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Spg018777 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018777
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold3:4439085..4440704
RNA-Seq ExpressionSpg018777
SyntenySpg018777
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047641.1 uncharacterized protein E6C27_scaffold115G001240 [Cucumis melo var. makuwa]1.0e-0326.32Show/hide
Query:  SRDNDGSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPSASQFPALLTLLSPLNDPLIEAEGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQ------
        S   + SQS++ D HWKRPK+  + S+ +++    VP   QF  + + +S L D +++ EG  +  S  SP+V  +      N K P+D +V        
Subjt:  SRDNDGSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPSASQFPALLTLLSPLNDPLIEAEGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQ------

Query:  -----------SCHPFSLEKILYSESELLTTKGILQQQHLQALREEEELEAKREAVKA---------------------------SIEDAPILTDADAKT
                    C PF    +  +E+ +L     +Q +  +   +E +LEAK + V+                             +E API+ DAD K 
Subjt:  -----------SCHPFSLEKILYSESELLTTKGILQQQHLQALREEEELEAKREAVKA---------------------------SIEDAPILTDADAKT

Query:  LTILRGMLE
        L  LR  LE
Subjt:  LTILRGMLE

TrEMBL top hitse value%identityAlignment
A0A1S4E6N4 uncharacterized protein LOC1035041696.3e-0431.13Show/hide
Query:  DELFDGVPSASQFPALLTLLSPLNDPLIEAEGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQ-SCHPFSLE-KILYSESELLTTKGILQQQHLQALR
        D  F GV + +Q  + + L S  +  LIEA+G      FV     D    R+    + + R + + S     LE K+    +E     GI+ +  ++  +
Subjt:  DELFDGVPSASQFPALLTLLSPLNDPLIEAEGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQ-SCHPFSLE-KILYSESELLTTKGILQQQHLQALR

Query:  EEEELEAKREAVKASIEDAPILTDADAKTLTILRGMLEDAQEELKNYKWMP
        ++ E+    E +   +E API+ D DAK L+ LR  LE+  EELKN KW P
Subjt:  EEEELEAKREAVKASIEDAPILTDADAKTLTILRGMLEDAQEELKNYKWMP

A0A5A7SWI5 Uncharacterized protein6.3e-0431.13Show/hide
Query:  DELFDGVPSASQFPALLTLLSPLNDPLIEAEGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQ-SCHPFSLE-KILYSESELLTTKGILQQQHLQALR
        D  F GV + +Q  + + L S  +  LIEA+G      FV     D    R+    + + R + + S     LE K+    +E     GI+ +  ++  +
Subjt:  DELFDGVPSASQFPALLTLLSPLNDPLIEAEGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQ-SCHPFSLE-KILYSESELLTTKGILQQQHLQALR

Query:  EEEELEAKREAVKASIEDAPILTDADAKTLTILRGMLEDAQEELKNYKWMP
        ++ E+    E +   +E API+ D DAK L+ LR  LE+  EELKN KW P
Subjt:  EEEELEAKREAVKASIEDAPILTDADAKTLTILRGMLEDAQEELKNYKWMP

A0A5A7U231 Uncharacterized protein4.8e-0426.32Show/hide
Query:  SRDNDGSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPSASQFPALLTLLSPLNDPLIEAEGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQ------
        S   + SQS++ D HWKRPK+  + S+ +++    VP   QF  + + +S L D +++ EG  +  S  SP+V  +      N K P+D +V        
Subjt:  SRDNDGSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPSASQFPALLTLLSPLNDPLIEAEGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQ------

Query:  -----------SCHPFSLEKILYSESELLTTKGILQQQHLQALREEEELEAKREAVKA---------------------------SIEDAPILTDADAKT
                    C PF    +  +E+ +L     +Q +  +   +E +LEAK + V+                             +E API+ DAD K 
Subjt:  -----------SCHPFSLEKILYSESELLTTKGILQQQHLQALREEEELEAKREAVKA---------------------------SIEDAPILTDADAKT

Query:  LTILRGMLE
        L  LR  LE
Subjt:  LTILRGMLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGCCTAGTGAATTTCGTTCTAGGGATAATGATGGTAGTCAGAGCAGTAGCGGCGATCATCATTGGAAAAGGCCTAAAAAGTCCAATCAACCATCAGTATGTGA
AGATGAACTTTTTGATGGAGTTCCCAGCGCATCACAATTTCCTGCACTCCTTACACTACTGTCACCTTTAAATGATCCCCTTATAGAAGCCGAGGGGCATCACAGTCCTC
CTTCTTTTGTGAGTCCAGATGTTTTTGATTCTGTAGCTACGCGTGTGGGCAATTTCAAAGCGCCAATGGATAGAGTTGTGACTCAATCTTGTCATCCTTTTAGCTTGGAG
AAGATACTATATAGTGAAAGTGAACTACTCACGACGAAGGGTATACTTCAGCAACAACATTTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAAGCGTGAAGCTGT
GAAAGCTAGTATTGAAGATGCCCCTATTCTTACTGATGCTGATGCTAAAACGCTGACGATACTTCGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGT
GGATGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAGCCTAGTGAATTTCGTTCTAGGGATAATGATGGTAGTCAGAGCAGTAGCGGCGATCATCATTGGAAAAGGCCTAAAAAGTCCAATCAACCATCAGTATGTGA
AGATGAACTTTTTGATGGAGTTCCCAGCGCATCACAATTTCCTGCACTCCTTACACTACTGTCACCTTTAAATGATCCCCTTATAGAAGCCGAGGGGCATCACAGTCCTC
CTTCTTTTGTGAGTCCAGATGTTTTTGATTCTGTAGCTACGCGTGTGGGCAATTTCAAAGCGCCAATGGATAGAGTTGTGACTCAATCTTGTCATCCTTTTAGCTTGGAG
AAGATACTATATAGTGAAAGTGAACTACTCACGACGAAGGGTATACTTCAGCAACAACATTTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAAGCGTGAAGCTGT
GAAAGCTAGTATTGAAGATGCCCCTATTCTTACTGATGCTGATGCTAAAACGCTGACGATACTTCGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGT
GGATGCCGTGA
Protein sequenceShow/hide protein sequence
MFEPSEFRSRDNDGSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPSASQFPALLTLLSPLNDPLIEAEGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQSCHPFSLE
KILYSESELLTTKGILQQQHLQALREEEELEAKREAVKASIEDAPILTDADAKTLTILRGMLEDAQEELKNYKWMP