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Spg019046 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019046
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:42741093..42743111
RNA-Seq ExpressionSpg019046
SyntenySpg019046
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041324.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.5e-2056.48Show/hide
Query:  VVCVRGISGQIGWESRFHFFRPRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQ
        VV  RG+S  I  ES  H  RPR                        GYI LLTLSVLRDN+ V+SV R P  KDDGSAGR PLHRRTSKRWLYWACPTQ
Subjt:  VVCVRGISGQIGWESRFHFFRPRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQ

Query:  RRSVMLVE
        R  VMLV+
Subjt:  RRSVMLVE

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]3.0e-3762.25Show/hide
Query:  PRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIEL
        PRGNRSSLQTG+L KT              L TLSVLRDNDAV+S G   YDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL
Subjt:  PRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIEL

Query:  LVPDTLPTSAESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGPGG
         VPDTLPTSAESS S+S S         +  DDV WLH +FR K  GGPGG
Subjt:  LVPDTLPTSAESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGPGG

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]3.0e-3762.25Show/hide
Query:  PRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIEL
        PRGNRSSLQTG+L KT              L TLSVLRDNDAV+S G   YDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL
Subjt:  PRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIEL

Query:  LVPDTLPTSAESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGPGG
         VPDTLPTSAESS S+S S         +  DDV WLH +FR K  GGPGG
Subjt:  LVPDTLPTSAESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGPGG

TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]1.8e-2157.41Show/hide
Query:  VVCVRGISGQIGWESRFHFFRPRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQ
        VV  RG+S  I  ES  H  R                     YRVHT YI LLTLSVLRDN+ +MSV R P  KDDGSAGR PLHRRTSKRWLYWAC TQ
Subjt:  VVCVRGISGQIGWESRFHFFRPRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQ

Query:  RRSVMLVE
        R  VMLV+
Subjt:  RRSVMLVE

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]3.7e-1944.25Show/hide
Query:  PRGNRSSLQTGKLAKTPEGIWYRVH------------TGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI
        PRGNRSSLQTG+L K    I Y                   PL TLSVLRDNDAV+SVG+  YDKDDG  G    H       +             +EI
Subjt:  PRGNRSSLQTGKLAKTPEGIWYRVH------------TGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI

Query:  ELLVPDTLPTSAESSRSSSS-------------STFQEGQRVSLE--------EDDVRWLHAIFRTKLAGGPGG
        ELLVPDTLPTSAESS S+SS             S  +   R+  E        E+DV WLHA+FR K+AGG GG
Subjt:  ELLVPDTLPTSAESSRSSSS-------------STFQEGQRVSLE--------EDDVRWLHAIFRTKLAGGPGG

TrEMBL top hitse value%identityAlignment
A0A5A7TCY8 DNA/RNA polymerases superfamily protein7.2e-2156.48Show/hide
Query:  VVCVRGISGQIGWESRFHFFRPRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQ
        VV  RG+S  I  ES  H  RPR                        GYI LLTLSVLRDN+ V+SV R P  KDDGSAGR PLHRRTSKRWLYWACPTQ
Subjt:  VVCVRGISGQIGWESRFHFFRPRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQ

Query:  RRSVMLVE
        R  VMLV+
Subjt:  RRSVMLVE

A0A5A7VGQ5 Uncharacterized protein1.4e-3762.25Show/hide
Query:  PRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIEL
        PRGNRSSLQTG+L KT              L TLSVLRDNDAV+S G   YDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL
Subjt:  PRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIEL

Query:  LVPDTLPTSAESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGPGG
         VPDTLPTSAESS S+S S         +  DDV WLH +FR K  GGPGG
Subjt:  LVPDTLPTSAESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGPGG

A0A5D3BG85 Uncharacterized protein1.4e-3762.25Show/hide
Query:  PRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIEL
        PRGNRSSLQTG+L KT              L TLSVLRDNDAV+S G   YDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL
Subjt:  PRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIEL

Query:  LVPDTLPTSAESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGPGG
         VPDTLPTSAESS S+S S         +  DDV WLH +FR K  GGPGG
Subjt:  LVPDTLPTSAESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGPGG

A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein8.5e-2257.41Show/hide
Query:  VVCVRGISGQIGWESRFHFFRPRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQ
        VV  RG+S  I  ES  H  R                     YRVHT YI LLTLSVLRDN+ +MSV R P  KDDGSAGR PLHRRTSKRWLYWAC TQ
Subjt:  VVCVRGISGQIGWESRFHFFRPRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQ

Query:  RRSVMLVE
        R  VMLV+
Subjt:  RRSVMLVE

A0A5D3CAC6 Uncharacterized protein1.8e-1944.25Show/hide
Query:  PRGNRSSLQTGKLAKTPEGIWYRVH------------TGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI
        PRGNRSSLQTG+L K    I Y                   PL TLSVLRDNDAV+SVG+  YDKDDG  G    H       +             +EI
Subjt:  PRGNRSSLQTGKLAKTPEGIWYRVH------------TGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEI

Query:  ELLVPDTLPTSAESSRSSSS-------------STFQEGQRVSLE--------EDDVRWLHAIFRTKLAGGPGG
        ELLVPDTLPTSAESS S+SS             S  +   R+  E        E+DV WLHA+FR K+AGG GG
Subjt:  ELLVPDTLPTSAESSRSSSS-------------STFQEGQRVSLE--------EDDVRWLHAIFRTKLAGGPGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGAAGAAGAAGGTTTCCAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATCGGTTGGGAATCTCGTTTTCA
TTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCGGGAAACTAGCTAAGACACCCGAGGGTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGT
TGAGTGTACTCCGTGACAACGATGCTGTCATGAGTGTTGGGCGGGCCCCCTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGT
TGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTC
CAGTTCAACATTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGGG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGAAGAAGAAGGTTTCCAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATCGGTTGGGAATCTCGTTTTCA
TTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCGGGAAACTAGCTAAGACACCCGAGGGTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGT
TGAGTGTACTCCGTGACAACGATGCTGTCATGAGTGTTGGGCGGGCCCCCTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGT
TGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTC
CAGTTCAACATTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGGG
Protein sequenceShow/hide protein sequence
MKEKKKVSKIKGSREPRICVVCVRGISGQIGWESRFHFFRPRGNRSSLQTGKLAKTPEGIWYRVHTGYIPLLTLSVLRDNDAVMSVGRAPYDKDDGSAGRAPLHRRTSKR
WLYWACPTQRRSVMLVEIELLVPDTLPTSAESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGPGG