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Spg019053 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019053
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold1:47813513..47816140
RNA-Seq ExpressionSpg019053
SyntenySpg019053
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025357.1 hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa]5.2e-1161.64Show/hide
Query:  LFGLSYIGRTKRPRGNRSSLQTGKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVEL
        LFGLSY   TKRP+GNR SLQTG+L KT                 VEIELPVPDTLPTSAES RS+S+TW+EL
Subjt:  LFGLSYIGRTKRPRGNRSSLQTGKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVEL

KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]3.2e-1364.47Show/hide
Query:  LFGLSYIGRTKRPRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVELSHATTYQQ-----TTQVVSG
        LF LSY   TKRPRGNR SLQTGKL KTVEIELP+PDTLPT AES  S+SSTW+EL   + + +     T QV+SG
Subjt:  LFGLSYIGRTKRPRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVELSHATTYQQ-----TTQVVSG

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.0e-1255.91Show/hide
Query:  LFGLSYIGRTKRPRGNRSSLQTGKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELSHATT-----YQQTTQVVSG
        LFGL Y   TKRPRGNR+SLQTG+L KT                 VEIELPVPDTLPTSAESS S+SSTW+EL+         Y  T QV+SG
Subjt:  LFGLSYIGRTKRPRGNRSSLQTGKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELSHATT-----YQQTTQVVSG

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]2.0e-1084.09Show/hide
Query:  PRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVEL
        PRGNR +L TGKL KTVEIELPVPDTLPTSAESS+S+SSTW+EL
Subjt:  PRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVEL

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]4.4e-1067.19Show/hide
Query:  PRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVELSHATTY-----QQTTQVVSG
        PRGNR S QTGKL KTVEIELPVPDTLPTSAESS S+SSTW+EL   + +       T QV+SG
Subjt:  PRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVELSHATTY-----QQTTQVVSG

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein1.6e-1364.47Show/hide
Query:  LFGLSYIGRTKRPRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVELSHATTYQQ-----TTQVVSG
        LF LSY   TKRPRGNR SLQTGKL KTVEIELP+PDTLPT AES  S+SSTW+EL   + + +     T QV+SG
Subjt:  LFGLSYIGRTKRPRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVELSHATTYQQ-----TTQVVSG

A0A5A7U9X4 DNA/RNA polymerases superfamily protein3.9e-1255.91Show/hide
Query:  LFGLSYIGRTKRPRGNRSSLQTGKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELSHATT-----YQQTTQVVSG
        LFGL Y   TKRPRGNR+SLQTG+L KT                 VEIELPVPDTLPTSAESS S+SSTW+EL+         Y  T QV+SG
Subjt:  LFGLSYIGRTKRPRGNRSSLQTGKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELSHATT-----YQQTTQVVSG

A0A5A7UAH6 CCHC-type domain-containing protein9.5e-1184.09Show/hide
Query:  PRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVEL
        PRGNR +L TGKL KTVEIELPVPDTLPTSAESS+S+SSTW+EL
Subjt:  PRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVEL

A0A5D3BET3 Uncharacterized protein2.1e-1067.19Show/hide
Query:  PRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVELSHATTY-----QQTTQVVSG
        PRGNR S QTGKL KTVEIELPVPDTLPTSAESS S+SSTW+EL   + +       T QV+SG
Subjt:  PRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVELSHATTY-----QQTTQVVSG

A0A5D3DIM8 Uncharacterized protein2.5e-1161.64Show/hide
Query:  LFGLSYIGRTKRPRGNRSSLQTGKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVEL
        LFGLSY   TKRP+GNR SLQTG+L KT                 VEIELPVPDTLPTSAES RS+S+TW+EL
Subjt:  LFGLSYIGRTKRPRGNRSSLQTGKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATCTCTGGTTTTTTATTCGGGTTGAGCTACATAGGAAGAACTAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCGGGAAACTAGCTAAGACAGTAGAAAT
CGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGAGTCATGCCACCACGTACCAGCAGACGACGCAGG
TAGTATCAGGACGGGATGCAGGATCCTACCAAGAGTCAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATCTCTGGTTTTTTATTCGGGTTGAGCTACATAGGAAGAACTAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCGGGAAACTAGCTAAGACAGTAGAAAT
CGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGAGTCATGCCACCACGTACCAGCAGACGACGCAGG
TAGTATCAGGACGGGATGCAGGATCCTACCAAGAGTCAGTCTGA
Protein sequenceShow/hide protein sequence
MPISGFLFGLSYIGRTKRPRGNRSSLQTGKLAKTVEIELPVPDTLPTSAESSRSSSSTWVELSHATTYQQTTQVVSGRDAGSYQESV