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Spg018926 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018926
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold12:26713355..26714071
RNA-Seq ExpressionSpg018926
SyntenySpg018926
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]2.7e-3340.67Show/hide
Query:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK
        +G + ER+A        GS     S + + S    RRTRG SRN+ELDR+V IHG+I IEI +E+ KPVC NA KFS AIG I R +  +R   W  V K
Subjt:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK

Query:  DARDHLK-------------------QCLL--------NHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILC
        + RD +                    +CL+        ++F FD+ KK V +++   +Q  FKEYR+   KHYR++  P+E RA P  R+ D  DW++LC
Subjt:  DARDHLK-------------------QCLL--------NHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILC

Query:  NRWEDPKWK
        NRWE P+WK
Subjt:  NRWEDPKWK

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]1.1e-3746.7Show/hide
Query:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK
        +G + ER+A        GS     S + + S    RRTRG SRN+ELDR+V IHG+I IEI +E+ KPVC NA KFS AIG I R +  +R   W  V K
Subjt:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK

Query:  DARDHLKQCLLNHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK
        + RD +   LL++F FD+ KK V +++   +Q  FKEYR+   KHYR++  P+E RA P  R+ D  DW++LCNRWE P+WK
Subjt:  DARDHLKQCLLNHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK

XP_038887410.1 poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]2.7e-3340.67Show/hide
Query:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK
        +G + ER+A        GS     S + + S    RRTRG SRN+ELDR+V IHG+I IEI +E+ KPVC NA KFS AIG I R +  +R   W  V K
Subjt:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK

Query:  DARDHLK-------------------QCLL--------NHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILC
        + RD +                    +CL+        ++F FD+ KK V +++   +Q  FKEYR+   KHYR++  P+E RA P  R+ D  DW++LC
Subjt:  DARDHLK-------------------QCLL--------NHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILC

Query:  NRWEDPKWK
        NRWE P+WK
Subjt:  NRWEDPKWK

XP_038887411.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]2.7e-3340.67Show/hide
Query:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK
        +G + ER+A        GS     S + + S    RRTRG SRN+ELDR+V IHG+I IEI +E+ KPVC NA KFS AIG I R +  +R   W  V K
Subjt:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK

Query:  DARDHLK-------------------QCLL--------NHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILC
        + RD +                    +CL+        ++F FD+ KK V +++   +Q  FKEYR+   KHYR++  P+E RA P  R+ D  DW++LC
Subjt:  DARDHLK-------------------QCLL--------NHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILC

Query:  NRWEDPKWK
        NRWE P+WK
Subjt:  NRWEDPKWK

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]2.7e-3340.67Show/hide
Query:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK
        +G + ER+A        GS     S + + S    RRTRG SRN+ELDR+V IHG+I IEI +E+ KPVC NA KFS AIG I R +  +R   W  V K
Subjt:  VGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPK

Query:  DARDHLK-------------------QCLL--------NHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILC
        + RD +                    +CL+        ++F FD+ KK V +++   +Q  FKEYR+   KHYR++  P+E RA P  R+ D  DW++LC
Subjt:  DARDHLK-------------------QCLL--------NHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILC

Query:  NRWEDPKWK
        NRWE P+WK
Subjt:  NRWEDPKWK

TrEMBL top hitse value%identityAlignment
A0A5A7SPZ3 Transposase3.2e-2440.14Show/hide
Query:  RRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKVVHEFIDHEMQTIF
        R  RG+ RNIELD++V+ HGK+ IEI +E  KPV   A K +  IG  VR +  +    WKA+P D ++ +      HF FD +  +V +++D +MQ IF
Subjt:  RRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKVVHEFIDHEMQTIF

Query:  KEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK
        +E+RA   K+Y ++    E RA+P P  +   DW+++C+RWE   WK
Subjt:  KEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK

A0A5A7TFG0 Transposon protein, putative, CACTA, En/Spm sub-class2.9e-2542.18Show/hide
Query:  RRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKVVHEFIDHEMQTIF
        R  RG+ RNIELD++V  HGKI IEI +E  KPV   A K +  IG  +R +  +    WKAVP   R+ +   L  HF FD +  VV ++++ +MQ IF
Subjt:  RRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKVVHEFIDHEMQTIF

Query:  KEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK
        +E+RA   K+Y Q+    E RA+P P  +   DW+++C+RWE   WK
Subjt:  KEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK

A0A5A7TRX4 DUF4216 domain-containing protein3.4e-2641.56Show/hide
Query:  ETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKVVHEFID
        ++SD+  R  RG+ RNIELD++V  HGKI IEI +E  KPV   A K +  IG  VR +  +    WKAVP   R+ +   L  HF FD +  VV ++++
Subjt:  ETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKVVHEFID

Query:  HEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK
         +MQ  F+E+RA   K+Y Q+    E RA+P  R+    DW+++C+RWE   WK
Subjt:  HEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK

A0A5A7US78 Uncharacterized protein1.1e-2441.5Show/hide
Query:  RRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKVVHEFIDHEMQTIF
        R  RG+ RNIELD++V+ HGKI IEI +E  KPV     K +  IG  VR +  +    WKAVP   R+ +   L  HF FD +  VV ++++ +MQ  F
Subjt:  RRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKVVHEFIDHEMQTIF

Query:  KEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK
        +E+RA   K+Y Q+    E RA+P P  +   DW+++C+RWE   WK
Subjt:  KEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWK

A0A5D3C6Z8 CACTA en-spm transposon protein7.9e-2340Show/hide
Query:  TVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKV
        T SS+ +T+ T  RR +  SR +EL+R+V I+G+I + I     KP+  +AV+FS AIG  VR++F VR   W  V ++  + +K  L   F+ D + + 
Subjt:  TVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQCLLNHFIFDLSKKV

Query:  VHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVD-IADWHILCNRW
        ++ F++H+M T FKE+RA   KH+++YS PEE RA+P   +V    DWH LC+ +
Subjt:  VHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVD-IADWHILCNRW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGTCCGACTGAGGAGCGCAATGCAGATCGATTTTTTGCTGAGGGTGAAGGCAGTCATGTCGCCACAGTATCTTCCACTGGCGAGACATCAGATACGTCTGCACG
TAGAACGAGAGGATTTTCTAGGAATATTGAGCTGGACAGATACGTTCGAATCCATGGGAAGATAACTATCGAGATCACCGACGAGTTGAGAAAGCCAGTGTGTGACAATG
CAGTAAAATTCAGCGGTGCCATTGGTAAAATTGTCAGAGAATCATTCTCTGTACGTTATGCAACGTGGAAAGCTGTACCGAAGGACGCAAGGGATCATCTTAAACAATGT
CTTTTGAATCATTTCATATTTGATTTATCTAAGAAGGTGGTACACGAATTCATTGATCACGAGATGCAAACCATTTTTAAAGAGTACCGGGCAAAGTGGGTCAAACACTA
TCGACAATATTCCACTCCAGAGGAGGGACGTGCACACCCACATCCTCGAGTGGTTGACATAGCTGATTGGCATATTCTGTGCAATAGATGGGAGGACCCCAAGTGGAAGG
TACGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGTCCGACTGAGGAGCGCAATGCAGATCGATTTTTTGCTGAGGGTGAAGGCAGTCATGTCGCCACAGTATCTTCCACTGGCGAGACATCAGATACGTCTGCACG
TAGAACGAGAGGATTTTCTAGGAATATTGAGCTGGACAGATACGTTCGAATCCATGGGAAGATAACTATCGAGATCACCGACGAGTTGAGAAAGCCAGTGTGTGACAATG
CAGTAAAATTCAGCGGTGCCATTGGTAAAATTGTCAGAGAATCATTCTCTGTACGTTATGCAACGTGGAAAGCTGTACCGAAGGACGCAAGGGATCATCTTAAACAATGT
CTTTTGAATCATTTCATATTTGATTTATCTAAGAAGGTGGTACACGAATTCATTGATCACGAGATGCAAACCATTTTTAAAGAGTACCGGGCAAAGTGGGTCAAACACTA
TCGACAATATTCCACTCCAGAGGAGGGACGTGCACACCCACATCCTCGAGTGGTTGACATAGCTGATTGGCATATTCTGTGCAATAGATGGGAGGACCCCAAGTGGAAGG
TACGTTAA
Protein sequenceShow/hide protein sequence
MVGPTEERNADRFFAEGEGSHVATVSSTGETSDTSARRTRGFSRNIELDRYVRIHGKITIEITDELRKPVCDNAVKFSGAIGKIVRESFSVRYATWKAVPKDARDHLKQC
LLNHFIFDLSKKVVHEFIDHEMQTIFKEYRAKWVKHYRQYSTPEEGRAHPHPRVVDIADWHILCNRWEDPKWKVR