; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018822 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018822
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationscaffold3:17846303..17848601
RNA-Seq ExpressionSpg018822
SyntenySpg018822
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049805.1 polygalacturonase-like [Cucumis melo var. makuwa]1.0e-10061.49Show/hide
Query:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ
        N ITIR+DG L+APSDF++TSNSEN ILFHNVNGVTVLGGILDGQGT+LW CKNS  TCP GTTSLEFT+SQNI+++GLT+++S+++HIVVN+C NVKMQ
Subjt:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ

Query:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV---------
        G+ V A+ NSPNTDGIHVG SS+VTIL +NI TGDDCISIGPG+SNLWI+N+ACGPGHGIS+G+   D KE GVQN+TV+S +F++TQNGV         
Subjt:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV---------

Query:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV
                                               G+ +SDV Y DI GTSAT V +KFDCSPK PC GI L+DVKLSYKNQVAKASC++A G  V
Subjt:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV

Query:  GFVQPSTCF
        G VQP  CF
Subjt:  GFVQPSTCF

XP_008448091.1 PREDICTED: polygalacturonase-like [Cucumis melo]1.0e-10061.49Show/hide
Query:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ
        N ITIR+DG L+APSDF++TSNSEN ILFHNVNGVTVLGGILDGQGT+LW CKNS  TCP GTTSLEFT+SQNI+++GLT+++S+++HIVVN+C NVKMQ
Subjt:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ

Query:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV---------
        G+ V A+ NSPNTDGIHVG SS+VTIL +NI TGDDCISIGPG+SNLWI+N+ACGPGHGIS+G+   D KE GVQN+TV+S +F++TQNGV         
Subjt:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV---------

Query:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV
                                               G+ +SDV Y DI GTSAT V +KFDCSPK PC GI L+DVKLSYKNQVAKASC++A G  V
Subjt:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV

Query:  GFVQPSTCF
        G VQP  CF
Subjt:  GFVQPSTCF

XP_022971873.1 polygalacturonase-like [Cucurbita maxima]1.3e-9560.93Show/hide
Query:  TNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKM
        ++AI I +DGTL+APSDF+V +NS N I+FH VNGV++ GG LDGQG  LW CK S KTCPLG TSLEFTDS+NI+ISGLTS++S++FHIVVN+CHNVKM
Subjt:  TNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKM

Query:  QGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV--------
        +G+ V AS NSPNTDGIHVGLSS+VTIL S+I TGDDCISIGPGTSNLWI+NVACGPGHGI   SLG  LKEDGVQN+TV+S RF NTQNGV        
Subjt:  QGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV--------

Query:  ---------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTA
                                                GIK+SDVTY+DI GT+AT   + FDCSPK PC GI L+DVKLSYKN  AKA CTH  G  
Subjt:  ---------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTA

Query:  VG
         G
Subjt:  VG

XP_031745066.1 polygalacturonase [Cucumis sativus]5.3e-10262.46Show/hide
Query:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ
        N ITIR+DGTL+APSDF +TSNSEN ILFHNVNGVTV+GGI+DGQGT+LW CKNS  TCP GTTSLEFT+SQNI+++GLTS++S++FHIVVN+C NVKMQ
Subjt:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ

Query:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV---------
        G+ V+A++NSPNTDGIHVG SS+VTIL SNI TGDDCISIGPG+SNLWI+NV CGPGHGI   SLG +LKE GVQN+TV+S +F++TQNGV         
Subjt:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV---------

Query:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV
                                               G+ +SDV Y++IHGTSAT V +KFDCSPK PC GI L+DVKLSYKNQVAKASC++A G  V
Subjt:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV

Query:  GFVQPSTCF
        G VQP  CF
Subjt:  GFVQPSTCF

XP_038888717.1 polygalacturonase-like [Benincasa hispida]7.7e-10162.14Show/hide
Query:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ
        NAITIR+DGTL+A SDF++   SE+ I+FHNVNGV VLGG++DGQG+ LW CKNS K CP G TSL+FTDSQNI++SGL S++S++FHIVVN+CHNVKM 
Subjt:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ

Query:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV---------
        G+ V AS+NSPNTDGIH+G SSYVTI  S IGTGDDCISIGPGTSNLWI+N+ACGPGHGI   SLG +LKE+GV+N+TV+S  FINTQNGV         
Subjt:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV---------

Query:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV
                                               GIKISDVTYEDIHGTSAT VG+KFDCSPK PC GI L+DVKLSYKNQVAKASC++A G  V
Subjt:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV

Query:  GFVQPSTCF
        G V    CF
Subjt:  GFVQPSTCF

TrEMBL top hitse value%identityAlignment
A0A0A0K6Z5 Uncharacterized protein2.6e-10262.46Show/hide
Query:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ
        N ITIR+DGTL+APSDF +TSNSEN ILFHNVNGVTV+GGI+DGQGT+LW CKNS  TCP GTTSLEFT+SQNI+++GLTS++S++FHIVVN+C NVKMQ
Subjt:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ

Query:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV---------
        G+ V+A++NSPNTDGIHVG SS+VTIL SNI TGDDCISIGPG+SNLWI+NV CGPGHGI   SLG +LKE GVQN+TV+S +F++TQNGV         
Subjt:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV---------

Query:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV
                                               G+ +SDV Y++IHGTSAT V +KFDCSPK PC GI L+DVKLSYKNQVAKASC++A G  V
Subjt:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV

Query:  GFVQPSTCF
        G VQP  CF
Subjt:  GFVQPSTCF

A0A1S3BJI1 polygalacturonase-like4.8e-10161.49Show/hide
Query:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ
        N ITIR+DG L+APSDF++TSNSEN ILFHNVNGVTVLGGILDGQGT+LW CKNS  TCP GTTSLEFT+SQNI+++GLT+++S+++HIVVN+C NVKMQ
Subjt:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ

Query:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV---------
        G+ V A+ NSPNTDGIHVG SS+VTIL +NI TGDDCISIGPG+SNLWI+N+ACGPGHGIS+G+   D KE GVQN+TV+S +F++TQNGV         
Subjt:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV---------

Query:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV
                                               G+ +SDV Y DI GTSAT V +KFDCSPK PC GI L+DVKLSYKNQVAKASC++A G  V
Subjt:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV

Query:  GFVQPSTCF
        G VQP  CF
Subjt:  GFVQPSTCF

A0A5A7U863 Polygalacturonase-like4.8e-10161.49Show/hide
Query:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ
        N ITIR+DG L+APSDF++TSNSEN ILFHNVNGVTVLGGILDGQGT+LW CKNS  TCP GTTSLEFT+SQNI+++GLT+++S+++HIVVN+C NVKMQ
Subjt:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ

Query:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV---------
        G+ V A+ NSPNTDGIHVG SS+VTIL +NI TGDDCISIGPG+SNLWI+N+ACGPGHGIS+G+   D KE GVQN+TV+S +F++TQNGV         
Subjt:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV---------

Query:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV
                                               G+ +SDV Y DI GTSAT V +KFDCSPK PC GI L+DVKLSYKNQVAKASC++A G  V
Subjt:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV

Query:  GFVQPSTCF
        G VQP  CF
Subjt:  GFVQPSTCF

A0A6J1GNK7 polygalacturonase-like8.0e-9661.13Show/hide
Query:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ
        +AI I +DGTL+APSDF+V +NS N I+FH VNGV++ GG LDGQG  LW CK S KTCP G TSLEFTDS+NIMISGLTS++S++FHIVVN+CHNVKM+
Subjt:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQ

Query:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV---------
        G+ V AS NSPNTDGIHVGLSS+VTIL S+I TGDDCISIGPGTSNLWI+NVACGPGHGI   SLG  LKEDGVQN+TV+S RF+NTQNGV         
Subjt:  GINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV---------

Query:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV
                                               GIK+SDVTY+DI GT+AT   + FDCSPK PC GI L+DVKLSYKN  AKA C+H  GT  
Subjt:  --------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAV

Query:  G
        G
Subjt:  G

A0A6J1I881 polygalacturonase-like6.1e-9660.93Show/hide
Query:  TNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKM
        ++AI I +DGTL+APSDF+V +NS N I+FH VNGV++ GG LDGQG  LW CK S KTCPLG TSLEFTDS+NI+ISGLTS++S++FHIVVN+CHNVKM
Subjt:  TNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKM

Query:  QGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV--------
        +G+ V AS NSPNTDGIHVGLSS+VTIL S+I TGDDCISIGPGTSNLWI+NVACGPGHGI   SLG  LKEDGVQN+TV+S RF NTQNGV        
Subjt:  QGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV--------

Query:  ---------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTA
                                                GIK+SDVTY+DI GT+AT   + FDCSPK PC GI L+DVKLSYKN  AKA CTH  G  
Subjt:  ---------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTA

Query:  VG
         G
Subjt:  VG

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438601.2e-6445.1Show/hide
Query:  ITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNS-DKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQG
        I+IR+ G+++AP DF + ++S++ I F +V  V++ GGILD QGT LW CKN+    CP G  SL F+ S NI ISGLTS++S+ FHIV++  +NV + G
Subjt:  ITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNS-DKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQG

Query:  INVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV----------
        + V A  NSPNTDGIHV  S  V I  S IGTGDDCISIGPG++N++IQ + CGPGHGI   SLG   +E GV N+TV +  F+ T NGV          
Subjt:  INVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV----------

Query:  ------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVGF
                                             G+K+S+V YEDIHGTS TEV V  DCS + PCTGI + DV L   ++ A+ASC +A G+A   
Subjt:  ------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVGF

Query:  VQPSTC
        V  + C
Subjt:  VQPSTC

P26216 Exopolygalacturonase4.9e-4233.65Show/hide
Query:  PITNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLG-GILDGQGTRLWTCKNSDK--TCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKC
        P    +TI++DG LLA +D     +  N I    V+ + + G G LDGQG  +W+  +  K   C +   SL      N  +SG+T ++SK FH+ + +C
Subjt:  PITNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLG-GILDGQGTRLWTCKNSDK--TCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKC

Query:  HNVKMQGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT--------DLKEDGVQNITVRSSRF-----
         ++ ++ + V A  +SPNTDGIH+G SS +TI  + IG GDDCISIGPGTS + I  V CGPGHGIS+G+        D+ +  V++ T++ + F     
Subjt:  HNVKMQGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT--------DLKEDGVQNITVRSSRF-----

Query:  --------------------------------------INTQNGVYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYK--NQVAKAS
                                              + T NG   + + DVT+++I GTS+T   V   C+ K PCTG+++ DV + Y   N    A 
Subjt:  --------------------------------------INTQNGVYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYK--NQVAKAS

Query:  CTHAAGTAVGFVQPSTCF
        CT+A G+  G ++   CF
Subjt:  CTHAAGTAVGFVQPSTCF

P35338 Exopolygalacturonase8.4e-4233.65Show/hide
Query:  PITNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLG-GILDGQGTRLWTCKNSDK--TCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKC
        P    +TI++DG LLA +D        N I    V+ + + G G LDGQG  +W+  +  K   C +   SL      N  +SG+T ++SK FH+ + +C
Subjt:  PITNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLG-GILDGQGTRLWTCKNSDK--TCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKC

Query:  HNVKMQGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT--------DLKEDGVQNITVRSSRF-----
         N+ ++ + V A  +SPNTDGIH+G SS +TI  + IG GDDCISIGPGTS + I  V CGPGHGIS+G+        D+ +  V++ T++ + F     
Subjt:  HNVKMQGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT--------DLKEDGVQNITVRSSRF-----

Query:  --------------------------------------INTQNGVYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYK--NQVAKAS
                                              + T NG   + + DVT+++I GTS+T   +   C+ K PCTG ++ DV + Y   N    A 
Subjt:  --------------------------------------INTQNGVYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYK--NQVAKAS

Query:  CTHAAGTAVGFVQPSTCF
        CT+A G+  G ++   CF
Subjt:  CTHAAGTAVGFVQPSTCF

P35339 Exopolygalacturonase6.4e-4235.42Show/hide
Query:  PITNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLG-GILDGQGTRLWTCKNS---DKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNK
        P    +TI+++G LLA +D     +  N I    V+ + + G G LDGQG  +W+ KNS      C +   SL      N  +SG+T ++SK FH+ + K
Subjt:  PITNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLG-GILDGQGTRLWTCKNS---DKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNK

Query:  CHNVKMQGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLG-----------TDLK---------------
        C ++ ++ +NV A  +SPNTDGIH+G SS VTI  + IG GDDCISIGPGTS + I  V CGPGHGIS+G           TD+                
Subjt:  CHNVKMQGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLG-----------TDLK---------------

Query:  ---EDGVQNITVRSSRFIN----------------------TQNGVYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYK--NQVAKA
           ED    +T     + N                      T NG   + + DVT+++I GTS+T   V   C+ K PCTG+++ DV + Y   N    A
Subjt:  ---EDGVQNITVRSSRFIN----------------------TQNGVYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYK--NQVAKA

Query:  SCTHAAGTAVGFVQPSTCF
         C +A G+A G ++   CF
Subjt:  SCTHAAGTAVGFVQPSTCF

P48979 Polygalacturonase6.3e-9055.99Show/hide
Query:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKN-SDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKM
        NAIT R+ GTL+APSD+ V  N+ N I FH+VNGVT+ GGILDGQGT LW CK    ++CP G T+L F+DS NI++SGL S++S+MFHIV+N   NV+M
Subjt:  NAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKN-SDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKM

Query:  QGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNG---------
        QG+ V  S NSPNTDGIHV +SS VTIL S I TGDDC+SIGPGTSNLWI+ VACGPGHGI   SLG + +E GVQN+TV++  F  TQNG         
Subjt:  QGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNG---------

Query:  --------------------------------------VYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTA
                                              V G++ISDVTYEDIHGTSATEV VKFDCSPK PC  I L+DVKL+YKNQ A++SC+HA GT 
Subjt:  --------------------------------------VYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTA

Query:  VGFVQPSTC
         G VQP++C
Subjt:  VGFVQPSTC

Arabidopsis top hitse value%identityAlignment
AT1G05660.1 Pectin lyase-like superfamily protein4.0e-6340.06Show/hide
Query:  PITNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNV
        P  + IT ++ GT++AP D+    NS   ILF+ VN  +++GG  D +    W+C+ S + CP G  S+ F  +++++ISG+ SM+S++ H+ +N C NV
Subjt:  PITNAITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNV

Query:  KMQGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV------
         ++ + + A  NSPNTDG HV  S+ VT   S + TGDDC++IGPGT NL I  +ACGPGHG+S+G+   +LKEDGV+N+TV SS F  +QNGV      
Subjt:  KMQGINVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV------

Query:  -----------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSY-KNQVAKASCTHAA
                                                  G+KIS VTY++I GTSAT+  +K  CS  SPCTGI+L+D+KL+Y K   A + C +A 
Subjt:  -----------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSY-KNQVAKASCTHAA

Query:  GTAVGFVQPSTC
        G ++G +QP++C
Subjt:  GTAVGFVQPSTC

AT1G65570.1 Pectin lyase-like superfamily protein4.8e-6941.18Show/hide
Query:  ITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQGI
        IT+R+DGTL+ P D+ +    EN   F  V+ VTVLGG  D +G+ LW+CK +   CP G T+L F DS N+ I G+ S++S++FHI +N+C N+K++ +
Subjt:  ITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQGI

Query:  NVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV-----------
         + A + SPNTDGIH+ LS+ + +  ++I TGDDCISIGPGT NL +  + CGPGHGIS+G+    ++E GV+N+TV+++ F+ T NG+           
Subjt:  NVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGT---DLKEDGVQNITVRSSRFINTQNGV-----------

Query:  ------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVGF
                                             GIKI+DV Y  I GTSATE+ +K DCS K PCTGI ++ + L+   + AK SCT+ +G  +G 
Subjt:  ------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVGF

Query:  VQPSTC
        V PS C
Subjt:  VQPSTC

AT2G43860.1 Pectin lyase-like superfamily protein8.5e-6645.1Show/hide
Query:  ITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNS-DKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQG
        I+IR+ G+++AP DF + ++S++ I F +V  V++ GGILD QGT LW CKN+    CP G  SL F+ S NI ISGLTS++S+ FHIV++  +NV + G
Subjt:  ITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNS-DKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQG

Query:  INVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV----------
        + V A  NSPNTDGIHV  S  V I  S IGTGDDCISIGPG++N++IQ + CGPGHGI   SLG   +E GV N+TV +  F+ T NGV          
Subjt:  INVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNGV----------

Query:  ------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVGF
                                             G+K+S+V YEDIHGTS TEV V  DCS + PCTGI + DV L   ++ A+ASC +A G+A   
Subjt:  ------------------------------------YGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVGF

Query:  VQPSTC
        V  + C
Subjt:  VQPSTC

AT2G43870.1 Pectin lyase-like superfamily protein2.4e-8450.83Show/hide
Query:  ITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQGI
        +T R+DGTL+AP+D+ V  N +  I F +++G+TV GG+LD +G  LW CK S K CP G T++ F  S N+++SGLTS++S+MFH+V+N C+NVK+QG+
Subjt:  ITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQGI

Query:  NVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNG------------
         V A+ NSPNTDGIHV  SS V+I  + I TGDDC+SIGPGT+ LWI+NVACGPGHGI   SLG D  E GVQN+TV++  F  T NG            
Subjt:  NVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGI---SLGTDLKEDGVQNITVRSSRFINTQNG------------

Query:  ----------------------------------VYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVGFV
                                          V GIKISDV + DIHGTSATEVGVK DCS K PCTGI L+DVKL+Y+N+ A ++CTHA G   GF 
Subjt:  ----------------------------------VYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVGFV

Query:  QPS
        QP+
Subjt:  QPS

AT3G59850.1 Pectin lyase-like superfamily protein1.5e-8350.16Show/hide
Query:  AITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQG
        ++T R+ GTL+APSD+ V       ILF +++G++V GG+LD QG  LW+CK S K CP G TS+ F  S+N++ISGLTS++S+MFH+ +N C NVK+ G
Subjt:  AITIRMDGTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQG

Query:  INVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGTDLKED---GVQNITVRSSRFINTQNG-----------
        + V A  NSPNTDGIHV  SS V+IL S I TGDDC+SIGPGT+ LWI+NVACGPGHGIS+G+  KE    GVQNITV+++ F  T+NG           
Subjt:  INVWASNNSPNTDGIHVGLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGTDLKED---GVQNITVRSSRFINTQNG-----------

Query:  ------------------------------------VYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVG
                                            V GIKISDV + DIHGTSATEVGVK DCS K PCTGI ++DVKL+Y+N+ A   C+HA G+  G
Subjt:  ------------------------------------VYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKDVKLSYKNQVAKASCTHAAGTAVG

Query:  FVQPSTC
        F +P++C
Subjt:  FVQPSTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAGTCAGGTTTTAGGCATTCGGAGGCGATTTGGGCTGAACCCAGTGGAACCGAGGCAGCCGGGGGCACTAGGGACCGAACGGAGGCGGAAGAACTCGGCCCGTG
CAAGCGAACCGAGTGGTCGGCCTCGGGCCGAGGCCGAGCAGGGGGTCGGGCCAAATGCCCGATCCCTTCGGCTTTGGCCCGACCCTTTGGCCTGCTCTTCCTCCGGATCC
CGTTTCCTGGCTGTCTTCTTGGGCTGGTATCGCGCTGTCCTCGTCAGCTCCTTGCATATCGGAGTGGTCCAAAATTACCTATAACAAATGCCATCACCATACGCATGGAT
GGCACTCTCCTGGCTCCCTCAGACTTCTATGTTACTAGCAACTCTGAAAATTGCATCCTATTTCACAATGTTAATGGTGTTACTGTCTTAGGTGGCATTCTTGATGGTCA
AGGAACTAGGTTGTGGACTTGCAAAAACTCTGACAAGACTTGTCCTCTTGGAACCACGTCACTGGAATTTACCGATTCACAAAACATAATGATTAGTGGATTAACATCAA
TGAGTAGCAAGATGTTTCATATAGTTGTGAATAAGTGCCACAATGTAAAAATGCAAGGGATAAATGTCTGGGCATCCAATAATAGTCCAAACACCGATGGCATTCACGTA
GGTCTATCATCTTATGTCACCATCCTCAAGTCCAATATTGGCACCGGCGATGATTGCATTTCAATAGGTCCTGGCACTTCCAACTTGTGGATTCAGAATGTTGCTTGTGG
ACCTGGCCATGGAATAAGTTTAGGGACAGATTTGAAGGAGGATGGAGTTCAGAATATTACGGTGAGATCTTCTAGATTTATCAACACTCAAAATGGGGTTTATGGAATTA
AAATTAGCGACGTTACGTATGAAGACATTCATGGAACATCGGCCACAGAGGTGGGCGTGAAATTCGATTGTAGCCCAAAGTCTCCATGCACGGGAATAAGCCTGAAGGAC
GTTAAGCTGAGCTACAAGAATCAAGTAGCTAAAGCTTCATGTACTCATGCTGCCGGAACTGCTGTTGGCTTTGTTCAACCAAGCACTTGTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTAAGTCAGGTTTTAGGCATTCGGAGGCGATTTGGGCTGAACCCAGTGGAACCGAGGCAGCCGGGGGCACTAGGGACCGAACGGAGGCGGAAGAACTCGGCCCGTG
CAAGCGAACCGAGTGGTCGGCCTCGGGCCGAGGCCGAGCAGGGGGTCGGGCCAAATGCCCGATCCCTTCGGCTTTGGCCCGACCCTTTGGCCTGCTCTTCCTCCGGATCC
CGTTTCCTGGCTGTCTTCTTGGGCTGGTATCGCGCTGTCCTCGTCAGCTCCTTGCATATCGGAGTGGTCCAAAATTACCTATAACAAATGCCATCACCATACGCATGGAT
GGCACTCTCCTGGCTCCCTCAGACTTCTATGTTACTAGCAACTCTGAAAATTGCATCCTATTTCACAATGTTAATGGTGTTACTGTCTTAGGTGGCATTCTTGATGGTCA
AGGAACTAGGTTGTGGACTTGCAAAAACTCTGACAAGACTTGTCCTCTTGGAACCACGTCACTGGAATTTACCGATTCACAAAACATAATGATTAGTGGATTAACATCAA
TGAGTAGCAAGATGTTTCATATAGTTGTGAATAAGTGCCACAATGTAAAAATGCAAGGGATAAATGTCTGGGCATCCAATAATAGTCCAAACACCGATGGCATTCACGTA
GGTCTATCATCTTATGTCACCATCCTCAAGTCCAATATTGGCACCGGCGATGATTGCATTTCAATAGGTCCTGGCACTTCCAACTTGTGGATTCAGAATGTTGCTTGTGG
ACCTGGCCATGGAATAAGTTTAGGGACAGATTTGAAGGAGGATGGAGTTCAGAATATTACGGTGAGATCTTCTAGATTTATCAACACTCAAAATGGGGTTTATGGAATTA
AAATTAGCGACGTTACGTATGAAGACATTCATGGAACATCGGCCACAGAGGTGGGCGTGAAATTCGATTGTAGCCCAAAGTCTCCATGCACGGGAATAAGCCTGAAGGAC
GTTAAGCTGAGCTACAAGAATCAAGTAGCTAAAGCTTCATGTACTCATGCTGCCGGAACTGCTGTTGGCTTTGTTCAACCAAGCACTTGTTTTTAG
Protein sequenceShow/hide protein sequence
MLKSGFRHSEAIWAEPSGTEAAGGTRDRTEAEELGPCKRTEWSASGRGRAGGRAKCPIPSALARPFGLLFLRIPFPGCLLGLVSRCPRQLLAYRSGPKLPITNAITIRMD
GTLLAPSDFYVTSNSENCILFHNVNGVTVLGGILDGQGTRLWTCKNSDKTCPLGTTSLEFTDSQNIMISGLTSMSSKMFHIVVNKCHNVKMQGINVWASNNSPNTDGIHV
GLSSYVTILKSNIGTGDDCISIGPGTSNLWIQNVACGPGHGISLGTDLKEDGVQNITVRSSRFINTQNGVYGIKISDVTYEDIHGTSATEVGVKFDCSPKSPCTGISLKD
VKLSYKNQVAKASCTHAAGTAVGFVQPSTCF