; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018959 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018959
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionycf20-like protein
Genome locationscaffold12:24167741..24168208
RNA-Seq ExpressionSpg018959
SyntenySpg018959
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007572 - Uncharacterised protein family Ycf20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579671.1 hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia]3.4e-7492.9Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQ+ SLVSTGLL+Y FTP+ N SYWRYDMIKSRPSPRSL IKA QDTGGPRRLVDIIRLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_004143642.1 uncharacterized protein ycf20 [Cucumis sativus]1.1e-7292.31Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPS-PRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQ+ SLV T LL+Y FTPKMN SYWRYDM+KSRPS PRS R+KA QDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPS-PRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_022928979.1 uncharacterized protein ycf20 [Cucurbita moschata]5.8e-7492.9Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQ+ SLVSTGLL+Y FTP+ N SYWRYD+IKSRPSPRSL IKA QDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_022969949.1 uncharacterized protein ycf20 [Cucurbita maxima]4.5e-7492.9Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQ+ SLVSTGLL+Y FTP+ N SYWRYD+IKSRPSPRSL IKA QDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_023549885.1 uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo]1.0e-7392.26Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQ+ SLVSTGLL+Y FTP+ N SYWRYD+IKSRPSPRSL IKA QDTGGPRRLVDIIRLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPS1 Uncharacterized protein5.3e-7392.31Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPS-PRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQ+ SLV T LL+Y FTPKMN SYWRYDM+KSRPS PRS R+KA QDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPS-PRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A1S3CT33 uncharacterized protein ycf20 isoform X14.5e-7291.67Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPS-PRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQ+ SLV TGLL+Y F+ KMN SYWRYDM+KSRPS PRS R+KA QDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPS-PRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A5D3BMH1 Ycf20-like protein isoform X13.1e-6595.59Show/hide
Query:  MNVSYWRYDMIKSRPS-PRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
        MN SYWRYDM+KSRPS PRS R+KA QDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Subjt:  MNVSYWRYDMIKSRPS-PRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT

Query:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A6J1ESY7 uncharacterized protein ycf202.8e-7492.9Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQ+ SLVSTGLL+Y FTP+ N SYWRYD+IKSRPSPRSL IKA QDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A6J1I440 uncharacterized protein ycf202.2e-7492.9Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
        MAQ+ SLVSTGLL+Y FTP+ N SYWRYD+IKSRPSPRSL IKA QDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGAL

Query:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

SwissProt top hitse value%identityAlignment
P51214 Uncharacterized protein ycf205.8e-0847.44Show/hide
Query:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        G ISLL GF+++  +S   G  G   +IAA + V   E V++  YS + K    I LLNN K+G TYGLF+DAFKL S
Subjt:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

P72983 Ycf20-like protein2.6e-0835.24Show/hide
Query:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDA
        RL  I+ +  +    +FR+P RR     +S L GF+V   ++ + G     DV+ A   +L  E V R++Y R          +LN FKMG +Y LF++A
Subjt:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDA

Query:  FKLAS
        FKL S
Subjt:  FKLAS

Q1XDS2 Uncharacterized protein ycf204.0e-0942.27Show/hide
Query:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDAFKLAS
        L+  L+   + S S     G ISLL GF+++  +S   G  G   +IAA + V  TE  ++  YS  K +   I L NNFK+G TYGLF+DAFKL S
Subjt:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDAFKLAS

Q9MUL5 Uncharacterized protein ycf203.0e-0437.8Show/hide
Query:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPIALL-----NNFKMGFTYGLFIDAFKLAS
        LL GF++A  ++  FG  G  DV+ A + V + E +    YS+     K  F I+ L     N  K+G  +GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPIALL-----NNFKMGFTYGLFIDAFKLAS

Arabidopsis top hitse value%identityAlignment
AT1G65420.1 Protein of unknown function (DUF565)1.8e-0435Show/hide
Query:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LL GFY A  ++   G  G  DV+ A + V   E +    Y +P       K+   +  +N +K G   GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPIALLNNFKMGFTYGLFIDAFKLAS

AT5G43050.1 Protein of unknown function (DUF565)6.7e-5269.62Show/hide
Query:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLR-IKAAQDTGG--PRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF
        MA ++S +ST L           S+  +     +   R  R I+A Q+T G  PRRL+DIIR VPE+SRNYF+ PSRR LFGGISLLGGFYVAQTISLSF
Subjt:  MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLR-IKAAQDTGG--PRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF

Query:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GALGVNDVIAAV+CVLLTEYVTRFYYSR  VTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAGACTGTAAGTTTAGTCTCTACTGGCCTCCTAGATTATTGCTTTACTCCTAAAATGAATGTTTCCTATTGGAGATATGATATGATAAAATCACGACCATCCCC
TCGTAGTCTTCGTATCAAAGCTGCACAAGATACCGGAGGTCCTCGTAGGTTAGTTGATATCATTAGACTCGTGCCCGAGCTCTCGAGAAATTATTTTCGAAGTCCTTCGA
GGAGGGCTCTCTTTGGAGGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAGACTATATCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTGATTGCTGCTGTTGTG
TGTGTTCTGCTTACCGAGTATGTTACTCGATTTTATTACAGTCGACCGAAAGTAACTTTCCCCATTGCTCTACTGAACAACTTCAAAATGGGTTTCACTTATGGTCTCTT
CATTGATGCTTTCAAACTTGCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAGACTGTAAGTTTAGTCTCTACTGGCCTCCTAGATTATTGCTTTACTCCTAAAATGAATGTTTCCTATTGGAGATATGATATGATAAAATCACGACCATCCCC
TCGTAGTCTTCGTATCAAAGCTGCACAAGATACCGGAGGTCCTCGTAGGTTAGTTGATATCATTAGACTCGTGCCCGAGCTCTCGAGAAATTATTTTCGAAGTCCTTCGA
GGAGGGCTCTCTTTGGAGGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAGACTATATCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTGATTGCTGCTGTTGTG
TGTGTTCTGCTTACCGAGTATGTTACTCGATTTTATTACAGTCGACCGAAAGTAACTTTCCCCATTGCTCTACTGAACAACTTCAAAATGGGTTTCACTTATGGTCTCTT
CATTGATGCTTTCAAACTTGCTAGTTAA
Protein sequenceShow/hide protein sequence
MAQTVSLVSTGLLDYCFTPKMNVSYWRYDMIKSRPSPRSLRIKAAQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVV
CVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS