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Spg018903 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018903
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleolar protein 58-like
Genome locationscaffold12:25993428..25996303
RNA-Seq ExpressionSpg018903
SyntenySpg018903
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.5e-1237.62Show/hide
Query:  LKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLSLIKK
        L P A VW + +K+R++PTTH  T+S++R++LL++   G  +N+GR+I  EI +C  +  G LFFP+LI ++C+ A       EEK      ID   + +
Subjt:  LKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLSLIKK

Query:  L
        +
Subjt:  L

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]1.3e-1238.1Show/hide
Query:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLS
        L   L P A +W + +K+R++PTTH   +S+ERV+LLY+   G  +N+GR+I  EI +C  +  G LFFP+LI ++C+ A       EEK      ID  
Subjt:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLS

Query:  LIKKL
         + ++
Subjt:  LIKKL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.5e-1338.83Show/hide
Query:  GDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLSLI
        G L P A VW + +K+R++PTTH  T+S++R++LLY+   G  +N+GR+I  EI +C  +  G LFFP+LI ++C+ A       EEK      ID   +
Subjt:  GDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLSLI

Query:  KKL
         ++
Subjt:  KKL

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]2.2e-1239.05Show/hide
Query:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLS
        L   L P A VW + +K+R++PTTH   +S+E V+LLY+   G  +N+GRII  EI +C  +  G LFFP+LI ++C+ A       EEK      ID  
Subjt:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLS

Query:  LIKKL
         + ++
Subjt:  LIKKL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.8e-1242.22Show/hide
Query:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEK
        L   L P A VW + +K+R++PTTH  T+S+E V LLY+   G  +N+GR+I  EI +C  +  G LFFP+LI  +C+         EEK
Subjt:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEK

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.2e-1237.62Show/hide
Query:  LKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLSLIKK
        L P A VW + +K+R++PTTH  T+S++R++LL++   G  +N+GR+I  EI +C  +  G LFFP+LI ++C+ A       EEK      ID   + +
Subjt:  LKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLSLIKK

Query:  L
        +
Subjt:  L

A0A2P5BNT0 Uncharacterized protein (Fragment)6.4e-1338.1Show/hide
Query:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLS
        L   L P A +W + +K+R++PTTH   +S+ERV+LLY+   G  +N+GR+I  EI +C  +  G LFFP+LI ++C+ A       EEK      ID  
Subjt:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLS

Query:  LIKKL
         + ++
Subjt:  LIKKL

A0A2P5CEY2 Uncharacterized protein2.2e-1338.83Show/hide
Query:  GDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLSLI
        G L P A VW + +K+R++PTTH  T+S++R++LLY+   G  +N+GR+I  EI +C  +  G LFFP+LI ++C+ A       EEK      ID   +
Subjt:  GDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLSLI

Query:  KKL
         ++
Subjt:  KKL

A0A2P5CXU3 Uncharacterized protein (Fragment)1.1e-1239.05Show/hide
Query:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLS
        L   L P A VW + +K+R++PTTH   +S+E V+LLY+   G  +N+GRII  EI +C  +  G LFFP+LI ++C+ A       EEK      ID  
Subjt:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLS

Query:  LIKKL
         + ++
Subjt:  LIKKL

A0A2P5DAQ2 Uncharacterized protein1.9e-1242.22Show/hide
Query:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEK
        L   L P A VW + +K+R++PTTH  T+S+E V LLY+   G  +N+GR+I  EI +C  +  G LFFP+LI  +C+         EEK
Subjt:  LSGDLKPEATVWLYVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCACAGACTGAAAAGTGGTCGGCGTCTCGACGCTAGCCACGGTGTTTCGACGTCATGCCTATTTTTAGCGTGCTTCGACTTCATTCCACATCTTTTCTTGTTCGA
TTCGGGCCTCGAACCTTTGACTCCTTGGAATTATTCTTCGGGCTCGTCACGATCCTCACGATCTTCTCACCTCCTCGAGATTCATGGTCCTCAATGTATACTTGCACTTA
GCTTGACTAAATTCATCTTTAATTATTATTTTCCCATCATATTTCCTACCTCCACCTTCAATCCAGATAGCCTATCAGGGGATTTAAAGCCAGAGGCAACAGTCTGGCTG
TACGTGATCAAGAATAGGATCATGCCAACAACACATAACACCACCATATCTCAAGAGCGTGTCATGTTGTTGTACAACAAGCACAAGGGATTGGATCTGAACCTTGGACG
GATCATATGGATGGAGATTCTCTCTTGTGGGCACAAAAATGTGGGAAGGCTATTCTTTCCAACCTTGATCAACAAGATATGCAAGTTTGCAGGAGTGGAGCTAGAAGAGA
AAGAAGAAAAAGAAGTTGCCCGGACTTCGATTGACTTGAGCTTAATCAAGAAGCTCATAGCCAACTCCAACCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCACAGACTGAAAAGTGGTCGGCGTCTCGACGCTAGCCACGGTGTTTCGACGTCATGCCTATTTTTAGCGTGCTTCGACTTCATTCCACATCTTTTCTTGTTCGA
TTCGGGCCTCGAACCTTTGACTCCTTGGAATTATTCTTCGGGCTCGTCACGATCCTCACGATCTTCTCACCTCCTCGAGATTCATGGTCCTCAATGTATACTTGCACTTA
GCTTGACTAAATTCATCTTTAATTATTATTTTCCCATCATATTTCCTACCTCCACCTTCAATCCAGATAGCCTATCAGGGGATTTAAAGCCAGAGGCAACAGTCTGGCTG
TACGTGATCAAGAATAGGATCATGCCAACAACACATAACACCACCATATCTCAAGAGCGTGTCATGTTGTTGTACAACAAGCACAAGGGATTGGATCTGAACCTTGGACG
GATCATATGGATGGAGATTCTCTCTTGTGGGCACAAAAATGTGGGAAGGCTATTCTTTCCAACCTTGATCAACAAGATATGCAAGTTTGCAGGAGTGGAGCTAGAAGAGA
AAGAAGAAAAAGAAGTTGCCCGGACTTCGATTGACTTGAGCTTAATCAAGAAGCTCATAGCCAACTCCAACCACTAG
Protein sequenceShow/hide protein sequence
MGHRLKSGRRLDASHGVSTSCLFLACFDFIPHLFLFDSGLEPLTPWNYSSGSSRSSRSSHLLEIHGPQCILALSLTKFIFNYYFPIIFPTSTFNPDSLSGDLKPEATVWL
YVIKNRIMPTTHNTTISQERVMLLYNKHKGLDLNLGRIIWMEILSCGHKNVGRLFFPTLINKICKFAGVELEEKEEKEVARTSIDLSLIKKLIANSNH