; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018779 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018779
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionthylakoidal processing peptidase 1, chloroplastic-like
Genome locationscaffold3:18883148..18894344
RNA-Seq ExpressionSpg018779
SyntenySpg018779
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016020 - membrane (cellular component)
GO:0008236 - serine-type peptidase activity (molecular function)
InterPro domainsIPR000223 - Peptidase S26A, signal peptidase I


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144217.1 thylakoidal processing peptidase 1, chloroplastic-like [Momordica charantia]5.3e-2855.92Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG-------------------------------------------DESGSNHFYETDFEKSNWVSG
        MVGEN KSP+VLGLM ML+ + S SG SSI+T IFG                                           D  GSN  YE DFEKS+WVS 
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG-------------------------------------------DESGSNHFYETDFEKSNWVSG

Query:  LLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        LLSTYS+DAKALFTALTVSVLFKSFL EPKSIPS S+YPTLEVGD VLA+KV
Subjt:  LLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

XP_022951822.1 thylakoidal processing peptidase 1, chloroplastic-like isoform X1 [Cucurbita moschata]9.9e-2754.3Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG------------------------------------------DESGSNHFYETDFEKSNWVSGL
        MVGEN KSPM+LGL+ ML+ M S S  S I T I G                                          DESGS+ FYE+DFEKS+WVS L
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG------------------------------------------DESGSNHFYETDFEKSNWVSGL

Query:  LSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        L+TYS DAKALFTALTVSVLFKSFL EPKSIPS S+YPTLE GD VLA+KV
Subjt:  LSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

XP_022951823.1 thylakoidal processing peptidase 1, chloroplastic-like isoform X2 [Cucurbita moschata]5.8e-2759.26Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG--------------------------DESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALT
        MVGEN KSPM+LGL+ ML+ M S S  S I T I G                            SGS+ FYE+DFEKS+WVS LL+TYS DAKALFTALT
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG--------------------------DESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALT

Query:  VSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        VSVLFKSFL EPKSIPS S+YPTLE GD VLA+KV
Subjt:  VSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

XP_023002003.1 thylakoidal processing peptidase 1, chloroplastic-like [Cucurbita maxima]6.9e-2860Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG--------------------------DESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALT
        MVGEN KSPM+LGL+ ML+ M S SG S  ST I G                            SGS+ FYE+DFEKS+WVS LL+TYS DAKALFTALT
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG--------------------------DESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALT

Query:  VSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        VSVLFKSFL EPKSIPS S+YPTLE GD VLA+KV
Subjt:  VSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

XP_023537459.1 thylakoidal processing peptidase 1, chloroplastic-like [Cucurbita pepo subsp. pepo]2.6e-2754.97Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG------------------------------------------DESGSNHFYETDFEKSNWVSGL
        MVGEN KSPM+LGL+ ML+ M S S  S IST I G                                          DESGS+ FYE+DFEKS+WVS L
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG------------------------------------------DESGSNHFYETDFEKSNWVSGL

Query:  LSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        L+TYS DAKALFTALTVSVLFKSFL EPKSIPS S+YPTLE GD VLA+KV
Subjt:  LSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

TrEMBL top hitse value%identityAlignment
A0A5A7VHF7 Thylakoidal processing peptidase 12.2e-2451.66Show/hide
Query:  VGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG-------------------------------------------DESGSNHFYETDFEKSNWVSGL
        VGE+ K+PM+LGLM ML+ MG +   S IST  FG                                           D+SG+N FYE DFEKS+WVS L
Subjt:  VGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG-------------------------------------------DESGSNHFYETDFEKSNWVSGL

Query:  LSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        L+TYS+DAKALFTALTVSVLFKSFL EPKSIPS S+ PTLEVGD +LA+KV
Subjt:  LSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

A0A6J1CT20 thylakoidal processing peptidase 1, chloroplastic-like2.5e-2855.92Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG-------------------------------------------DESGSNHFYETDFEKSNWVSG
        MVGEN KSP+VLGLM ML+ + S SG SSI+T IFG                                           D  GSN  YE DFEKS+WVS 
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG-------------------------------------------DESGSNHFYETDFEKSNWVSG

Query:  LLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        LLSTYS+DAKALFTALTVSVLFKSFL EPKSIPS S+YPTLEVGD VLA+KV
Subjt:  LLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

A0A6J1GIQ5 thylakoidal processing peptidase 1, chloroplastic-like isoform X14.8e-2754.3Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG------------------------------------------DESGSNHFYETDFEKSNWVSGL
        MVGEN KSPM+LGL+ ML+ M S S  S I T I G                                          DESGS+ FYE+DFEKS+WVS L
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG------------------------------------------DESGSNHFYETDFEKSNWVSGL

Query:  LSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        L+TYS DAKALFTALTVSVLFKSFL EPKSIPS S+YPTLE GD VLA+KV
Subjt:  LSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

A0A6J1GIT4 thylakoidal processing peptidase 1, chloroplastic-like isoform X22.8e-2759.26Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG--------------------------DESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALT
        MVGEN KSPM+LGL+ ML+ M S S  S I T I G                            SGS+ FYE+DFEKS+WVS LL+TYS DAKALFTALT
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG--------------------------DESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALT

Query:  VSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        VSVLFKSFL EPKSIPS S+YPTLE GD VLA+KV
Subjt:  VSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

A0A6J1KS79 thylakoidal processing peptidase 1, chloroplastic-like3.3e-2860Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG--------------------------DESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALT
        MVGEN KSPM+LGL+ ML+ M S SG S  ST I G                            SGS+ FYE+DFEKS+WVS LL+TYS DAKALFTALT
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG--------------------------DESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALT

Query:  VSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        VSVLFKSFL EPKSIPS S+YPTLE GD VLA+KV
Subjt:  VSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

SwissProt top hitse value%identityAlignment
O04348 Thylakoidal processing peptidase 1, chloroplastic9.1e-1539.72Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG----------------------------DESGSNHFYETDFEKSN----WVSGLLSTYSKDAKA
        ++GE  +SP+V+GL+ +L+   ST+G  S +  + G                            D+ G+    + D E  N    WV+ LLS  S+DAKA
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG----------------------------DESGSNHFYETDFEKSN----WVSGLLSTYSKDAKA

Query:  LFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
         FTA+TVS+LF+S L EPKSIPS S+YPTL+ GD V+A+KV
Subjt:  LFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

Q8H0W1 Chloroplast processing peptidase9.1e-0736.27Show/hide
Query:  GDESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKVILTSLSVCTVSLTSAPHAIVFSREPP
        G + G +   E + EK+      L   S DA+ +F A+ VS+ F+ F+ EP+ IPSLS+YPT +VGD ++A+KV       C        + IV  + PP
Subjt:  GDESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKVILTSLSVCTVSLTSAPHAIVFSREPP

Query:  PL
         L
Subjt:  PL

Q9M9Z2 Probable thylakoidal processing peptidase 2, chloroplastic5.5e-1263.79Show/hide
Query:  SNWVSGLLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        + WV+ LL+  S+DAKA FTA+TVS+LF+S L EPKSIPS S+ PTL+VGD V+A+KV
Subjt:  SNWVSGLLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

Arabidopsis top hitse value%identityAlignment
AT1G06870.1 Peptidase S24/S26A/S26B/S26C family protein3.9e-1363.79Show/hide
Query:  SNWVSGLLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
        + WV+ LL+  S+DAKA FTA+TVS+LF+S L EPKSIPS S+ PTL+VGD V+A+KV
Subjt:  SNWVSGLLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

AT2G30440.1 thylakoid processing peptide6.4e-1639.72Show/hide
Query:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG----------------------------DESGSNHFYETDFEKSN----WVSGLLSTYSKDAKA
        ++GE  +SP+V+GL+ +L+   ST+G  S +  + G                            D+ G+    + D E  N    WV+ LLS  S+DAKA
Subjt:  MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFG----------------------------DESGSNHFYETDFEKSN----WVSGLLSTYSKDAKA

Query:  LFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV
         FTA+TVS+LF+S L EPKSIPS S+YPTL+ GD V+A+KV
Subjt:  LFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKV

AT3G24590.1 plastidic type i signal peptidase 16.4e-0836.27Show/hide
Query:  GDESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKVILTSLSVCTVSLTSAPHAIVFSREPP
        G + G +   E + EK+      L   S DA+ +F A+ VS+ F+ F+ EP+ IPSLS+YPT +VGD ++A+KV       C        + IV  + PP
Subjt:  GDESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKVILTSLSVCTVSLTSAPHAIVFSREPP

Query:  PL
         L
Subjt:  PL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGGGAAAATCGTAAGAGTCCCATGGTTCTGGGTTTGATGTTGATGCTGGAATGGATGGGCTCTACTTCTGGTTTTTCTTCAATCTCTACAAAGATTTTTGGGGA
TGAAAGTGGAAGCAATCACTTTTATGAGACTGATTTTGAGAAGAGCAACTGGGTTTCAGGCTTGTTAAGTACCTATTCTAAAGATGCAAAGGCTCTCTTCACGGCTCTGA
CTGTTAGTGTGCTCTTTAAGTCATTCTTGGTGGAGCCGAAATCGATTCCTTCTTTATCCATATATCCTACCCTGGAGGTTGGGGATCATGTTTTAGCGAAAAAGGTGATC
CTTACCTCTCTCTCCGTCTGCACCGTCTCTCTCACCTCCGCGCCGCACGCCATTGTCTTCAGCCGTGAGCCGCCGCCGTTGTTCGCAGATCGCCGCCGCCGCTGCCGTCT
TCATCTAGTGGGTGCCCGTGGCGTTGGAGGCCGAGTTGTCGAATCGGAGCGAAACTTGGAAGTTGGACAGCAAGTAGTTTACCCACGACGTTTGAAGGCCGAATTGCTGA
ATTGGAGCGAAGTTGGAAATTGGACAGCAAGCAGTAGCTTCATTTGGGTGAACGAGTATTTCGCATCACGTGGTTGGTGTTGTATCGAGTCGTTGGAGGATTTTCGATCA
AGCGTAGTATCTCAAATCATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGAGGAAGAGGACGTGGCAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCAGTAGA
GCAGGAAGGAAATCTACCAGAAAACCCACAAGTGGAACAGCCGGGGCCTGCGGTAGGACCTGTCCCGGTGGATATTCAGGCAATACCTCTCTCTCCGTCTGCACCGTCTC
TCTCACCTCCGCGCTGCACGCCATTGTCTTCAGCCGTGAGCCGCCGCCGTTGTTCGCAGATCGCCGCCGCCGCTGCCGTCTTCATCTATTTTCGATTTCAAGGTGCCCGT
GGCGTTGGAGGCCGAGTTGTCGAATCGGAGCGAAACTTGGAAGTTGGACAGCAAGTAGTACGAGTATTTCGCATCACGTGGTTGGTGTTGTATCGAGTCGTTGGAGGATT
TTCGATCAAGCGTAGTATCTCAAGT
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGGGAAAATCGTAAGAGTCCCATGGTTCTGGGTTTGATGTTGATGCTGGAATGGATGGGCTCTACTTCTGGTTTTTCTTCAATCTCTACAAAGATTTTTGGGGA
TGAAAGTGGAAGCAATCACTTTTATGAGACTGATTTTGAGAAGAGCAACTGGGTTTCAGGCTTGTTAAGTACCTATTCTAAAGATGCAAAGGCTCTCTTCACGGCTCTGA
CTGTTAGTGTGCTCTTTAAGTCATTCTTGGTGGAGCCGAAATCGATTCCTTCTTTATCCATATATCCTACCCTGGAGGTTGGGGATCATGTTTTAGCGAAAAAGGTGATC
CTTACCTCTCTCTCCGTCTGCACCGTCTCTCTCACCTCCGCGCCGCACGCCATTGTCTTCAGCCGTGAGCCGCCGCCGTTGTTCGCAGATCGCCGCCGCCGCTGCCGTCT
TCATCTAGTGGGTGCCCGTGGCGTTGGAGGCCGAGTTGTCGAATCGGAGCGAAACTTGGAAGTTGGACAGCAAGTAGTTTACCCACGACGTTTGAAGGCCGAATTGCTGA
ATTGGAGCGAAGTTGGAAATTGGACAGCAAGCAGTAGCTTCATTTGGGTGAACGAGTATTTCGCATCACGTGGTTGGTGTTGTATCGAGTCGTTGGAGGATTTTCGATCA
AGCGTAGTATCTCAAATCATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGAGGAAGAGGACGTGGCAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCAGTAGA
GCAGGAAGGAAATCTACCAGAAAACCCACAAGTGGAACAGCCGGGGCCTGCGGTAGGACCTGTCCCGGTGGATATTCAGGCAATACCTCTCTCTCCGTCTGCACCGTCTC
TCTCACCTCCGCGCTGCACGCCATTGTCTTCAGCCGTGAGCCGCCGCCGTTGTTCGCAGATCGCCGCCGCCGCTGCCGTCTTCATCTATTTTCGATTTCAAGGTGCCCGT
GGCGTTGGAGGCCGAGTTGTCGAATCGGAGCGAAACTTGGAAGTTGGACAGCAAGTAGTACGAGTATTTCGCATCACGTGGTTGGTGTTGTATCGAGTCGTTGGAGGATT
TTCGATCAAGCGTAGTATCTCAAGT
Protein sequenceShow/hide protein sequence
MVGENRKSPMVLGLMLMLEWMGSTSGFSSISTKIFGDESGSNHFYETDFEKSNWVSGLLSTYSKDAKALFTALTVSVLFKSFLVEPKSIPSLSIYPTLEVGDHVLAKKVI
LTSLSVCTVSLTSAPHAIVFSREPPPLFADRRRRCRLHLVGARGVGGRVVESERNLEVGQQVVYPRRLKAELLNWSEVGNWTASSSFIWVNEYFASRGWCCIESLEDFRS
SVVSQIMPPRAQGRGRGRGRGRGRGRTAPEQVVPPVEQEGNLPENPQVEQPGPAVGPVPVDIQAIPLSPSAPSLSPPRCTPLSSAVSRRRCSQIAAAAAVFIYFRFQGAR
GVGGRVVESERNLEVGQQVVRVFRITWLVLYRVVGGFSIKRSISS