; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018980 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018980
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold12:24451596..24453840
RNA-Seq ExpressionSpg018980
SyntenySpg018980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]5.1e-1128.62Show/hide
Query:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSV---------KNFGSSHASSSKQV--F
        E+S ++  D+HWKR KRP K      +SI       + PD   T  P       E+  +S+ S T   A A S+         +  G +   ++ ++  F
Subjt:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSV---------KNFGSSHASSSKQV--F

Query:  YVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLE-------------------HLEQ---------ESHKLEAKKLHLE--------------KALS
         VD+LIS  RR+ A+++  S++QKI+ T FE V+SL+                    L++         E+H      + L+              K L 
Subjt:  YVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLE-------------------HLEQ---------ESHKLEAKKLHLE--------------KALS

Query:  I-EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST
        + E+R+++E   +Q++LAR       L  K A+LEAKL     +   LS  +S+ E +L  ++  +S+  EEI  ++CA  +  +D + L+ +RE LE+T
Subjt:  I-EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST

Query:  RDELKALQWNP
         +ELK L+W P
Subjt:  RDELKALQWNP

KAA0047641.1 uncharacterized protein E6C27_scaffold115G001240 [Cucumis melo var. makuwa]4.0e-0829.67Show/hide
Query:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSVKNFGSSHASSSKQVFYVDDLISTFRR
        E+SQ++  D+HWKR KRP+K S   +K      +  Q  D T  +    D V + E   + +S  SP+  ++S          +SK    +D+L+   RR
Subjt:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSVKNFGSSHASSSKQVFYVDDLISTFRR

Query:  QAALSIWTSIQQKIVRTSFEDVASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSE
        + A+++W S++QKI+ T FE    L                       E+R++EE   +Q +L R       L  K A+LEAKL     +    S+ + E
Subjt:  QAALSIWTSIQQKIVRTSFEDVASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSE

Query:  KEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST
         +  L  ++  +S+  EEI  +ECA  V  +D + L  +RE LE T
Subjt:  KEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST

OMO73364.1 hypothetical protein CCACVL1_17307 [Corchorus capsularis]3.1e-0830.56Show/hide
Query:  FYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDV-----------ASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDALQKQLARSVAEVADLKTKV
        F  D +I   + + AL IW SIQ KI RT F+ V           A++E ++ ++ KL+     LE+++S E +     D L  +L     E++ L+ K 
Subjt:  FYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDV-----------ASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDALQKQLARSVAEVADLKTKV

Query:  AELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQWNP
        A+LE              +S+ E +K L   +  VS IREE++  E    +S +D + L ++ ++L S+R++LK L+W P
Subjt:  AELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQWNP

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]1.0e-1128.94Show/hide
Query:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSV---------KNFGSSHASSSKQV--F
        E+S ++  D+HWKR KRP K      +SI       + PD   T  P       E+  +S+ S T   A A S+         +  G +   ++ ++  F
Subjt:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSV---------KNFGSSHASSSKQV--F

Query:  YVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLE-------------------HLEQ---------ESHKLEAKKLHLE--------------KALS
         VD+LIS  RR+ A+++  S++QKI+RT FE V+SL+                    L++         E+H      + L+              K L 
Subjt:  YVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLE-------------------HLEQ---------ESHKLEAKKLHLE--------------KALS

Query:  I-EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST
        + E+R+++E   +Q++LAR       L  K A+LEAKL     +   LS  +S+ E +L  ++  +S+  EEI  ++CA  +  +D + L  +RE LE+T
Subjt:  I-EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST

Query:  RDELKALQWNP
         +ELK L+W P
Subjt:  RDELKALQWNP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]5.2e-0853.7Show/hide
Query:  QVDHSHVPISSWTSFWF-KGEQRYAKPPQQRPKKTSRPSTTHNPDGTNIKRHEW
        ++DHS + +S W SFW  + E +Y+KPP ++PKKTSRP +THNPDG  I+R +W
Subjt:  QVDHSHVPISSWTSFWF-KGEQRYAKPPQQRPKKTSRPSTTHNPDGTNIKRHEW

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.3e-0624.23Show/hide
Query:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQ-----------------------------------------------TPDDTETLPPSND---
        E+SQ+S  D+HWKR K+P K S   ++S     +A+Q                                                 D  E++P   D   
Subjt:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQ-----------------------------------------------TPDDTETLPPSND---

Query:  ----RVQEEEECSSDQSLTSPDAFASSVKNFGSSHASSSKQV--FYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLEHLEQESHKL---------
                +E   ++     P       +    +   +  ++  F  D LIS  RRQAA+++W +++QKI+RT FE ++S   LE E HK+         
Subjt:  ----RVQEEEECSSDQSLTSPDAFASSVKNFGSSHASSSKQV--FYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLEHLEQESHKL---------

Query:  ------------------------------EAKKLHLEKALSI-------EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSV
                                        K + L +A          E+R++ E +  +++L R       L  K A+LEAKL    A+   LS  +
Subjt:  ------------------------------EAKKLHLEKALSI-------EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSV

Query:  SEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQWNP
         + + +L  ++  +S+  EEI  +ECA  V   D + L+ +RE LEST +ELK  +W P
Subjt:  SEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQWNP

TrEMBL top hitse value%identityAlignment
A0A1R3HSY5 Uncharacterized protein1.5e-0830.56Show/hide
Query:  FYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDV-----------ASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDALQKQLARSVAEVADLKTKV
        F  D +I   + + AL IW SIQ KI RT F+ V           A++E ++ ++ KL+     LE+++S E +     D L  +L     E++ L+ K 
Subjt:  FYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDV-----------ASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDALQKQLARSVAEVADLKTKV

Query:  AELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQWNP
        A+LE              +S+ E +K L   +  VS IREE++  E    +S +D + L ++ ++L S+R++LK L+W P
Subjt:  AELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQWNP

A0A2N9G5U8 PMD domain-containing protein6.5e-1234.24Show/hide
Query:  SSVKNFGSSHASSSKQVFYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDALQKQLARSVAEVA
        S V++ G   A S+      +D+IS   R  A  +   + +KI++T F+ VASL+   +   + +A++ +    L++E   +E +D+     +R+ AE++
Subjt:  SSVKNFGSSHASSSKQVFYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDALQKQLARSVAEVA

Query:  DLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQW
         + +K  EL  +L     +   L NS+S  E+ L   + AVSRI+EEIS+IE   T+ TSD   L  +RELLE++R+ELK L W
Subjt:  DLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQW

A0A2N9GHR5 Uncharacterized protein1.5e-0833.84Show/hide
Query:  SSVKNFGSSHASSSKQVFYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDAL---------QKQ
        S V++ G   A S+      +D+IS   R  A  +   + +KI++T F+ VAS   L++E  K+    +H  +  +I D  + +   L         QK 
Subjt:  SSVKNFGSSHASSSKQVFYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLEHLEQESHKLEAKKLHLEKALSIEDRVVEEKDAL---------QKQ

Query:  L-----ARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQW
        L      R+ AE++ + +K  EL  +L     +   L NS+S  E+ L   + AVSRI+EEIS+IE   T+ TSD   L  +RELLE++R+ELK L W
Subjt:  L-----ARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQW

A0A5A7SJ85 Uncharacterized protein2.5e-1128.62Show/hide
Query:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSV---------KNFGSSHASSSKQV--F
        E+S ++  D+HWKR KRP K      +SI       + PD   T  P       E+  +S+ S T   A A S+         +  G +   ++ ++  F
Subjt:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSV---------KNFGSSHASSSKQV--F

Query:  YVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLE-------------------HLEQ---------ESHKLEAKKLHLE--------------KALS
         VD+LIS  RR+ A+++  S++QKI+ T FE V+SL+                    L++         E+H      + L+              K L 
Subjt:  YVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLE-------------------HLEQ---------ESHKLEAKKLHLE--------------KALS

Query:  I-EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST
        + E+R+++E   +Q++LAR       L  K A+LEAKL     +   LS  +S+ E +L  ++  +S+  EEI  ++CA  +  +D + L+ +RE LE+T
Subjt:  I-EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST

Query:  RDELKALQWNP
         +ELK L+W P
Subjt:  RDELKALQWNP

A0A5D3C453 Uncharacterized protein4.9e-1228.94Show/hide
Query:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSV---------KNFGSSHASSSKQV--F
        E+S ++  D+HWKR KRP K      +SI       + PD   T  P       E+  +S+ S T   A A S+         +  G +   ++ ++  F
Subjt:  EESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDTETLPPSNDRVQEEEECSSDQSLTSPDAFASSV---------KNFGSSHASSSKQV--F

Query:  YVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLE-------------------HLEQ---------ESHKLEAKKLHLE--------------KALS
         VD+LIS  RR+ A+++  S++QKI+RT FE V+SL+                    L++         E+H      + L+              K L 
Subjt:  YVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLE-------------------HLEQ---------ESHKLEAKKLHLE--------------KALS

Query:  I-EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST
        + E+R+++E   +Q++LAR       L  K A+LEAKL     +   LS  +S+ E +L  ++  +S+  EEI  ++CA  +  +D + L  +RE LE+T
Subjt:  I-EDRVVEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLEST

Query:  RDELKALQWNP
         +ELK L+W P
Subjt:  RDELKALQWNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCTACTTGCTTAGCGCTTCAAGTTGACCATTCCCATGTTCCAATCAGCTCCTGGACTTCCTTTTGGTTCAAAGGTGAACAGAGATACGCAAAGCCTCCTCAACA
GAGACCCAAGAAGACCTCTCGCCCTAGCACGACTCATAACCCAGACGGCACAAATATCAAGCGTCACGAGTGGCCTCTAGATGATTCAACCGAAGAAGAGAGTCAAAACA
GCACTGGAGATCAACACTGGAAAAGAGCCAAAAGACCCAGGAAAGATTCTGATCTCGCTGACAAGTCCATCAAGAGTGCCTCTAATGCTTCACAGACTCCTGACGACACT
GAGACTTTGCCTCCTTCAAATGATCGTGTTCAAGAGGAGGAAGAATGTTCGAGCGATCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTTCTGTGAAGAACTTCGGAAG
CTCTCATGCATCCTCGAGCAAACAAGTCTTCTATGTTGATGATTTAATTTCCACCTTTCGACGGCAAGCTGCTTTATCCATATGGACAAGCATACAACAGAAGATCGTAC
GCACTTCTTTTGAAGATGTTGCTAGCCTTGAGCACCTTGAGCAAGAATCTCACAAGTTGGAGGCGAAGAAACTCCATTTAGAGAAGGCTTTGTCTATCGAAGATCGTGTT
GTTGAGGAGAAAGATGCACTTCAGAAACAACTTGCTCGCTCTGTCGCAGAGGTTGCAGATCTAAAGACCAAGGTTGCAGAACTTGAGGCCAAGTTAACAGCTGCAGAGGC
CAAGGTAGAAAGCCTTTCCAATTCGGTTTCTGAAAAGGAAAAGGACTTAGCTCATGAAAAACTTGCAGTTTCAAGAATACGTGAGGAAATTAGTGACATCGAGTGTGCCT
CCACCGTTAGCACTTCAGACGTTCGAACCCTAGCGATAATTCGCGAACTTTTGGAGAGTACTCGTGACGAGCTTAAAGCCCTTCAATGGAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTCTACTTGCTTAGCGCTTCAAGTTGACCATTCCCATGTTCCAATCAGCTCCTGGACTTCCTTTTGGTTCAAAGGTGAACAGAGATACGCAAAGCCTCCTCAACA
GAGACCCAAGAAGACCTCTCGCCCTAGCACGACTCATAACCCAGACGGCACAAATATCAAGCGTCACGAGTGGCCTCTAGATGATTCAACCGAAGAAGAGAGTCAAAACA
GCACTGGAGATCAACACTGGAAAAGAGCCAAAAGACCCAGGAAAGATTCTGATCTCGCTGACAAGTCCATCAAGAGTGCCTCTAATGCTTCACAGACTCCTGACGACACT
GAGACTTTGCCTCCTTCAAATGATCGTGTTCAAGAGGAGGAAGAATGTTCGAGCGATCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTTCTGTGAAGAACTTCGGAAG
CTCTCATGCATCCTCGAGCAAACAAGTCTTCTATGTTGATGATTTAATTTCCACCTTTCGACGGCAAGCTGCTTTATCCATATGGACAAGCATACAACAGAAGATCGTAC
GCACTTCTTTTGAAGATGTTGCTAGCCTTGAGCACCTTGAGCAAGAATCTCACAAGTTGGAGGCGAAGAAACTCCATTTAGAGAAGGCTTTGTCTATCGAAGATCGTGTT
GTTGAGGAGAAAGATGCACTTCAGAAACAACTTGCTCGCTCTGTCGCAGAGGTTGCAGATCTAAAGACCAAGGTTGCAGAACTTGAGGCCAAGTTAACAGCTGCAGAGGC
CAAGGTAGAAAGCCTTTCCAATTCGGTTTCTGAAAAGGAAAAGGACTTAGCTCATGAAAAACTTGCAGTTTCAAGAATACGTGAGGAAATTAGTGACATCGAGTGTGCCT
CCACCGTTAGCACTTCAGACGTTCGAACCCTAGCGATAATTCGCGAACTTTTGGAGAGTACTCGTGACGAGCTTAAAGCCCTTCAATGGAATCCTTAA
Protein sequenceShow/hide protein sequence
MHSTCLALQVDHSHVPISSWTSFWFKGEQRYAKPPQQRPKKTSRPSTTHNPDGTNIKRHEWPLDDSTEEESQNSTGDQHWKRAKRPRKDSDLADKSIKSASNASQTPDDT
ETLPPSNDRVQEEEECSSDQSLTSPDAFASSVKNFGSSHASSSKQVFYVDDLISTFRRQAALSIWTSIQQKIVRTSFEDVASLEHLEQESHKLEAKKLHLEKALSIEDRV
VEEKDALQKQLARSVAEVADLKTKVAELEAKLTAAEAKVESLSNSVSEKEKDLAHEKLAVSRIREEISDIECASTVSTSDVRTLAIIRELLESTRDELKALQWNP