; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018966 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018966
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold12:25693706..25695228
RNA-Seq ExpressionSpg018966
SyntenySpg018966
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]5.4e-0927.78Show/hide
Query:  FINDLARAKYRDMLKRDFLFERGF------GEDLPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR--
        F+++ A+  Y+ +  R   FE GF        +L   +   +T H W +F   P PVN+ IV+EFY+NI +     VMVRG+++ ++P AIN  F L+  
Subjt:  FINDLARAKYRDMLKRDFLFERGF------GEDLPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR--

Query:  DFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQRRFSKTEKSTFQAAYLKSEANTWLGFDKGK
        D  +  F + V    ++     +  + + G +    + ++ T     L      W  F K K
Subjt:  DFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQRRFSKTEKSTFQAAYLKSEANTWLGFDKGK

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]2.4e-0934.88Show/hide
Query:  NDLARAKYRDMLK-RDFLFERGFGED------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLRDFP
        ++ A  +Y + ++ R    E+GF  D       P F+   IT H W  FC  PE + + +VREFYAN+ + +   V VRGV V  S  AIN+++ L D P
Subjt:  NDLARAKYRDMLK-RDFLFERGFGED------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLRDFP

Query:  HAGFNEMVVAPSNDQLNAAVRKVGIEGAQ
            +E V A +  +L   +  V I GA+
Subjt:  HAGFNEMVVAPSNDQLNAAVRKVGIEGAQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.4e-1134.36Show/hide
Query:  RFINDLARAKYRDMLK-RDFLFERGFGED-------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNL
        +F  + A  +Y + ++ R    E+GF  D       LP F+   IT H W QFC  PE     +VREFYAN+ D E   V VRGV V WS  AIN++F L
Subjt:  RFINDLARAKYRDMLK-RDFLFERGFGED-------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNL

Query:  RDFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQRRFSKTEKSTFQAAYLKSEANTWLGFDKGK
         D P    +E +   +   L   +  V   GA+   S     T   + L   A  W  F K +
Subjt:  RDFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQRRFSKTEKSTFQAAYLKSEANTWLGFDKGK

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]9.3e-0934.85Show/hide
Query:  RFINDLARAKYRDMLK-RDFLFERGFGED------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR
        +F ++ A  +Y + ++ R    E+GF  D       P F+   IT H W  FC  PE     +VREFYAN+ + +   V VRGV V  S  AIN+++ L 
Subjt:  RFINDLARAKYRDMLK-RDFLFERGFGED------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR

Query:  DFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQ
        D P    +E V A +  +L   +  V I GA+
Subjt:  DFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQ

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]2.1e-0840.71Show/hide
Query:  RFINDLARAKYRDMLKRDFL-FERGF----GEDL--PHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR
        +F ++ A A+Y + +K   L  E+GF     E L  P F+   I  H W  FC   E     +VREFYAN+ D E   V V+GV V WS  AIN+LF L 
Subjt:  RFINDLARAKYRDMLKRDFL-FERGF----GEDL--PHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR

Query:  D--FPHAGFNEMV
        D    H+ F E V
Subjt:  D--FPHAGFNEMV

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein1.2e-0934.88Show/hide
Query:  NDLARAKYRDMLK-RDFLFERGFGED------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLRDFP
        ++ A  +Y + ++ R    E+GF  D       P F+   IT H W  FC  PE + + +VREFYAN+ + +   V VRGV V  S  AIN+++ L D P
Subjt:  NDLARAKYRDMLK-RDFLFERGFGED------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLRDFP

Query:  HAGFNEMVVAPSNDQLNAAVRKVGIEGAQ
            +E V A +  +L   +  V I GA+
Subjt:  HAGFNEMVVAPSNDQLNAAVRKVGIEGAQ

A0A2P5BCG4 Uncharacterized protein (Fragment)1.7e-1134.36Show/hide
Query:  RFINDLARAKYRDMLK-RDFLFERGFGED-------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNL
        +F  + A  +Y + ++ R    E+GF  D       LP F+   IT H W QFC  PE     +VREFYAN+ D E   V VRGV V WS  AIN++F L
Subjt:  RFINDLARAKYRDMLK-RDFLFERGFGED-------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNL

Query:  RDFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQRRFSKTEKSTFQAAYLKSEANTWLGFDKGK
         D P    +E +   +   L   +  V   GA+   S     T   + L   A  W  F K +
Subjt:  RDFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQRRFSKTEKSTFQAAYLKSEANTWLGFDKGK

A0A2P5CXV1 Uncharacterized protein4.5e-0934.85Show/hide
Query:  RFINDLARAKYRDMLK-RDFLFERGFGED------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR
        +F ++ A  +Y + ++ R    E+GF  D       P F+   IT H W  FC  PE     +VREFYAN+ + +   V VRGV V  S  AIN+++ L 
Subjt:  RFINDLARAKYRDMLK-RDFLFERGFGED------LPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR

Query:  DFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQ
        D P    +E V A +  +L   +  V I GA+
Subjt:  DFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQ

A0A2P5EYL5 Uncharacterized protein1.0e-0840.71Show/hide
Query:  RFINDLARAKYRDMLKRDFL-FERGF----GEDL--PHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR
        +F ++ A A+Y + +K   L  E+GF     E L  P F+   I  H W  FC   E     +VREFYAN+ D E   V V+GV V WS  AIN+LF L 
Subjt:  RFINDLARAKYRDMLKRDFL-FERGF----GEDL--PHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR

Query:  D--FPHAGFNEMV
        D    H+ F E V
Subjt:  D--FPHAGFNEMV

A0A6A2ZUE4 Uncharacterized protein2.6e-0927.78Show/hide
Query:  FINDLARAKYRDMLKRDFLFERGF------GEDLPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR--
        F+++ A+  Y+ +  R   FE GF        +L   +   +T H W +F   P PVN+ IV+EFY+NI +     VMVRG+++ ++P AIN  F L+  
Subjt:  FINDLARAKYRDMLKRDFLFERGF------GEDLPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANIDDQEGFQVMVRGVAVDWSPGAINSLFNLR--

Query:  DFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQRRFSKTEKSTFQAAYLKSEANTWLGFDKGK
        D  +  F + V    ++     +  + + G +    + ++ T     L      W  F K K
Subjt:  DFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQRRFSKTEKSTFQAAYLKSEANTWLGFDKGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGGAAGAAGAGGTGTCGGTTACACCTGAGGCACCAAAGACAACAACGAAAAGAAGGAAAACACCAGAAGAAATGGAAGCCAAAAGACGGAGAAGGCAATAGAGA
GCTGAACCAACAGAGAGTGGCTGAACAGCCTAAAGAACCTGAAGAAGCGGCTGGGGGAGAGCAGCCGAAGGAACCAGAAGAGGGGATAATTACAGAGCAGGGTGATCAAA
CGGCCGAAATTCAGAAGGAAGTTCAGGAAAGGCAAGCAGAGGATGTGCCAGAACAAGGAAACGGTCAAGGAGCACAAGAGCAGCAGGTTCAGGCGGAGACTGTGTCGGAT
CCACCACGTCGCCGCCGTCGTAAGCAAAAGGCGGGACGTATCAAGGTGCATCAAGAAGACAAGGGCAAAGGAGTTGCTGAAGCAGCGGTCGAAATAGAGGAGGTTGAGTC
TGAGGAGCCCAGAATGCCATATGCGCGCTTCATCAATGATCTTGCCCGAGCAAAATACAGGGACATGTTGAAACGGGATTTTCTTTTTGAGAGAGGATTCGGTGAGGACT
TACCTCATTTCTTGCGTGCTGGTATTACCAATCATGGATGGGATCAGTTTTGCACAAAGCCAGAGCCGGTAAATTCAAACATTGTTCGAGAATTTTACGCGAACATAGAT
GATCAAGAAGGATTTCAAGTCATGGTCAGAGGAGTGGCTGTTGATTGGAGCCCAGGAGCAATCAACTCTCTTTTCAACCTCCGAGACTTTCCACATGCTGGATTTAATGA
GATGGTGGTAGCACCATCTAACGATCAATTGAACGCGGCAGTGCGAAAGGTTGGCATTGAAGGGGCCCAACGGAGGTTCTCGAAGACAGAGAAGAGCACGTTCCAAGCGG
CTTATCTGAAGAGTGAAGCGAACACATGGTTGGGCTTTGATAAGGGAAAAGCTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAAATGAAATGCGACCGC
ATTTCTGGAAAAACAGAGGCCGTTTTGAGTCGCACGCGGATCGTTGTTGACGAGTCTTCTTCGCACCTAACTGATTGGGCAACCTTCCAACACCTATTTCGTAGCTCCTC
AACCACTTTCTACACTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGGAAGAAGAGGTGTCGGTTACACCTGAGGCACCAAAGACAACAACGAAAAGAAGGAAAACACCAGAAGAAATGGAAGCCAAAAGACGGAGAAGGCAATAGAGA
GCTGAACCAACAGAGAGTGGCTGAACAGCCTAAAGAACCTGAAGAAGCGGCTGGGGGAGAGCAGCCGAAGGAACCAGAAGAGGGGATAATTACAGAGCAGGGTGATCAAA
CGGCCGAAATTCAGAAGGAAGTTCAGGAAAGGCAAGCAGAGGATGTGCCAGAACAAGGAAACGGTCAAGGAGCACAAGAGCAGCAGGTTCAGGCGGAGACTGTGTCGGAT
CCACCACGTCGCCGCCGTCGTAAGCAAAAGGCGGGACGTATCAAGGTGCATCAAGAAGACAAGGGCAAAGGAGTTGCTGAAGCAGCGGTCGAAATAGAGGAGGTTGAGTC
TGAGGAGCCCAGAATGCCATATGCGCGCTTCATCAATGATCTTGCCCGAGCAAAATACAGGGACATGTTGAAACGGGATTTTCTTTTTGAGAGAGGATTCGGTGAGGACT
TACCTCATTTCTTGCGTGCTGGTATTACCAATCATGGATGGGATCAGTTTTGCACAAAGCCAGAGCCGGTAAATTCAAACATTGTTCGAGAATTTTACGCGAACATAGAT
GATCAAGAAGGATTTCAAGTCATGGTCAGAGGAGTGGCTGTTGATTGGAGCCCAGGAGCAATCAACTCTCTTTTCAACCTCCGAGACTTTCCACATGCTGGATTTAATGA
GATGGTGGTAGCACCATCTAACGATCAATTGAACGCGGCAGTGCGAAAGGTTGGCATTGAAGGGGCCCAACGGAGGTTCTCGAAGACAGAGAAGAGCACGTTCCAAGCGG
CTTATCTGAAGAGTGAAGCGAACACATGGTTGGGCTTTGATAAGGGAAAAGCTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAAATGAAATGCGACCGC
ATTTCTGGAAAAACAGAGGCCGTTTTGAGTCGCACGCGGATCGTTGTTGACGAGTCTTCTTCGCACCTAACTGATTGGGCAACCTTCCAACACCTATTTCGTAGCTCCTC
AACCACTTTCTACACTATATAA
Protein sequenceShow/hide protein sequence
MMRKKRCRLHLRHQRQQRKEGKHQKKWKPKDGEGNRELNQQRVAEQPKEPEEAAGGEQPKEPEEGIITEQGDQTAEIQKEVQERQAEDVPEQGNGQGAQEQQVQAETVSD
PPRRRRRKQKAGRIKVHQEDKGKGVAEAAVEIEEVESEEPRMPYARFINDLARAKYRDMLKRDFLFERGFGEDLPHFLRAGITNHGWDQFCTKPEPVNSNIVREFYANID
DQEGFQVMVRGVAVDWSPGAINSLFNLRDFPHAGFNEMVVAPSNDQLNAAVRKVGIEGAQRRFSKTEKSTFQAAYLKSEANTWLGFDKGKAGIPQKCDRISGKAKMKCDR
ISGKTEAVLSRTRIVVDESSSHLTDWATFQHLFRSSSTTFYTI