A + L+ +  +++ R++FHDDW KI   L+    H  S  PF  DKAL+  +++EQ  ++C  K W  VG F ++F  W
Subjt:  LSKETKKPTLAPISPPVDSTLASVKLETS--IIVYRKHFHDDWYKISRALQ-HTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRW

Query:  SKDAH-SFTVGPSYGG
        ++ AH S  V PSYGG
Subjt:  SKDAH-SFTVGPSYGG

A0A5D3DCX6 DUF4283 domain-containing protein9.4e-1038.14Show/hide
Query:  DSTLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG
        D T  +++ E ++++ R++FHDDW  I   L +      S  PF  DKAL+  ++ EQ  ++C  K W  VG F ++F  W++ AH S  V PSYGG
Subjt:  DSTLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG

A0A5D3DLP0 DUF4283 domain-containing protein5.5e-1039.58Show/hide
Query:  STLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG
        +T+ S + E ++++ R+ FHDDW +I   L +         PF  DKAL+  + EEQ ++LC  K W  VG F ++F  WS+  H S  V PSYGG
Subjt:  STLASVKLETSIIVYRKHFHDDWYKISRAL-QHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAH-SFTVGPSYGG

A0A5D3DLT1 DUF4283 domain-containing protein5.5e-1040.16Show/hide
Query:  SKETKKPTLAPISPPVDSTLA------SVKLETSIIVYRKHFHDDWYK-ISRALQHTGHFCS---MNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFS
        SK    P+L    P + S +        +  E SII+ R+ FHDDW K I R    T    S     PF  DKALL  +++E   +LC    W  VGPF 
Subjt:  SKETKKPTLAPISPPVDSTLA------SVKLETSIIVYRKHFHDDWYK-ISRALQHTGHFCS---MNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFS

Query:  LRFSRWSKDAHSFT-VGPSYGG
        ++F +WSK+AH+ T V PSYGG
Subjt:  LRFSRWSKDAHSFT-VGPSYGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAAGATGCTTTATCTAAAGAGACAAAGAAGCCCACATTGGCACCGATTTCTCCACCTGTGGACTCGACCTTAGCCTCAGTAAAGCTGGAAACATCTATTATCGT
CTATAGGAAACATTTCCATGATGATTGGTACAAGATTTCGAGAGCCTTACAACACACGGGCCACTTTTGCTCAATGAACCCATTTGAAATGGACAAAGCCCTTCTCAAGT
CTGAAGAAGAAGAACAAGTAGAGATCCTATGCTCTACCAAAGATTGGCATCGAGTGGGTCCCTTCTCACTTAGGTTCTCAAGGTGGTCAAAAGATGCCCATAGTTTCACC
GTTGGCCCCTCCTATGGAGGGCTCCATACCACTAGTGATATCCTTCGACAAAGACCTACCGGCCCAAAGCTTGATGTTGACAAATTAGACAATATTTTGGGATTGTACCC
TCAAGCAGAGGCATATGATATGCGGTTTAATTCTATGCTAGCTACATCACATACTTTGATTGTAGGAAGACTGGCTATATCCCTTGCATTTGTTCCAACTGATGTTCAGT
TGTCAAACTCTCCCTCTCTCCTGACTTTTCTTTTGACCACCCCTGCATTTGAATCGCCTTTTGCCTTCTTGGAGAGCGAGATGGACCCACCTACCCTTGATATTGACCTG
ACCTTTGCTCTATGCACCAAAAATACTACCTTTGCTCCTATTGAAGGCACTAACATTGACGACTATGTGTTTGACCCTTATCCTTCTTCTTCTCCACCTTCCCCAACTTC
TACGGTACCCAAATCTCTGGTTATTATCCCCACTAGTCAAGACACTCCACCATCTGATCCTCTTATGCTCAAAGGGATTGAATTGGGTCGAATATTGCTTGAAAGTGATT
TGCAACCATTGGATCCCTCGATATATCTTCACTATTTAGTCCCTTGGTTGGAGAAGAAGCGTCCAAGCATCATGCCAATTCTATCAGCAACCAAGAAACCAAAGACAACA
CAAAAACAAAATAAAGGGTTGGGATCATGGGAGAAGCGGGCTCTTGTTAAATCTCTTATCCTCAAGTACAACCTGAATGTTGTTATTCTTCAAGAAACAAAAGTGGTTGT
TGTGGATGGACTCATCATAAATCTCTTTGAAGTTCTCGACATATTGGATGGTTTTCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATAAAGATGCTTTATCTAAAGAGACAAAGAAGCCCACATTGGCACCGATTTCTCCACCTGTGGACTCGACCTTAGCCTCAGTAAAGCTGGAAACATCTATTATCGT
CTATAGGAAACATTTCCATGATGATTGGTACAAGATTTCGAGAGCCTTACAACACACGGGCCACTTTTGCTCAATGAACCCATTTGAAATGGACAAAGCCCTTCTCAAGT
CTGAAGAAGAAGAACAAGTAGAGATCCTATGCTCTACCAAAGATTGGCATCGAGTGGGTCCCTTCTCACTTAGGTTCTCAAGGTGGTCAAAAGATGCCCATAGTTTCACC
GTTGGCCCCTCCTATGGAGGGCTCCATACCACTAGTGATATCCTTCGACAAAGACCTACCGGCCCAAAGCTTGATGTTGACAAATTAGACAATATTTTGGGATTGTACCC
TCAAGCAGAGGCATATGATATGCGGTTTAATTCTATGCTAGCTACATCACATACTTTGATTGTAGGAAGACTGGCTATATCCCTTGCATTTGTTCCAACTGATGTTCAGT
TGTCAAACTCTCCCTCTCTCCTGACTTTTCTTTTGACCACCCCTGCATTTGAATCGCCTTTTGCCTTCTTGGAGAGCGAGATGGACCCACCTACCCTTGATATTGACCTG
ACCTTTGCTCTATGCACCAAAAATACTACCTTTGCTCCTATTGAAGGCACTAACATTGACGACTATGTGTTTGACCCTTATCCTTCTTCTTCTCCACCTTCCCCAACTTC
TACGGTACCCAAATCTCTGGTTATTATCCCCACTAGTCAAGACACTCCACCATCTGATCCTCTTATGCTCAAAGGGATTGAATTGGGTCGAATATTGCTTGAAAGTGATT
TGCAACCATTGGATCCCTCGATATATCTTCACTATTTAGTCCCTTGGTTGGAGAAGAAGCGTCCAAGCATCATGCCAATTCTATCAGCAACCAAGAAACCAAAGACAACA
CAAAAACAAAATAAAGGGTTGGGATCATGGGAGAAGCGGGCTCTTGTTAAATCTCTTATCCTCAAGTACAACCTGAATGTTGTTATTCTTCAAGAAACAAAAGTGGTTGT
TGTGGATGGACTCATCATAAATCTCTTTGAAGTTCTCGACATATTGGATGGTTTTCATTAG
Protein sequenceShow/hide protein sequence
MYKDALSKETKKPTLAPISPPVDSTLASVKLETSIIVYRKHFHDDWYKISRALQHTGHFCSMNPFEMDKALLKSEEEEQVEILCSTKDWHRVGPFSLRFSRWSKDAHSFT
VGPSYGGLHTTSDILRQRPTGPKLDVDKLDNILGLYPQAEAYDMRFNSMLATSHTLIVGRLAISLAFVPTDVQLSNSPSLLTFLLTTPAFESPFAFLESEMDPPTLDIDL
TFALCTKNTTFAPIEGTNIDDYVFDPYPSSSPPSPTSTVPKSLVIIPTSQDTPPSDPLMLKGIELGRILLESDLQPLDPSIYLHYLVPWLEKKRPSIMPILSATKKPKTT
QKQNKGLGSWEKRALVKSLILKYNLNVVILQETKVVVVDGLIINLFEVLDILDGFH