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Spg018784 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018784
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationscaffold3:9406643..9406985
RNA-Seq ExpressionSpg018784
SyntenySpg018784
Gene Ontology termsGO:0006073 - cellular glucan metabolic process (biological process)
GO:0005618 - cell wall (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR010713 - Xyloglucan endo-transglycosylase, C-terminal
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI17801.3 unnamed protein product, partial [Vitis vinifera]4.6e-2072.73Show/hide
Query:  MRLQSSLWNADDWAIRGGL-------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNAT
        MR+ SSLWNADDWA RGGL       ELD  SQ ++ WVQK YMIYNYCTDTKRFPQGLPPEC AT
Subjt:  MRLQSSLWNADDWAIRGGL-------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNAT

CBI17805.3 unnamed protein product, partial [Vitis vinifera]6.7e-1971.21Show/hide
Query:  MRLQSSLWNADDWAIRGG-------LELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNAT
        MR+ SSLWNADDWA RGG       LELD  SQ ++ WVQK YMIYNYCTDTKRFPQGLP EC AT
Subjt:  MRLQSSLWNADDWAIRGG-------LELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNAT

CBI17810.3 unnamed protein product, partial [Vitis vinifera]2.1e-2075.76Show/hide
Query:  MRLQSSLWNADDWAIRGGL-------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNAT
        MR+ SSLWNADDWA RGGL       ELD  SQ KL WVQK YMIYNYCTDTKRFPQGLPPEC AT
Subjt:  MRLQSSLWNADDWAIRGGL-------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNAT

KAG7023396.1 Xyloglucan endotransglucosylase/hydrolase protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1850.47Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP
        MRLQSSLWNADDWA RGGL                                               ELD  SQGK+NWVQK YMIYNYCTD KRFPQGLP
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP

Query:  PECNATA
        PECNATA
Subjt:  PECNATA

XP_022922053.1 probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucurbita moschata]1.1e-1850.47Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP
        MRLQSSLWNADDWA RGGL                                               ELD  SQGK+NWVQK YMIYNYCTD KRFPQGLP
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP

Query:  PECNATA
        PECNATA
Subjt:  PECNATA

TrEMBL top hitse value%identityAlignment
A0A1S3BW47 Xyloglucan endotransglucosylase/hydrolase6.1e-1849.53Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP
        MRLQSSLWNADDWA RGGL                                               ELD  SQGKL WVQK YMIYNYCTD  RFPQGLP
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP

Query:  PECNATA
        PECNATA
Subjt:  PECNATA

A0A5D3CNM5 Xyloglucan endotransglucosylase/hydrolase6.1e-1849.53Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP
        MRLQSSLWNADDWA RGGL                                               ELD  SQGKL WVQK YMIYNYCTD  RFPQGLP
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP

Query:  PECNATA
        PECNATA
Subjt:  PECNATA

A0A6J1C310 Xyloglucan endotransglucosylase/hydrolase1.2e-1850.47Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP
        MRLQSSLWNADDWA RGGL                                               ELD  SQGKLNWVQK YMIYNYC D KRFPQGLP
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP

Query:  PECNATA
        PECNATA
Subjt:  PECNATA

A0A6J1E5H9 Xyloglucan endotransglucosylase/hydrolase5.5e-1950.47Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP
        MRLQSSLWNADDWA RGGL                                               ELD  SQGK+NWVQK YMIYNYCTD KRFPQGLP
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP

Query:  PECNATA
        PECNATA
Subjt:  PECNATA

A0A6J1JMA1 Xyloglucan endotransglucosylase/hydrolase5.5e-1950.47Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP
        MRLQSSLWNADDWA RGGL                                               ELD  SQGK+NWVQK YMIYNYCTD KRFPQGLP
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP

Query:  PECNATA
        PECNATA
Subjt:  PECNATA

SwissProt top hitse value%identityAlignment
P24806 Xyloglucan endotransglucosylase/hydrolase protein 248.5e-1745.56Show/hide
Query:  MRLQSSLWNADDWAIRGGL------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNATA
        MR+ +SLWNADDWA RGGL                              E+D  SQ +L WVQK YMIYNYCTD +RFPQG P EC  ++
Subjt:  MRLQSSLWNADDWAIRGGL------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNATA

Q38857 Xyloglucan endotransglucosylase/hydrolase protein 223.6e-1540.95Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP
        MR+ SSLWNADDWA RGGL                                               ELD  +Q ++ WVQ+ YMIYNYCTD KRFPQGLP
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP

Query:  PECNA
         EC A
Subjt:  PECNA

Q38907 Probable xyloglucan endotransglucosylase/hydrolase protein 255.1e-1442.27Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPEC
        MRL SSLWNAD WA RGGL                                          LD  ++ K+  VQ+KYMIYNYCTDTKRFPQG P EC
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPEC

Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 238.7e-1439.42Show/hide
Query:  MRLQSSLWNADDWAIRGGL----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPP
        MR+ SSLWNA++WA RGGL                                              ELD   Q ++ WVQ  YMIYNYCTD KRFPQGLP 
Subjt:  MRLQSSLWNADDWAIRGGL----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPP

Query:  ECNA
        EC A
Subjt:  ECNA

Q9FI31 Xyloglucan endotransglucosylase/hydrolase protein 202.3e-1439.18Show/hide
Query:  MRLQSSLWNADDWAIRGGLE----------------------------------------LDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECN
        MRL +SLW A+ WA RGGLE                                        LDF  + ++ W Q+KYM+YNYCTD KRFPQG PPEC+
Subjt:  MRLQSSLWNADDWAIRGGLE----------------------------------------LDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECN

Arabidopsis top hitse value%identityAlignment
AT4G25810.1 xyloglucan endotransglycosylase 66.2e-1539.42Show/hide
Query:  MRLQSSLWNADDWAIRGGL----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPP
        MR+ SSLWNA++WA RGGL                                              ELD   Q ++ WVQ  YMIYNYCTD KRFPQGLP 
Subjt:  MRLQSSLWNADDWAIRGGL----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPP

Query:  ECNA
        EC A
Subjt:  ECNA

AT4G30270.1 xyloglucan endotransglucosylase/hydrolase 246.0e-1845.56Show/hide
Query:  MRLQSSLWNADDWAIRGGL------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNATA
        MR+ +SLWNADDWA RGGL                              E+D  SQ +L WVQK YMIYNYCTD +RFPQG P EC  ++
Subjt:  MRLQSSLWNADDWAIRGGL------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNATA

AT5G48070.1 xyloglucan endotransglucosylase/hydrolase 201.6e-1539.18Show/hide
Query:  MRLQSSLWNADDWAIRGGLE----------------------------------------LDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECN
        MRL +SLW A+ WA RGGLE                                        LDF  + ++ W Q+KYM+YNYCTD KRFPQG PPEC+
Subjt:  MRLQSSLWNADDWAIRGGLE----------------------------------------LDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECN

AT5G57550.1 xyloglucan endotransglucosylase/hydrolase 253.6e-1542.27Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPEC
        MRL SSLWNAD WA RGGL                                          LD  ++ K+  VQ+KYMIYNYCTDTKRFPQG P EC
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPEC

AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein2.5e-1640.95Show/hide
Query:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP
        MR+ SSLWNADDWA RGGL                                               ELD  +Q ++ WVQ+ YMIYNYCTD KRFPQGLP
Subjt:  MRLQSSLWNADDWAIRGGL-----------------------------------------------ELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLP

Query:  PECNA
         EC A
Subjt:  PECNA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTTCAATCCAGTCTGTGGAACGCCGATGACTGGGCAATCAGAGGTGGGCTAGAGCTGGATTTCGTCAGCCAAGGAAAATTGAACTGGGTCCAAAAGAAATACAT
GATTTACAACTATTGCACCGATACAAAGCGATTTCCTCAGGGTCTGCCTCCCGAATGCAATGCCACTGCCTATGTTTTGATCTTGATC
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTTCAATCCAGTCTGTGGAACGCCGATGACTGGGCAATCAGAGGTGGGCTAGAGCTGGATTTCGTCAGCCAAGGAAAATTGAACTGGGTCCAAAAGAAATACAT
GATTTACAACTATTGCACCGATACAAAGCGATTTCCTCAGGGTCTGCCTCCCGAATGCAATGCCACTGCCTATGTTTTGATCTTGATC
Protein sequenceShow/hide protein sequence
MRLQSSLWNADDWAIRGGLELDFVSQGKLNWVQKKYMIYNYCTDTKRFPQGLPPECNATAYVLILI