; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019096 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019096
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold1:43522261..43523777
RNA-Seq ExpressionSpg019096
SyntenySpg019096
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]1.3e-1729.83Show/hide
Query:  PRLPYNRFVNV---LARAKYIEMLK-RDFLFERG-------FGNDLPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTN-IDEEEGFQAIDRGVAVDWS
        PR    R  N+   L + KY+  ++ ++F  +RG       FG+ +P +L   I      Q C  P  A   VV EFY N +  E   +   R V V +S
Subjt:  PRLPYNRFVNV---LARAKYIEMLK-RDFLFERG-------FGNDLPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTN-IDEEEGFQAIDRGVAVDWS

Query:  PLNAAVREVG----IEGAQWRFSKTEKR------------TFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHS
              R++     ++   + FSK   +             F+   LK +      F++  LLPT+HDSTVSR+R+ +++ I++   I+VGK+I+ EI  
Subjt:  PLNAAVREVG----IEGAQWRFSKTEKR------------TFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHS

Query:  SWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDI-PNLARLQRTQEARQSGLVCDIHQMQEQLQMHSNRMEFAEWQFQTFWNYVTRRD
           +  GKLFFS  IT  C+   VPM  D+  +  KG++   P+ A  + T     +    D   M E+L  H    +    + QT WNY   RD
Subjt:  SWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDI-PNLARLQRTQEARQSGLVCDIHQMQEQLQMHSNRMEFAEWQFQTFWNYVTRRD

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.6e-2032.41Show/hide
Query:  RFVNVLARAKYIEMLK-RDFLFERGFGND-------LPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS----------
        +F    A  +Y   ++ R    E+GF  D       LP F+   I  H   QFC  PE     +V EFY N+ +        RGV V WS          
Subjt:  RFVNVLARAKYIEMLK-RDFLFERGFGND-------LPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS----------

Query:  -----------------PLNAAVREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIH
                          L   +  V + GA+W  S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+  +L   SI+VG++I SEI 
Subjt:  -----------------PLNAAVREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIH

Query:  SSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDIPNLARLQRTQE
        +   +K G LFF + IT LC+    P   ++  L + G ID   +AR+  TQE
Subjt:  SSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDIPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.9e-2130.74Show/hide
Query:  FLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAAVREVGIEGAQWRFSKTE
        F+   I  H   QFC  PE     +V EFY N+ + E      RGV V WS                            L   +  V   GA+W  S   
Subjt:  FLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAAVREVGIEGAQWRFSKTE

Query:  KRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGI
          T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+  +L   SI+VG++I SEI +   +K G LFF + IT LC+    P   ++  L + G 
Subjt:  KRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGI

Query:  IDIPNLARL------QRTQEARQSGLVC--------DIHQMQEQLQMHSNRMEFAEW-----------QFQTFWNYVTRRDAA
        ID   +AR+      + TQ+   S            DI Q  + L+   ++ E  ++           Q Q FW Y   RD A
Subjt:  IDIPNLARL------QRTQEARQSGLVC--------DIHQMQEQLQMHSNRMEFAEW-----------QFQTFWNYVTRRDAA

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]4.9e-1730.09Show/hide
Query:  LKRDFLFERGFGNDLPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAA
        ++++F+++     + P F+   I  H    FC  PE     +V EFYTN+   +      RGV V  S                            L   
Subjt:  LKRDFLFERGFGNDLPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAA

Query:  VREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQR
        +  V I GA+W  S     T   + L   A  W  F+K RLLPTTH  TVS++ V L++ +L   SI+VG++I  EI +   +K G LFF + IT +C+ 
Subjt:  VREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQR

Query:  TGVPMNADDVTLMDKG
        T  P   ++  L + G
Subjt:  TGVPMNADDVTLMDKG

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.9e-1731.05Show/hide
Query:  VVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAAVREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRL
        +V EFY N+ + E      RGV V WS                            L   +  V   GA+W  S     T   + L   A  W  F+K RL
Subjt:  VVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAAVREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRL

Query:  LPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDIPNLARL--------------Q
        LPTTH   VS+DR+LL+  +L   SI+VG++I SEI +   +K G LFF + IT LC+    P   ++  L + G ID   +AR+               
Subjt:  LPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDIPNLARL--------------Q

Query:  RTQEARQSGLVCDIHQMQEQLQMHSNRMEFAEWQFQTFWNYVTRRDAA
        R   A  S    D+ Q  + L+   ++ E    Q Q FW Y   RD A
Subjt:  RTQEARQSGLVCDIHQMQEQLQMHSNRMEFAEWQFQTFWNYVTRRDAA

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)8.0e-2132.41Show/hide
Query:  RFVNVLARAKYIEMLK-RDFLFERGFGND-------LPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS----------
        +F    A  +Y   ++ R    E+GF  D       LP F+   I  H   QFC  PE     +V EFY N+ +        RGV V WS          
Subjt:  RFVNVLARAKYIEMLK-RDFLFERGFGND-------LPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS----------

Query:  -----------------PLNAAVREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIH
                          L   +  V + GA+W  S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+  +L   SI+VG++I SEI 
Subjt:  -----------------PLNAAVREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIH

Query:  SSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDIPNLARLQRTQE
        +   +K G LFF + IT LC+    P   ++  L + G ID   +AR+  TQE
Subjt:  SSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDIPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)9.4e-2230.74Show/hide
Query:  FLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAAVREVGIEGAQWRFSKTE
        F+   I  H   QFC  PE     +V EFY N+ + E      RGV V WS                            L   +  V   GA+W  S   
Subjt:  FLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAAVREVGIEGAQWRFSKTE

Query:  KRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGI
          T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+  +L   SI+VG++I SEI +   +K G LFF + IT LC+    P   ++  L + G 
Subjt:  KRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGI

Query:  IDIPNLARL------QRTQEARQSGLVC--------DIHQMQEQLQMHSNRMEFAEW-----------QFQTFWNYVTRRDAA
        ID   +AR+      + TQ+   S            DI Q  + L+   ++ E  ++           Q Q FW Y   RD A
Subjt:  IDIPNLARL------QRTQEARQSGLVC--------DIHQMQEQLQMHSNRMEFAEW-----------QFQTFWNYVTRRDAA

A0A2P5DAQ2 Uncharacterized protein2.4e-1730.09Show/hide
Query:  LKRDFLFERGFGNDLPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAA
        ++++F+++     + P F+   I  H    FC  PE     +V EFYTN+   +      RGV V  S                            L   
Subjt:  LKRDFLFERGFGNDLPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAA

Query:  VREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQR
        +  V I GA+W  S     T   + L   A  W  F+K RLLPTTH  TVS++ V L++ +L   SI+VG++I  EI +   +K G LFF + IT +C+ 
Subjt:  VREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQR

Query:  TGVPMNADDVTLMDKG
        T  P   ++  L + G
Subjt:  TGVPMNADDVTLMDKG

A0A2P5DXM3 Uncharacterized protein2.4e-1731.05Show/hide
Query:  VVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAAVREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRL
        +V EFY N+ + E      RGV V WS                            L   +  V   GA+W  S     T   + L   A  W  F+K RL
Subjt:  VVLEFYTNIDEEEGFQAIDRGVAVDWS---------------------------PLNAAVREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRL

Query:  LPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDIPNLARL--------------Q
        LPTTH   VS+DR+LL+  +L   SI+VG++I SEI +   +K G LFF + IT LC+    P   ++  L + G ID   +AR+               
Subjt:  LPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDIPNLARL--------------Q

Query:  RTQEARQSGLVCDIHQMQEQLQMHSNRMEFAEWQFQTFWNYVTRRDAA
        R   A  S    D+ Q  + L+   ++ E    Q Q FW Y   RD A
Subjt:  RTQEARQSGLVCDIHQMQEQLQMHSNRMEFAEWQFQTFWNYVTRRDAA

A0A7J6FZ22 Uncharacterized protein6.3e-1829.83Show/hide
Query:  PRLPYNRFVNV---LARAKYIEMLK-RDFLFERG-------FGNDLPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTN-IDEEEGFQAIDRGVAVDWS
        PR    R  N+   L + KY+  ++ ++F  +RG       FG+ +P +L   I      Q C  P  A   VV EFY N +  E   +   R V V +S
Subjt:  PRLPYNRFVNV---LARAKYIEMLK-RDFLFERG-------FGNDLPHFLRAGIANHGLSQFCTKPEPANSNVVLEFYTN-IDEEEGFQAIDRGVAVDWS

Query:  PLNAAVREVG----IEGAQWRFSKTEKR------------TFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHS
              R++     ++   + FSK   +             F+   LK +      F++  LLPT+HDSTVSR+R+ +++ I++   I+VGK+I+ EI  
Subjt:  PLNAAVREVG----IEGAQWRFSKTEKR------------TFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVILRSLSIDVGKIISSEIHS

Query:  SWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDI-PNLARLQRTQEARQSGLVCDIHQMQEQLQMHSNRMEFAEWQFQTFWNYVTRRD
           +  GKLFFS  IT  C+   VPM  D+  +  KG++   P+ A  + T     +    D   M E+L  H    +    + QT WNY   RD
Subjt:  SWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDI-PNLARLQRTQEARQSGLVCDIHQMQEQLQMHSNRMEFAEWQFQTFWNYVTRRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGACGAGAGGAAGGAAAGAAAGGGATGCTGAGGAAGAAAAGGTGCCGATTACACCTGAGGCAACGAAGACAAAGACGAAGAAGAGGAAAACGCCGGAACAAAG
AGAGGCAAAGAGACGAAGAAGGCAACAGAGGGCTGAAGTTGACGAAGTTGTAAGGAAAGTAGTGGAAGATGTCGCTGAGAAAGAAGTTGAAGAAGAGCAACCGAAGGAAC
CTGAGGAACAAAATCCTGGACAGAGCGAGCCGATAATTGAAAATCTGCAAGAAGTTCAAGAGAAGCAAGCGGAGGATAAGGTCGGACGAATCAAGGTAATACGAACAGTT
ACTCCTTCGCCGTCGACGACTGAATCTGAAAAAGAAAACTCGGAAAGAGAAGAGCAAGAGAAAAAGGGGTCAGAGGACCAGGTAAGAAAAGAAACAGAAAAGAAGTCAGA
GGAAGATATTTTGGCAAAGCAAAGAGAGGACAAGGGCAAAGGAATTGTTGAAGCCCCGACAGAGACAGAAGAGGATGATCCTGAGGAACCGAGATTGCCGTATAATCGCT
TCGTCAATGTTCTTGCCCGAGCAAAGTATATAGAGATGTTGAAAAGGGATTTTCTGTTTGAGAGAGGATTTGGTAATGATCTGCCGCATTTCTTGAGGGCTGGAATAGCA
AATCACGGATTGAGTCAATTCTGCACGAAACCTGAACCGGCAAATTCGAATGTTGTTCTTGAATTTTACACGAACATAGATGAAGAAGAGGGGTTTCAAGCAATTGATCG
TGGGGTGGCAGTCGACTGGAGCCCCTTGAACGCAGCTGTTCGAGAGGTGGGAATCGAGGGGGCCCAGTGGCGTTTTTCGAAAACAGAGAAGAGAACCTTCCAAGCGGCCT
ATCTCAAGAGCGAGGCCAACACTTGGTTGGGATTCATAAAGTTACGCCTACTGCCAACCACTCACGACTCTACTGTCTCGCGTGATCGAGTTCTTCTGGTATTTGTTATT
TTGAGATCATTAAGTATAGATGTTGGAAAAATAATCTCCAGTGAAATTCATTCCAGTTGGAGGAAGAAAGTGGGTAAGCTCTTTTTCTCGAACACAATAACTATGTTGTG
TCAAAGAACTGGGGTTCCCATGAACGCAGACGATGTTACTTTAATGGACAAGGGAATAATAGACATCCCGAACCTGGCGAGGCTTCAGAGGACTCAAGAAGCACGCCAAA
GCGGTTTGGTGTGCGACATCCATCAAATGCAGGAGCAGTTGCAAATGCATTCCAATCGAATGGAGTTCGCCGAATGGCAATTCCAAACCTTCTGGAATTATGTGACGCGA
AGGGATGCTGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGACGAGAGGAAGGAAAGAAAGGGATGCTGAGGAAGAAAAGGTGCCGATTACACCTGAGGCAACGAAGACAAAGACGAAGAAGAGGAAAACGCCGGAACAAAG
AGAGGCAAAGAGACGAAGAAGGCAACAGAGGGCTGAAGTTGACGAAGTTGTAAGGAAAGTAGTGGAAGATGTCGCTGAGAAAGAAGTTGAAGAAGAGCAACCGAAGGAAC
CTGAGGAACAAAATCCTGGACAGAGCGAGCCGATAATTGAAAATCTGCAAGAAGTTCAAGAGAAGCAAGCGGAGGATAAGGTCGGACGAATCAAGGTAATACGAACAGTT
ACTCCTTCGCCGTCGACGACTGAATCTGAAAAAGAAAACTCGGAAAGAGAAGAGCAAGAGAAAAAGGGGTCAGAGGACCAGGTAAGAAAAGAAACAGAAAAGAAGTCAGA
GGAAGATATTTTGGCAAAGCAAAGAGAGGACAAGGGCAAAGGAATTGTTGAAGCCCCGACAGAGACAGAAGAGGATGATCCTGAGGAACCGAGATTGCCGTATAATCGCT
TCGTCAATGTTCTTGCCCGAGCAAAGTATATAGAGATGTTGAAAAGGGATTTTCTGTTTGAGAGAGGATTTGGTAATGATCTGCCGCATTTCTTGAGGGCTGGAATAGCA
AATCACGGATTGAGTCAATTCTGCACGAAACCTGAACCGGCAAATTCGAATGTTGTTCTTGAATTTTACACGAACATAGATGAAGAAGAGGGGTTTCAAGCAATTGATCG
TGGGGTGGCAGTCGACTGGAGCCCCTTGAACGCAGCTGTTCGAGAGGTGGGAATCGAGGGGGCCCAGTGGCGTTTTTCGAAAACAGAGAAGAGAACCTTCCAAGCGGCCT
ATCTCAAGAGCGAGGCCAACACTTGGTTGGGATTCATAAAGTTACGCCTACTGCCAACCACTCACGACTCTACTGTCTCGCGTGATCGAGTTCTTCTGGTATTTGTTATT
TTGAGATCATTAAGTATAGATGTTGGAAAAATAATCTCCAGTGAAATTCATTCCAGTTGGAGGAAGAAAGTGGGTAAGCTCTTTTTCTCGAACACAATAACTATGTTGTG
TCAAAGAACTGGGGTTCCCATGAACGCAGACGATGTTACTTTAATGGACAAGGGAATAATAGACATCCCGAACCTGGCGAGGCTTCAGAGGACTCAAGAAGCACGCCAAA
GCGGTTTGGTGTGCGACATCCATCAAATGCAGGAGCAGTTGCAAATGCATTCCAATCGAATGGAGTTCGCCGAATGGCAATTCCAAACCTTCTGGAATTATGTGACGCGA
AGGGATGCTGCGTAG
Protein sequenceShow/hide protein sequence
MAKTRGRKERDAEEEKVPITPEATKTKTKKRKTPEQREAKRRRRQQRAEVDEVVRKVVEDVAEKEVEEEQPKEPEEQNPGQSEPIIENLQEVQEKQAEDKVGRIKVIRTV
TPSPSTTESEKENSEREEQEKKGSEDQVRKETEKKSEEDILAKQREDKGKGIVEAPTETEEDDPEEPRLPYNRFVNVLARAKYIEMLKRDFLFERGFGNDLPHFLRAGIA
NHGLSQFCTKPEPANSNVVLEFYTNIDEEEGFQAIDRGVAVDWSPLNAAVREVGIEGAQWRFSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFVI
LRSLSIDVGKIISSEIHSSWRKKVGKLFFSNTITMLCQRTGVPMNADDVTLMDKGIIDIPNLARLQRTQEARQSGLVCDIHQMQEQLQMHSNRMEFAEWQFQTFWNYVTR
RDAA