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Spg018885 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018885
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold3:21908102..21908901
RNA-Seq ExpressionSpg018885
SyntenySpg018885
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4378427.1 hypothetical protein F8388_021621 [Cannabis sativa]2.5e-0429.46Show/hide
Query:  MVRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQWSID-----------------------VGKIISNEIYTCWRKKVGKL
        +VR V V +S   IN  F L++     F++     ++  ++  V E+   GA+W ID                       VGK+++  I+ C  +  GKL
Subjt:  MVRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQWSID-----------------------VGKIISNEIYTCWRKKVGKL

Query:  FLPNTITMLCNRVGVPRTPDDVILLDKGI
        F P  IT LC   GVP  P+D  +  KG+
Subjt:  FLPNTITMLCNRVGVPRTPDDVILLDKGI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.2e-0722.54Show/hide
Query:  VRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQW-----------------------------------------------
        VRGV V WS  AIN +F L D P    +E +   +   L   +  +   GA+W                                               
Subjt:  VRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQW-----------------------------------------------

Query:  -------SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNRVGVPRTPDDVILLDKGIIDT-----------------PN-------------------
               SI+VG++I +EI  C  +K G LF P+ IT LC     P   ++  L + G ID                  P+                   
Subjt:  -------SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNRVGVPRTPDDVILLDKGIIDT-----------------PN-------------------

Query:  ---------------------LEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED
                             L++  +  Q FW Y+K +D  L++ALQ+NF +P   F  FP ++L        ++ E E E D
Subjt:  ---------------------LEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]3.9e-0525.99Show/hide
Query:  SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNRVGVPRTPDDVILLDKGIIDT-----------------PN--------------------------
        SI+VG++I +EI  C  +K G LF P+ IT LC     P   ++  L   G ID                  P+                          
Subjt:  SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNRVGVPRTPDDVILLDKGIIDT-----------------PN--------------------------

Query:  --------------LEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED
                      L++  +  Q FW Y+K +D  L++ALQ+NF +P   F  FP +LL        ++ E E E D
Subjt:  --------------LEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.5e-0723.25Show/hide
Query:  VRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQW-----------------------------------------------
        VRGV V WS  AIN +F L D P    +E +   +  +L   +  +   GA+W                                               
Subjt:  VRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQW-----------------------------------------------

Query:  -------SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNR-------------------------------------------VGVPRTPDDVILLDK
               SI+VG++I +EI  C  +K G LF P+ IT LC                                                 RT  DV+   K
Subjt:  -------SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNR-------------------------------------------VGVPRTPDDVILLDK

Query:  GIID-TPNLEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED
         +       E+  +  Q FW Y+K +D  L++ALQ+NF +P   F  FP ++L        ++ E E E D
Subjt:  GIID-TPNLEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-0722.54Show/hide
Query:  VRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQW-----------------------------------------------
        VRGV V WS  AIN +F L D P    +E +   +   L   +  +   GA+W                                               
Subjt:  VRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQW-----------------------------------------------

Query:  -------SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNRVGVPRTPDDVILLDKGIIDT-----------------PN-------------------
               SI+VG++I +EI  C  +K G LF P+ IT LC     P   ++  L + G ID                  P+                   
Subjt:  -------SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNRVGVPRTPDDVILLDKGIIDT-----------------PN-------------------

Query:  ---------------------LEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED
                             L++  +  Q FW Y+K +D  L++ALQ+NF +P   F  FP ++L        ++ E E E D
Subjt:  ---------------------LEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED

A0A2P5CEY2 Uncharacterized protein1.9e-0525.99Show/hide
Query:  SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNRVGVPRTPDDVILLDKGIIDT-----------------PN--------------------------
        SI+VG++I +EI  C  +K G LF P+ IT LC     P   ++  L   G ID                  P+                          
Subjt:  SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNRVGVPRTPDDVILLDKGIIDT-----------------PN--------------------------

Query:  --------------LEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED
                      L++  +  Q FW Y+K +D  L++ALQ+NF +P   F  FP +LL        ++ E E E D
Subjt:  --------------LEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED

A0A2P5DXM3 Uncharacterized protein1.2e-0723.25Show/hide
Query:  VRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQW-----------------------------------------------
        VRGV V WS  AIN +F L D P    +E +   +  +L   +  +   GA+W                                               
Subjt:  VRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQW-----------------------------------------------

Query:  -------SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNR-------------------------------------------VGVPRTPDDVILLDK
               SI+VG++I +EI  C  +K G LF P+ IT LC                                                 RT  DV+   K
Subjt:  -------SIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNR-------------------------------------------VGVPRTPDDVILLDK

Query:  GIID-TPNLEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED
         +       E+  +  Q FW Y+K +D  L++ALQ+NF +P   F  FP ++L        ++ E E E D
Subjt:  GIID-TPNLEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEED

A0A7J6G6G2 Fanconi-associated nuclease1.2e-0429.46Show/hide
Query:  MVRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQWSID-----------------------VGKIISNEIYTCWRKKVGKL
        +VR V V +S   IN  F L++     F++     ++  ++  V E+   GA+W ID                       VGK+++  I+ C  +  GKL
Subjt:  MVRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQWSID-----------------------VGKIISNEIYTCWRKKVGKL

Query:  FLPNTITMLCNRVGVPRTPDDVILLDKGI
        F P  IT LC   GVP  P+D  +  KG+
Subjt:  FLPNTITMLCNRVGVPRTPDDVILLDKGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCGAGGGGTGGCTGTTGATTGGAGCCTAGGAGCAATCAATTATCTTTTCAACCTCCAAGACTTTCCGCATGTTGGGTTTAATGAGATGGTGGTGGCACCATCTAA
CGACCAATTGAACGCAACTGTGAGGGAGATTGGCATTGAAGGGGCTCAATGGAGTATTGATGTTGGAAAAATTATCTCGAATGAAATCTATACTTGCTGGCGAAAGAAGG
TTGGTAAATTATTCCTCCCAAATACAATCACAATGCTTTGCAATAGGGTAGGGGTGCCTAGAACTCCAGACGATGTCATTCTGCTTGACAAGGGGATTATTGATACACCC
AACCTAGAGTATGCTGGGAGGCATGCTCAGACCTTCTGGACCTATGCTAAAAGAAAGGATGCCACGCTTAGGAGGGCCTTGCAATCTAATTTTTTAAAGCCTTATCAAGC
CTTCCGAGTATTCCCCGATGACCTGCTCAATCCCTGGATTCCTCCCCCGCCAGTTGAAAGAGAGGAAGAAGAGGAGGAAGATCTAGCAGTTTGGAAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCGAGGGGTGGCTGTTGATTGGAGCCTAGGAGCAATCAATTATCTTTTCAACCTCCAAGACTTTCCGCATGTTGGGTTTAATGAGATGGTGGTGGCACCATCTAA
CGACCAATTGAACGCAACTGTGAGGGAGATTGGCATTGAAGGGGCTCAATGGAGTATTGATGTTGGAAAAATTATCTCGAATGAAATCTATACTTGCTGGCGAAAGAAGG
TTGGTAAATTATTCCTCCCAAATACAATCACAATGCTTTGCAATAGGGTAGGGGTGCCTAGAACTCCAGACGATGTCATTCTGCTTGACAAGGGGATTATTGATACACCC
AACCTAGAGTATGCTGGGAGGCATGCTCAGACCTTCTGGACCTATGCTAAAAGAAAGGATGCCACGCTTAGGAGGGCCTTGCAATCTAATTTTTTAAAGCCTTATCAAGC
CTTCCGAGTATTCCCCGATGACCTGCTCAATCCCTGGATTCCTCCCCCGCCAGTTGAAAGAGAGGAAGAAGAGGAGGAAGATCTAGCAGTTTGGAAAAGTTGA
Protein sequenceShow/hide protein sequence
MVRGVAVDWSLGAINYLFNLQDFPHVGFNEMVVAPSNDQLNATVREIGIEGAQWSIDVGKIISNEIYTCWRKKVGKLFLPNTITMLCNRVGVPRTPDDVILLDKGIIDTP
NLEYAGRHAQTFWTYAKRKDATLRRALQSNFLKPYQAFRVFPDDLLNPWIPPPPVEREEEEEEDLAVWKS