; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019004 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019004
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold12:24224907..24225951
RNA-Seq ExpressionSpg019004
SyntenySpg019004
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]3.8e-0924.2Show/hide
Query:  PILSPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQKRAIDVD------------------------------
        P++SPL D LEG+ E  ++ESLT P+  D   + +  SK   N+ A     PS   E  ++ +      D                              
Subjt:  PILSPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQKRAIDVD------------------------------

Query:  -----------PEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFN----------------------------KKALLAENHLLKKQDTLEQQLARS
                   PE S +    ++S+  ++TA+ +W++I  KI++  F                             K+AL     L      ++++ A  
Subjt:  -----------PEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFN----------------------------KKALLAENHLLKKQDTLEQQLARS

Query:  YEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ
          + KELE +L +   + E+LS   CE  +A++QQ LEV K+++E+  +E  P +T+E  ++L +VR ++E+ REE +  +
Subjt:  YEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ

KAA0047641.1 uncharacterized protein E6C27_scaffold115G001240 [Cucumis melo var. makuwa]9.9e-1036.29Show/hide
Query:  NTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLAENHLLKKQDTLEQQLARSYEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIA
        + L+ D RR+TAI LW+++ +KI+   F +   L EN +L++  T++ +L R   K  +LEAKL+    +    S+ + E +  L+Q++ E++K  EEI 
Subjt:  NTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLAENHLLKKQDTLEQQLARSYEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIA

Query:  NIECAPLMTDEDAKSLDTVRNNLE
         +ECAP++ D D K L  +R +LE
Subjt:  NIECAPLMTDEDAKSLDTVRNNLE

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]6.4e-0927.86Show/hide
Query:  ASQFPSPPPILSPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQK-------RAIDV-----DPEASHYCANT
        A + P  PP LSPL D LEG+ E  +++SLT P+  D+  + +  SK L N+ A     PS   E  ++ +        RA+        PE S +    
Subjt:  ASQFPSPPPILSPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQK-------RAIDV-----DPEASHYCANT

Query:  LISDHRRQTAIALWDNIHRKIVRIAFNKKALLAE------------------------NHLLKKQDTLEQQLAR------SYEKIKELEAKLETAIAKHE
        ++S+  ++TA+ +W++I  KI+R  F     L                          N  LK+ D      +       S +K  +L  K  +AI +  
Subjt:  LISDHRRQTAIALWDNIHRKIVRIAFNKKALLAE------------------------NHLLKKQDTLEQQLAR------SYEKIKELEAKLETAIAKHE

Query:  KLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ
         L   +    KA++QQ LEV K+++E+  +E  P +T+E  ++L TVR ++E+ REE +  +
Subjt:  KLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ

KAA0066958.1 hypothetical protein E6C27_scaffold550G00980 [Cucumis melo var. makuwa]2.4e-0829.44Show/hide
Query:  DPEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLAE------------------------NHLLKKQDTLEQQLARSYEKIKELEAKLETA
        +PE S +    ++S+  ++TA+ +W++I  KI+R  F     L                          N  LK++ T +  L R     KELE +L + 
Subjt:  DPEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLAE------------------------NHLLKKQDTLEQQLARSYEKIKELEAKLETA

Query:  IAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELR--KLQVDDLNLIPLLL
         A+ E+LS   CE  +A++QQ LE+ K+++E+  +E  P +T+E  ++L TVR ++E+ REE +  K ++  + + PL L
Subjt:  IAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELR--KLQVDDLNLIPLLL

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]6.9e-1128.63Show/hide
Query:  EESLTS-PNVFD--NTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQKRAIDVDPEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLA--
        E++L S PN+ D    + +  +SK       +S  PP       +      I V  E SH+CA++LISD RRQ AI LW+N+ +KI+R  F + + L   
Subjt:  EESLTS-PNVFD--NTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQKRAIDVDPEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLA--

Query:  ---------------------------------------------------------------ENHLLKKQDTLEQQLARSYEKIKELEAKLETAIAKHE
                                                                       EN +L + +T +++L R   K  +LEAKL+   A+  
Subjt:  ---------------------------------------------------------------ENHLLKKQDTLEQQLARSYEKIKELEAKLETAIAKHE

Query:  KLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ
        KLS  + + +  L+Q++ E++K  EEI  +ECAP++ D DAK L T+R +LES  EEL+  +
Subjt:  KLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.8e-0924.2Show/hide
Query:  PILSPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQKRAIDVD------------------------------
        P++SPL D LEG+ E  ++ESLT P+  D   + +  SK   N+ A     PS   E  ++ +      D                              
Subjt:  PILSPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQKRAIDVD------------------------------

Query:  -----------PEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFN----------------------------KKALLAENHLLKKQDTLEQQLARS
                   PE S +    ++S+  ++TA+ +W++I  KI++  F                             K+AL     L      ++++ A  
Subjt:  -----------PEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFN----------------------------KKALLAENHLLKKQDTLEQQLARS

Query:  YEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ
          + KELE +L +   + E+LS   CE  +A++QQ LEV K+++E+  +E  P +T+E  ++L +VR ++E+ REE +  +
Subjt:  YEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ

A0A5A7U231 Uncharacterized protein4.8e-1036.29Show/hide
Query:  NTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLAENHLLKKQDTLEQQLARSYEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIA
        + L+ D RR+TAI LW+++ +KI+   F +   L EN +L++  T++ +L R   K  +LEAKL+    +    S+ + E +  L+Q++ E++K  EEI 
Subjt:  NTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLAENHLLKKQDTLEQQLARSYEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIA

Query:  NIECAPLMTDEDAKSLDTVRNNLE
         +ECAP++ D D K L  +R +LE
Subjt:  NIECAPLMTDEDAKSLDTVRNNLE

A0A5A7U8L3 PMD domain-containing protein3.1e-0927.86Show/hide
Query:  ASQFPSPPPILSPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQK-------RAIDV-----DPEASHYCANT
        A + P  PP LSPL D LEG+ E  +++SLT P+  D+  + +  SK L N+ A     PS   E  ++ +        RA+        PE S +    
Subjt:  ASQFPSPPPILSPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQK-------RAIDV-----DPEASHYCANT

Query:  LISDHRRQTAIALWDNIHRKIVRIAFNKKALLAE------------------------NHLLKKQDTLEQQLAR------SYEKIKELEAKLETAIAKHE
        ++S+  ++TA+ +W++I  KI+R  F     L                          N  LK+ D      +       S +K  +L  K  +AI +  
Subjt:  LISDHRRQTAIALWDNIHRKIVRIAFNKKALLAE------------------------NHLLKKQDTLEQQLAR------SYEKIKELEAKLETAIAKHE

Query:  KLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ
         L   +    KA++QQ LEV K+++E+  +E  P +T+E  ++L TVR ++E+ REE +  +
Subjt:  KLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELRKLQ

A0A5A7UC86 Uncharacterized protein1.2e-0830.36Show/hide
Query:  SPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSN-----------------EKAMSPNPPSKTSESHQQNQKRAIDVDPEASHYCANTLIS-DH
        SPL D LEG+ E  ++ESLT P+V D+T+  +   K                     +K  S + P K  ES     KR    +P+ S +    L+S D 
Subjt:  SPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSN-----------------EKAMSPNPPSKTSESHQQNQKRAIDVDPEASHYCANTLIS-DH

Query:  RRQTAIALWDNIHRKIVRIAFNKKALLAENHLLKKQDTLEQQLARSYEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPL
         RQ        +  K   I   K+ L   + L      ++ +  +     KELE +L++   K E+LS   CE  +A++Q +LEV KV++E+  +E  P 
Subjt:  RRQTAIALWDNIHRKIVRIAFNKKALLAENHLLKKQDTLEQQLARSYEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPL

Query:  MTDEDAKSLDTVRNNLESLREELR
        +T E A++L  VR ++E  REE +
Subjt:  MTDEDAKSLDTVRNNLESLREELR

A0A5D3CS52 Uncharacterized protein1.2e-0829.44Show/hide
Query:  DPEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLAE------------------------NHLLKKQDTLEQQLARSYEKIKELEAKLETA
        +PE S +    ++S+  ++TA+ +W++I  KI+R  F     L                          N  LK++ T +  L R     KELE +L + 
Subjt:  DPEASHYCANTLISDHRRQTAIALWDNIHRKIVRIAFNKKALLAE------------------------NHLLKKQDTLEQQLARSYEKIKELEAKLETA

Query:  IAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELR--KLQVDDLNLIPLLL
         A+ E+LS   CE  +A++QQ LE+ K+++E+  +E  P +T+E  ++L TVR ++E+ REE +  K ++  + + PL L
Subjt:  IAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTVRNNLESLREELR--KLQVDDLNLIPLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCACGAATGTAGACAACTCTTTTGATGAAGTTCCAAGGGCTTCTCAGTTTCCTAGTCCTCCTCCAATTTTGTCACCTCTGAAAGATCCCCTTGAAGGTGTGGA
GGAGCAACGCAACGAGGAATCATTAACAAGTCCAAATGTGTTTGACAATACTATGAAGCATATGAGTGACTCCAAGGCATTGTCCAACGAGAAAGCCATGAGCCCTAATC
CTCCTTCTAAGACTTCTGAAAGTCATCAGCAAAATCAAAAGAGAGCAATCGATGTGGATCCTGAAGCTTCCCATTATTGTGCCAACACATTGATCTCTGACCATCGACGA
CAAACAGCCATAGCTCTGTGGGACAACATACATCGAAAAATTGTACGTATTGCTTTTAACAAGAAAGCACTACTTGCCGAAAACCATTTGCTTAAGAAGCAGGACACACT
CGAACAACAACTAGCACGATCATACGAGAAGATAAAGGAACTAGAGGCCAAACTTGAGACAGCAATAGCCAAGCATGAGAAGCTTTCCAATTCGGTTTGTGAGGGAGAGA
AAGCTTTGGAGCAACAGAGACTCGAAGTTACCAAGGTCCGTGAAGAGATTGCCAATATTGAATGTGCCCCTCTCATGACTGATGAAGATGCTAAGTCTTTGGACACAGTT
CGTAACAACTTAGAGAGTCTACGTGAAGAGCTGAGGAAACTTCAAGTGGATGATTTAAATTTGATTCCCCTACTGCTTTCTAGATTAGATGCAAAGACCCCTTTTTTTTA
TTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCACGAATGTAGACAACTCTTTTGATGAAGTTCCAAGGGCTTCTCAGTTTCCTAGTCCTCCTCCAATTTTGTCACCTCTGAAAGATCCCCTTGAAGGTGTGGA
GGAGCAACGCAACGAGGAATCATTAACAAGTCCAAATGTGTTTGACAATACTATGAAGCATATGAGTGACTCCAAGGCATTGTCCAACGAGAAAGCCATGAGCCCTAATC
CTCCTTCTAAGACTTCTGAAAGTCATCAGCAAAATCAAAAGAGAGCAATCGATGTGGATCCTGAAGCTTCCCATTATTGTGCCAACACATTGATCTCTGACCATCGACGA
CAAACAGCCATAGCTCTGTGGGACAACATACATCGAAAAATTGTACGTATTGCTTTTAACAAGAAAGCACTACTTGCCGAAAACCATTTGCTTAAGAAGCAGGACACACT
CGAACAACAACTAGCACGATCATACGAGAAGATAAAGGAACTAGAGGCCAAACTTGAGACAGCAATAGCCAAGCATGAGAAGCTTTCCAATTCGGTTTGTGAGGGAGAGA
AAGCTTTGGAGCAACAGAGACTCGAAGTTACCAAGGTCCGTGAAGAGATTGCCAATATTGAATGTGCCCCTCTCATGACTGATGAAGATGCTAAGTCTTTGGACACAGTT
CGTAACAACTTAGAGAGTCTACGTGAAGAGCTGAGGAAACTTCAAGTGGATGATTTAAATTTGATTCCCCTACTGCTTTCTAGATTAGATGCAAAGACCCCTTTTTTTTA
TTGTTGA
Protein sequenceShow/hide protein sequence
MSSTNVDNSFDEVPRASQFPSPPPILSPLKDPLEGVEEQRNEESLTSPNVFDNTMKHMSDSKALSNEKAMSPNPPSKTSESHQQNQKRAIDVDPEASHYCANTLISDHRR
QTAIALWDNIHRKIVRIAFNKKALLAENHLLKKQDTLEQQLARSYEKIKELEAKLETAIAKHEKLSNSVCEGEKALEQQRLEVTKVREEIANIECAPLMTDEDAKSLDTV
RNNLESLREELRKLQVDDLNLIPLLLSRLDAKTPFFYC