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Spg018847 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018847
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleolar protein 58-like
Genome locationscaffold3:21620503..21622623
RNA-Seq ExpressionSpg018847
SyntenySpg018847
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.0e-1636.25Show/hide
Query:  EFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKP
        +FC HP   +VPLVREFYA L + +   V V+   V F++  IN ++ ++  +     D     + +Q++  L  VA +G  W+ S     T +  +LK 
Subjt:  EFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKP

Query:  ESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILAC--GRNRAG
         + +W +FL  R MP+TH  T+  DRV+LLY I+ G+ +NI  I  +EI AC   R R G
Subjt:  ESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILAC--GRNRAG

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.8e-2239.38Show/hide
Query:  EEFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLK
        ++FCAHP++ +VPLVREFYA L +   + V VRG  VS+S   IN V+ +  P+    ++ I N +   +   L+ VA  G +W  S     T + S L 
Subjt:  EEFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLK

Query:  PESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS
        P + VW +FLK+ L+PTTH  T+  DR++LL+ ++ G  IN+G +I  EI AC   + G+
Subjt:  PESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.9e-2340Show/hide
Query:  EEFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLK
        ++FCAHP++ +VPLVREFYA L +   + V VRG  VS+S   IN V+ +  P+    ++ I+N + + +   L+ VA  G +W  S     T + S L 
Subjt:  EEFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLK

Query:  PESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS
        P + VW +FLK+RL+PTTH  T+  DR++LL+ ++ G  IN+G +I  EI AC   + G+
Subjt:  PESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.0e-1629.78Show/hide
Query:  REIKVERRTKNKNDSIFAKRSRTRSMVSSPAAPPTVSPAKPKAKSPKVPSPKNPFPEE---------FCAHPQEAVVPLVREFYAYLREESISMVVVRGK
        RE+ +ER  +N + ++  +                +S  K        P  + PF  +         FCAHP++ +VPLVREFY  +       V +RG 
Subjt:  REIKVERRTKNKNDSIFAKRSRTRSMVSSPAAPPTVSPAKPKAKSPKVPSPKNPFPEE---------FCAHPQEAVVPLVREFYAYLREESISMVVVRGK

Query:  MVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKPESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIM
         V  S   IN ++ +  P+    ++ + + +  ++   L+ VA  G +W  S     T + S L P + VW +FLK+RL+PTTH  T+  + V LLY ++
Subjt:  MVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKPESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIM

Query:  KGLEINIGSIIKEEILACGRNRAGS
         G  IN+G +I  EI AC   ++G+
Subjt:  KGLEINIGSIIKEEILACGRNRAGS

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.2e-1737.58Show/hide
Query:  VPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKPESVVWLNFLK
        +PLVREFYA L +   + + VRG  VS+S   IN V+ +  P+    ++ I N +  ++   L+ VA  G +W  S     T + S L P + VW +FLK
Subjt:  VPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKPESVVWLNFLK

Query:  NRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS
        +RL+PTTH   +  DR++LL+ ++ G  IN+G +I  EI AC   + G+
Subjt:  NRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.4e-2239.38Show/hide
Query:  EEFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLK
        ++FCAHP++ +VPLVREFYA L +   + V VRG  VS+S   IN V+ +  P+    ++ I N +   +   L+ VA  G +W  S     T + S L 
Subjt:  EEFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLK

Query:  PESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS
        P + VW +FLK+ L+PTTH  T+  DR++LL+ ++ G  IN+G +I  EI AC   + G+
Subjt:  PESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS

A0A2P5BCG4 Uncharacterized protein (Fragment)9.4e-2440Show/hide
Query:  EEFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLK
        ++FCAHP++ +VPLVREFYA L +   + V VRG  VS+S   IN V+ +  P+    ++ I+N + + +   L+ VA  G +W  S     T + S L 
Subjt:  EEFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLK

Query:  PESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS
        P + VW +FLK+RL+PTTH  T+  DR++LL+ ++ G  IN+G +I  EI AC   + G+
Subjt:  PESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS

A0A2P5DAQ2 Uncharacterized protein5.0e-1729.78Show/hide
Query:  REIKVERRTKNKNDSIFAKRSRTRSMVSSPAAPPTVSPAKPKAKSPKVPSPKNPFPEE---------FCAHPQEAVVPLVREFYAYLREESISMVVVRGK
        RE+ +ER  +N + ++  +                +S  K        P  + PF  +         FCAHP++ +VPLVREFY  +       V +RG 
Subjt:  REIKVERRTKNKNDSIFAKRSRTRSMVSSPAAPPTVSPAKPKAKSPKVPSPKNPFPEE---------FCAHPQEAVVPLVREFYAYLREESISMVVVRGK

Query:  MVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKPESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIM
         V  S   IN ++ +  P+    ++ + + +  ++   L+ VA  G +W  S     T + S L P + VW +FLK+RL+PTTH  T+  + V LLY ++
Subjt:  MVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKPESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIM

Query:  KGLEINIGSIIKEEILACGRNRAGS
         G  IN+G +I  EI AC   ++G+
Subjt:  KGLEINIGSIIKEEILACGRNRAGS

A0A2P5DXM3 Uncharacterized protein5.9e-1837.58Show/hide
Query:  VPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKPESVVWLNFLK
        +PLVREFYA L +   + + VRG  VS+S   IN V+ +  P+    ++ I N +  ++   L+ VA  G +W  S     T + S L P + VW +FLK
Subjt:  VPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKPESVVWLNFLK

Query:  NRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS
        +RL+PTTH   +  DR++LL+ ++ G  IN+G +I  EI AC   + G+
Subjt:  NRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILACGRNRAGS

W9QTD9 Uncharacterized protein5.0e-1736.25Show/hide
Query:  EFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKP
        +FC HP   +VPLVREFYA L + +   V V+   V F++  IN ++ ++  +     D     + +Q++  L  VA +G  W+ S     T +  +LK 
Subjt:  EFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFSSVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKP

Query:  ESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILAC--GRNRAG
         + +W +FL  R MP+TH  T+  DRV+LLY I+ G+ +NI  I  +EI AC   R R G
Subjt:  ESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEILAC--GRNRAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCGGGCGATGGGAGCTCAGAGACGGGCAGCTCTTGAAGAAGAAGCGAATAGGCGAGATGAAGAAGAAGCTGCAAAAGCAGTAGGAAGCTCTCGGCAAATGGAGGC
TTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTCTTCGTCTTGTAGGAACAAACCATTCGTTGCCTATAGTGCAAGGAGGAGGAGTCCCAAGAAAGTTGTGCCCG
AGAAACCACTTGTTATCGAGCCCCTCAAAACCGCAAGAATGCCCCCGGACGTGTTTGAGGACATAATCTGCCAAGCTGTGGCAAAGGCTCTAGTGATTGTCGTAGGCTAT
AGGGTTGAACATGAAGCTTTGAAGGATATTGAGGCTGAAAGAGAACTTGAAAATCGGCACATGAGGAAAAAAGATGAGAAAAGAAGAAAGGAAGCAGAAGACTTCCTTGC
AGCTTTTGAGCCACTCCACAAGGCTCAAAGCCAAGAGGAGGCCACTCAAGCACAGCCAGCTGATGAGGTTTTCGAACCTCTATTCAAAGATGACCCACCAGGAGCTGATA
GCACCTCTTCGGGAGAGAAGAGAGGTGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCAGTGACTCAGAGACAGAATCCGACTCAGAGATCAAGGAATTGGACGAC
GACCAAATTCCTATCTCTGCGGCATTGAGGAGAGAGAGAAGGAGAGAAATCAAAGTTGAAAGGAGGACAAAGAATAAGAATGACTCGATATTTGCCAAGAGGTCGAGGAC
AAGGTCCATGGTCTCCTCTCCAGCAGCTCCTCCAACCGTCTCACCCGCCAAGCCAAAGGCCAAATCACCCAAGGTTCCATCTCCTAAAAATCCATTCCCCGAGGAGTTCT
GTGCTCACCCTCAGGAGGCTGTAGTGCCTTTAGTTCGTGAGTTTTACGCCTACCTGAGGGAGGAAAGCATTAGTATGGTGGTGGTGAGAGGCAAGATGGTCAGCTTCTCT
TCAGTGGACATTAACAAGGTGTACAGAATCAAGGCACCCTTACATCCAAGAGGGAACGATGTCATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCATTACAACTTGT
GGCCAACAAGGGAGTTCAATGGAAAGAATCCCAAACGAAGGTGAAGACTTTAGTGCCAAGCGATCTAAAGCCAGAATCAGTAGTTTGGCTTAACTTTCTGAAAAACCGTT
TGATGCCAACCACCCACGATAGCACCATTTTAGTAGATAGAGTCATGCTCCTCTACTGTATTATGAAGGGGTTGGAGATCAACATTGGGAGCATAATCAAGGAAGAGATT
TTAGCCTGTGGAAGGAATAGAGCAGGGTCTGCACTGTCATCGGAAGCCCTAGCCATTGCCTACCGCCAGCTAGATCAAATCAGGGAAAACGTGAAGACATATTGGGCATA
TGCAAAGGAGAGAGATGAAGCCATTAAAGAGTTTATCCCTCTATCGCCCCAAGTATTGCCCCAGTCTTTCCCGATTTCCCTCGATCGCTGCTGCCTCAAGAAGACAAGGA
TTCTGATGATGAAGAAGATGAAAATGATGATGAAGAAGATGAAGACAAAAAGAGTTTCTCGGACGAGGACTAGGGCAGTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCGGGCGATGGGAGCTCAGAGACGGGCAGCTCTTGAAGAAGAAGCGAATAGGCGAGATGAAGAAGAAGCTGCAAAAGCAGTAGGAAGCTCTCGGCAAATGGAGGC
TTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTCTTCGTCTTGTAGGAACAAACCATTCGTTGCCTATAGTGCAAGGAGGAGGAGTCCCAAGAAAGTTGTGCCCG
AGAAACCACTTGTTATCGAGCCCCTCAAAACCGCAAGAATGCCCCCGGACGTGTTTGAGGACATAATCTGCCAAGCTGTGGCAAAGGCTCTAGTGATTGTCGTAGGCTAT
AGGGTTGAACATGAAGCTTTGAAGGATATTGAGGCTGAAAGAGAACTTGAAAATCGGCACATGAGGAAAAAAGATGAGAAAAGAAGAAAGGAAGCAGAAGACTTCCTTGC
AGCTTTTGAGCCACTCCACAAGGCTCAAAGCCAAGAGGAGGCCACTCAAGCACAGCCAGCTGATGAGGTTTTCGAACCTCTATTCAAAGATGACCCACCAGGAGCTGATA
GCACCTCTTCGGGAGAGAAGAGAGGTGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCAGTGACTCAGAGACAGAATCCGACTCAGAGATCAAGGAATTGGACGAC
GACCAAATTCCTATCTCTGCGGCATTGAGGAGAGAGAGAAGGAGAGAAATCAAAGTTGAAAGGAGGACAAAGAATAAGAATGACTCGATATTTGCCAAGAGGTCGAGGAC
AAGGTCCATGGTCTCCTCTCCAGCAGCTCCTCCAACCGTCTCACCCGCCAAGCCAAAGGCCAAATCACCCAAGGTTCCATCTCCTAAAAATCCATTCCCCGAGGAGTTCT
GTGCTCACCCTCAGGAGGCTGTAGTGCCTTTAGTTCGTGAGTTTTACGCCTACCTGAGGGAGGAAAGCATTAGTATGGTGGTGGTGAGAGGCAAGATGGTCAGCTTCTCT
TCAGTGGACATTAACAAGGTGTACAGAATCAAGGCACCCTTACATCCAAGAGGGAACGATGTCATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCATTACAACTTGT
GGCCAACAAGGGAGTTCAATGGAAAGAATCCCAAACGAAGGTGAAGACTTTAGTGCCAAGCGATCTAAAGCCAGAATCAGTAGTTTGGCTTAACTTTCTGAAAAACCGTT
TGATGCCAACCACCCACGATAGCACCATTTTAGTAGATAGAGTCATGCTCCTCTACTGTATTATGAAGGGGTTGGAGATCAACATTGGGAGCATAATCAAGGAAGAGATT
TTAGCCTGTGGAAGGAATAGAGCAGGGTCTGCACTGTCATCGGAAGCCCTAGCCATTGCCTACCGCCAGCTAGATCAAATCAGGGAAAACGTGAAGACATATTGGGCATA
TGCAAAGGAGAGAGATGAAGCCATTAAAGAGTTTATCCCTCTATCGCCCCAAGTATTGCCCCAGTCTTTCCCGATTTCCCTCGATCGCTGCTGCCTCAAGAAGACAAGGA
TTCTGATGATGAAGAAGATGAAAATGATGATGAAGAAGATGAAGACAAAAAGAGTTTCTCGGACGAGGACTAGGGCAGTTTTCTGA
Protein sequenceShow/hide protein sequence
MIRAMGAQRRAALEEEANRRDEEEAAKAVGSSRQMEASTGKTSEPSTNPSSSCRNKPFVAYSARRRSPKKVVPEKPLVIEPLKTARMPPDVFEDIICQAVAKALVIVVGY
RVEHEALKDIEAERELENRHMRKKDEKRRKEAEDFLAAFEPLHKAQSQEEATQAQPADEVFEPLFKDDPPGADSTSSGEKRGEEEKESKEAETSSDSETESDSEIKELDD
DQIPISAALRRERRREIKVERRTKNKNDSIFAKRSRTRSMVSSPAAPPTVSPAKPKAKSPKVPSPKNPFPEEFCAHPQEAVVPLVREFYAYLREESISMVVVRGKMVSFS
SVDINKVYRIKAPLHPRGNDVIRNPSTKQMKEALQLVANKGVQWKESQTKVKTLVPSDLKPESVVWLNFLKNRLMPTTHDSTILVDRVMLLYCIMKGLEINIGSIIKEEI
LACGRNRAGSALSSEALAIAYRQLDQIRENVKTYWAYAKERDEAIKEFIPLSPQVLPQSFPISLDRCCLKKTRILMMKKMKMMMKKMKTKRVSRTRTRAVF