CuGenDBv2

Gene ID	Spg018880
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Beta-galactosidase
Genome location	scaffold3:20894035..20897882
RNA-Seq Expression	Spg018880
Synteny	Spg018880
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0005773 - vacuole (cellular component) GO:0048046 - apoplast (cellular component) GO:0004565 - beta-galactosidase activity (molecular function) GO:0030246 - carbohydrate binding (molecular function)
InterPro domains	IPR001944 - Glycoside hydrolase, family 35 IPR017853 - Glycoside hydrolase superfamily IPR031330 - Glycoside hydrolase 35, catalytic domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022974993.1 beta-galactosidase 9 isoform X1 [Cucurbita maxima]

7.1e-51

80.74

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVRSALILQL SLTL I LLAVS EFFKPFNVSYDHRALIIDGK RMLI AGVHYPR TPEMWPNIIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + LVGSSGLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

XP_022974996.1 beta-galactosidase 9 isoform X3 [Cucurbita maxima]

7.1e-51

80.74

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVRSALILQL SLTL I LLAVS EFFKPFNVSYDHRALIIDGK RMLI AGVHYPR TPEMWPNIIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + LVGSSGLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

XP_023540613.1 beta-galactosidase 9 [Cucurbita pepo subsp. pepo]

2.7e-50

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVRSALILQL SLTL I LLAVS EFFKPFNVSYDHRALIIDGK RMLI AGVHYPR TPEMWPNIIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + LVGS GLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

XP_038874249.1 beta-galactosidase 9 isoform X1 [Benincasa hispida]

1.2e-50

79.26

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVRSALI  LMSLTL IHLLAVS EFFKPFNVSYDHRALIIDGK RMLI AGVHYPR TPEMWP IIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + L+GSSGLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

XP_038874282.1 beta-galactosidase 9 isoform X3 [Benincasa hispida]

1.2e-50

79.26

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVRSALI  LMSLTL IHLLAVS EFFKPFNVSYDHRALIIDGK RMLI AGVHYPR TPEMWP IIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + L+GSSGLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9D3 Beta-galactosidase

2.2e-50

77.78

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVR  LI+QLMSLTL IHLL VS EFFKPFNVSYDHRALIIDGK RMLI AGVHYPR +PEMWP+IIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + LVGSSGLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

A0A5A7U690 Beta-galactosidase

4.9e-50

77.78

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVR  LI+QLMSLTL IHLLAV  E FKPFNVSYDHRALIIDGK RMLI AGVHYPR TPEMWP+IIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + LVGSSGLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

A0A5D3D1C9 Beta-galactosidase

4.9e-50

77.78

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVR  LI+QLMSLTL IHLLAV  E FKPFNVSYDHRALIIDGK RMLI AGVHYPR TPEMWP+IIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + LVGSSGLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

A0A6J1ICZ0 Beta-galactosidase

3.4e-51

80.74

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVRSALILQL SLTL I LLAVS EFFKPFNVSYDHRALIIDGK RMLI AGVHYPR TPEMWPNIIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + LVGSSGLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

A0A6J1IFF4 Beta-galactosidase

3.4e-51

80.74

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Query:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS
        MAVRSALILQL SLTL I LLAVS EFFKPFNVSYDHRALIIDGK RMLI AGVHYPR TPEMWPNIIEK+KEGGADVIQSYVFWNGHEP KGQ    G 
Subjt:  MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GS

Query:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
         + ++    + LVGSSGLYLHLRIGPYVCAEW+FG
Subjt:  VNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

SwissProt top hits

e value

%identity

Alignment

A2X2H7 Beta-galactosidase 4

1.7e-31

60.4

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Query:  VSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSF
        VSYD R+L+I+G+ R+L+   +HYPR TPEMWP +I+K K+GG DVIQ+YVFWNGHEP++GQ   S  +      V LV  +GLY+HLRIGPYVCAEW+F
Subjt:  VSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSF

Query:  G
        G
Subjt:  G

Q0INM3 Beta-galactosidase 15

5.1e-36

64.49

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Query:  FFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYV
        FF+PFNV+YDHRA++I GK RML+ AG+HYPR TPEMWP++I K KEGGADVI++YVFWNGHEP KGQ      F        LV + GL+L LRIGPY 
Subjt:  FFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYV

Query:  CAEWSFG
        CAEW+FG
Subjt:  CAEWSFG

Q6Z6K4 Beta-galactosidase 4

1.7e-31

60.4

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Query:  VSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSF
        VSYD R+L+I+G+ R+L+   +HYPR TPEMWP +I+K K+GG DVIQ+YVFWNGHEP++GQ   S  +      V LV  +GLY+HLRIGPYVCAEW+F
Subjt:  VSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSF

Query:  G
        G
Subjt:  G

Q9SCV3 Beta-galactosidase 9

1.4e-41

64.06

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Query:  ILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GSVNFLQDS
        IL L+ + L+++   +S  +FKPFNVSYDHRALII GK RML+ AG+HYPR TPEMW ++I K+KEGGADV+Q+YVFWNGHEP+KGQ    G  + ++  
Subjt:  ILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GSVNFLQDS

Query:  PVVVLVGSSGLYLHLRIGPYVCAEWSFG
          V L+GSSGLYLHLRIGPYVCAEW+FG
Subjt:  PVVVLVGSSGLYLHLRIGPYVCAEWSFG

Q9SCW1 Beta-galactosidase 1

3.4e-32

63.73

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Query:  NVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWS
        +VSYD RA+ I+GK R+LI   +HYPR TPEMWP++I K KEGG DVIQ+YVFWNGHEP  G+     N+      V LV  SGLYLHLRIGPYVCAEW+
Subjt:  NVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWS

Query:  FG
        FG
Subjt:  FG

Arabidopsis top hits

e value

%identity

Alignment

AT2G28470.1 beta-galactosidase 8

3.5e-32

48.09

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Query:  SALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GSVNFL
        +A ++++  + +++ L+ V        NV+YDHRAL+IDGK ++LI   +HYPR TPEMWP +I+K+K+GG DVI++YVFW+GHEP K +    G  + +
Subjt:  SALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GSVNFL

Query:  QDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG
        +    V L   +GLY+HLRIGPYVCAEW++G
Subjt:  QDSPVVVLVGSSGLYLHLRIGPYVCAEWSFG

AT2G32810.1 beta galactosidase 9

9.9e-43

64.06

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Query:  ILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GSVNFLQDS
        IL L+ + L+++   +S  +FKPFNVSYDHRALII GK RML+ AG+HYPR TPEMW ++I K+KEGGADV+Q+YVFWNGHEP+KGQ    G  + ++  
Subjt:  ILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GSVNFLQDS

Query:  PVVVLVGSSGLYLHLRIGPYVCAEWSFG
          V L+GSSGLYLHLRIGPYVCAEW+FG
Subjt:  PVVVLVGSSGLYLHLRIGPYVCAEWSFG

AT2G32810.2 beta galactosidase 9

9.9e-43

64.06

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Query:  ILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GSVNFLQDS
        IL L+ + L+++   +S  +FKPFNVSYDHRALII GK RML+ AG+HYPR TPEMW ++I K+KEGGADV+Q+YVFWNGHEP+KGQ    G  + ++  
Subjt:  ILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGT--GSVNFLQDS

Query:  PVVVLVGSSGLYLHLRIGPYVCAEWSFG
          V L+GSSGLYLHLRIGPYVCAEW+FG
Subjt:  PVVVLVGSSGLYLHLRIGPYVCAEWSFG

AT3G13750.1 beta galactosidase 1

2.4e-33

63.73

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Query:  NVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWS
        +VSYD RA+ I+GK R+LI   +HYPR TPEMWP++I K KEGG DVIQ+YVFWNGHEP  G+     N+      V LV  SGLYLHLRIGPYVCAEW+
Subjt:  NVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWS

Query:  FG
        FG
Subjt:  FG

AT3G52840.1 beta-galactosidase 2

2.1e-32

60.95

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Query:  VSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVV----LVGSSGLYLHLRIGPYVCA
        V+YDH+ALII+G+ R+LI   +HYPR TPEMWP++I+K KEGG DVIQ+YVFWNGHEP  G       + QD   +V    LV  +GLYL LRIGPYVCA
Subjt:  VSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVV----LVGSSGLYLHLRIGPYVCA

Query:  EWSFG
        EW+FG
Subjt:  EWSFG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGTGCGAAGTGCTTTGATTCTTCAGTTGATGAGTTTGACTCTGATGATTCATCTATTGGCTGTCTCCGACGAGTTTTTCAAGCCTTTCAATGTGAGCTATGACCA
TAGGGCTCTGATCATTGATGGAAAACTCCGCATGCTTATCTTCGCCGGTGTTCATTATCCCCGCCCCACCCCGGAGATGTGGCCTAATATAATTGAGAAGAACAAGGAAG
GTGGGGCGGATGTCATTCAAAGTTACGTGTTTTGGAATGGTCATGAACCAATGAAGGGACAGGGGACAGGTTCAGTAAATTTTTTGCAAGATAGTCCAGTCGTCGTGCTG
GTAGGATCCAGTGGCCTCTACCTTCATTTACGCATTGGACCATACGTGTGTGCAGAGTGGAGTTTCGGGAAAAACGATAGTTGCAAGCCAATTAAACTGACGCTAGAGAA
TGATTTGGCTACCAATGAAGGTTCAGAATTAGAAGAACAAATTATTGACAACCCAATAATTTTAGCATTCAATCTTAAGGTAGATATGTATGAAGCTTATGTTTCTGATG
GGCAAATGACTGCACATATAACTGCTTTTGAGGTTGCAGAAGTCATAGTTGGATATGAAAAGGAGGATTCTAAAATTTATCGCAATTTCATCCTCGCACAAGGAAAAACT
TACAAGTTCCTCATTCGCATGGACAAGAAGTCTAAAGGAGATCGATCAAAGGGGCATTTTGTGGTTCAAGAGATAAATAAAGCACAAGTTGAAGAATGTGACGCTCTTGA
AGTTTTACATGTTAAGAAAAAAATTAAAATAGAAAGATAG

mRNA sequence

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Protein sequence

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MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVL
VGSSGLYLHLRIGPYVCAEWSFGKNDSCKPIKLTLENDLATNEGSELEEQIIDNPIILAFNLKVDMYEAYVSDGQMTAHITAFEVAEVIVGYEKEDSKIYRNFILAQGKT
YKFLIRMDKKSKGDRSKGHFVVQEINKAQVEECDALEVLHVKKKIKIER

Spg018880 (gene) of Sponge gourd (cylindrica) v1 genome