; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018785 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018785
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold3:20436178..20437804
RNA-Seq ExpressionSpg018785
SyntenySpg018785
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041121.1 hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa]4.5e-2261.9Show/hide
Query:  DSGQIG-WESHFHFFRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYI
        +SG+ G W+       PRGNR SLQTGELD TISIDYMTEILS RLYGTVCT                  VEIELPVPD LPTSAESS ++SSTW+ELY 
Subjt:  DSGQIG-WESHFHFFRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYI

Query:  ESVHI
        ESVH+
Subjt:  ESVHI

KAA0066850.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.6e-1964.04Show/hide
Query:  PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI
        PR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP+S ES  ++SSTW+ELY E VH+
Subjt:  PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.4e-2064.84Show/hide
Query:  FRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI
        + PR NR SLQTGELDKT+SIDYMTEILS RL GTVCTQ                 VEIELPVPDTLPTSAE   ++SSTW+ELY+ESVH+
Subjt:  FRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI

TYK21916.1 hypothetical protein E5676_scaffold494G00570 [Cucumis melo var. makuwa]2.1e-1653.7Show/hide
Query:  DSGQIG-WESHFHFFRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYI
        +SG+ G W+       PRGNRSSLQT ELD TISIDYMTEILS RLYGTVCT                  VEIELPVPD LPTSAESS ++SS +    +
Subjt:  DSGQIG-WESHFHFFRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYI

Query:  ESVHIVHV
          +++V+V
Subjt:  ESVHIVHV

TYK27997.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.6e-1964.04Show/hide
Query:  PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI
        PR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP+S ES  ++SSTW+ELY E VH+
Subjt:  PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI

TrEMBL top hitse value%identityAlignment
A0A5A7THH5 Uncharacterized protein2.2e-2261.9Show/hide
Query:  DSGQIG-WESHFHFFRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYI
        +SG+ G W+       PRGNR SLQTGELD TISIDYMTEILS RLYGTVCT                  VEIELPVPD LPTSAESS ++SSTW+ELY 
Subjt:  DSGQIG-WESHFHFFRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYI

Query:  ESVHI
        ESVH+
Subjt:  ESVHI

A0A5A7VI26 Putative DNA/RNA polymerases superfamily protein7.7e-2064.04Show/hide
Query:  PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI
        PR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP+S ES  ++SSTW+ELY E VH+
Subjt:  PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI

A0A5D3CCC7 DNA/RNA polymerases superfamily protein1.2e-2064.84Show/hide
Query:  FRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI
        + PR NR SLQTGELDKT+SIDYMTEILS RL GTVCTQ                 VEIELPVPDTLPTSAE   ++SSTW+ELY+ESVH+
Subjt:  FRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI

A0A5D3DE96 Uncharacterized protein1.0e-1653.7Show/hide
Query:  DSGQIG-WESHFHFFRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYI
        +SG+ G W+       PRGNRSSLQT ELD TISIDYMTEILS RLYGTVCT                  VEIELPVPD LPTSAESS ++SS +    +
Subjt:  DSGQIG-WESHFHFFRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYI

Query:  ESVHIVHV
          +++V+V
Subjt:  ESVHIVHV

A0A5D3DW05 Putative DNA/RNA polymerases superfamily protein7.7e-2064.04Show/hide
Query:  PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI
        PR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP+S ES  ++SSTW+ELY E VH+
Subjt:  PRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTAATTTCAGGAGGAGGATAAAGGGTAGCAGAGAACCTCGAATCTGTGT
TGTCTGTGTTCGGGGCGATTCCGGGCAAATCGGTTGGGAATCTCATTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAA
TTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAA
AGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTACATGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTAATTTCAGGAGGAGGATAAAGGGTAGCAGAGAACCTCGAATCTGTGT
TGTCTGTGTTCGGGGCGATTCCGGGCAAATCGGTTGGGAATCTCATTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAA
TTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAA
AGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTACATGTTTTGTAA
Protein sequenceShow/hide protein sequence
MVFGMENRAQDFRAKQEDLWFNFRRRIKGSREPRICVVCVRGDSGQIGWESHFHFFRPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQVEIELPVPDTLPTSAE
SSRTSSSTWVELYIESVHIVHVL