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Spg019113 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019113
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPolyprotein
Genome locationscaffold1:45366802..45368885
RNA-Seq ExpressionSpg019113
SyntenySpg019113
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025901.1 hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa]2.6e-2058.51Show/hide
Query:  FQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASST-----QEEENEDPDYDLDDPFLDSQPM
        FQ+AT+  +KEWF  NGYLQDID  +N +FLN+KSKLLA LAQ T+DADFQR+L    ++++ + ST     ++EE  DP+YDLD+PFLDSQPM
Subjt:  FQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASST-----QEEENEDPDYDLDDPFLDSQPM

KAA0034823.1 hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa]1.2e-2065.96Show/hide
Query:  FQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA----ASSASPASSTQEEENE-DPDYDLDDPFLDSQPM
        FQ+AT+  +KEWFA N YLQDID ++N EFLNDKSKLL ALAQ T+DADFQR+L  A    +SS SP+SS QE+E + DP+YDLDD  LDSQPM
Subjt:  FQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA----ASSASPASSTQEEENE-DPDYDLDDPFLDSQPM

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]5.2e-2445.15Show/hide
Query:  MSVDQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQ
        MS DQYAM+LGFT VTRSRSR   IR   P ESST PP+PS NL+RPSGGVVQ+R PVSPSS   SS P  +TYS AVTP+K                  
Subjt:  MSVDQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQ

Query:  NSHQDPKDQMVGQIQFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL----QMAASSASPASSTQEEENE-DPDYDLD
                                                        +SKLLAALAQ T+DADFQR+L      ++SS SP+SS QE+E + D +YDLD
Subjt:  NSHQDPKDQMVGQIQFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL----QMAASSASPASSTQEEENE-DPDYDLD

Query:  DPFLDS
        DP+LDS
Subjt:  DPFLDS

KAA0059031.1 polyprotein [Cucumis melo var. makuwa]7.7e-2054.26Show/hide
Query:  PPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQNSHQDPKDQMVGQIQFQNATLNKVKEWFAANGYLQD
        PPRPSANL+R SG  VQ+RP  S SS   SS P S+TYS  VTP+K    +      Q    ++N     K +   +  FQ+AT+  +KEWFA NGYLQD
Subjt:  PPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQNSHQDPKDQMVGQIQFQNATLNKVKEWFAANGYLQD

Query:  IDIKRNAEFLNDKSKLLAALAQTTSDADF
        ID ++N EFLNDKSKLLAALAQ T+DADF
Subjt:  IDIKRNAEFLNDKSKLLAALAQTTSDADF

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]1.7e-3048.8Show/hide
Query:  MSVDQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQ
        MSVDQYAM+LG+T V +SRS+  GI    PMESST PPRPS NL+ P G V+Q+R   SPSS   SS    +TYS AVTP+K  V               
Subjt:  MSVDQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQ

Query:  NSHQDPKDQMVGQIQFQNATLNKVKEW-FAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA---ASSASPASS--TQEEENEDPDYDL
             P+ ++    Q      + + E  +  NG LQDID ++NA+FLNDK K LAAL Q T DADFQR+L  A   +SS+ PA S   ++EE  D +YDL
Subjt:  NSHQDPKDQMVGQIQFQNATLNKVKEW-FAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA---ASSASPASS--TQEEENEDPDYDL

Query:  DDPFLDSQP
        DDPFLDSQP
Subjt:  DDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SNT5 Uncharacterized protein1.3e-2058.51Show/hide
Query:  FQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASST-----QEEENEDPDYDLDDPFLDSQPM
        FQ+AT+  +KEWF  NGYLQDID  +N +FLN+KSKLLA LAQ T+DADFQR+L    ++++ + ST     ++EE  DP+YDLD+PFLDSQPM
Subjt:  FQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASST-----QEEENEDPDYDLDDPFLDSQPM

A0A5A7SWC0 Uncharacterized protein5.8e-2165.96Show/hide
Query:  FQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA----ASSASPASSTQEEENE-DPDYDLDDPFLDSQPM
        FQ+AT+  +KEWFA N YLQDID ++N EFLNDKSKLL ALAQ T+DADFQR+L  A    +SS SP+SS QE+E + DP+YDLDD  LDSQPM
Subjt:  FQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA----ASSASPASSTQEEENE-DPDYDLDDPFLDSQPM

A0A5A7U8A0 Uncharacterized protein2.5e-2445.15Show/hide
Query:  MSVDQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQ
        MS DQYAM+LGFT VTRSRSR   IR   P ESST PP+PS NL+RPSGGVVQ+R PVSPSS   SS P  +TYS AVTP+K                  
Subjt:  MSVDQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQ

Query:  NSHQDPKDQMVGQIQFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL----QMAASSASPASSTQEEENE-DPDYDLD
                                                        +SKLLAALAQ T+DADFQR+L      ++SS SP+SS QE+E + D +YDLD
Subjt:  NSHQDPKDQMVGQIQFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL----QMAASSASPASSTQEEENE-DPDYDLD

Query:  DPFLDS
        DP+LDS
Subjt:  DPFLDS

A0A5A7UZX0 Polyprotein3.7e-2054.26Show/hide
Query:  PPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQNSHQDPKDQMVGQIQFQNATLNKVKEWFAANGYLQD
        PPRPSANL+R SG  VQ+RP  S SS   SS P S+TYS  VTP+K    +      Q    ++N     K +   +  FQ+AT+  +KEWFA NGYLQD
Subjt:  PPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQNSHQDPKDQMVGQIQFQNATLNKVKEWFAANGYLQD

Query:  IDIKRNAEFLNDKSKLLAALAQTTSDADF
        ID ++N EFLNDKSKLLAALAQ T+DADF
Subjt:  IDIKRNAEFLNDKSKLLAALAQTTSDADF

A0A5D3BI61 Uncharacterized protein8.0e-3148.8Show/hide
Query:  MSVDQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQ
        MSVDQYAM+LG+T V +SRS+  GI    PMESST PPRPS NL+ P G V+Q+R   SPSS   SS    +TYS AVTP+K  V               
Subjt:  MSVDQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQ

Query:  NSHQDPKDQMVGQIQFQNATLNKVKEW-FAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA---ASSASPASS--TQEEENEDPDYDL
             P+ ++    Q      + + E  +  NG LQDID ++NA+FLNDK K LAAL Q T DADFQR+L  A   +SS+ PA S   ++EE  D +YDL
Subjt:  NSHQDPKDQMVGQIQFQNATLNKVKEW-FAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA---ASSASPASS--TQEEENEDPDYDL

Query:  DDPFLDSQP
        DDPFLDSQP
Subjt:  DDPFLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTAGATCAATATGCTATGGAATTAGGATTTACTCCGGTAACCCGTTCCAGATCAAGGCAAGGCGGTATACGCCCTATGCCTCCAATGGAGTCTTCTACTCCACC
TCCGCGGCCTTCGGCCAACCTCGTCCGTCCTTCAGGCGGAGTCGTTCAACTGAGACCTCCTGTCTCTCCCTCTTCAGTTGTGGGATCATCAATCCCATCTTCTTCAACCT
ACTCTGCGGCGGTAACACCGGAAAAAAGTTCCGTGGATTTTTTGCTGGAACTTCTCAACCAGCAATCAACCACAATACAAAACAGTCACCAAGATCCTAAAGATCAAATG
GTGGGACAAATACAATTTCAGAATGCAACCCTCAACAAGGTTAAAGAGTGGTTTGCGGCCAATGGATATCTTCAGGATATCGACATCAAGAGAAATGCAGAATTTCTCAA
CGACAAATCAAAGCTCCTTGCAGCTCTTGCTCAGACCACATCTGACGCGGACTTCCAAAGAATTCTCCAGATGGCAGCCTCAAGCGCATCTCCAGCTTCTTCTACTCAAG
AAGAAGAAAACGAAGATCCGGATTACGATCTGGACGACCCGTTCCTCGACTCACAACCCATGCATGCGCTGAGAACTCTCAAGCTATCTTATCTTGTAAAGCTTGAATCT
CACCCTGTTTTCTCTTATCAGCTAGTCGATCCTCCTAAGGGCTCCCAAGCTGTTCTCAACCAAGGCTTTGCTCGTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTAGATCAATATGCTATGGAATTAGGATTTACTCCGGTAACCCGTTCCAGATCAAGGCAAGGCGGTATACGCCCTATGCCTCCAATGGAGTCTTCTACTCCACC
TCCGCGGCCTTCGGCCAACCTCGTCCGTCCTTCAGGCGGAGTCGTTCAACTGAGACCTCCTGTCTCTCCCTCTTCAGTTGTGGGATCATCAATCCCATCTTCTTCAACCT
ACTCTGCGGCGGTAACACCGGAAAAAAGTTCCGTGGATTTTTTGCTGGAACTTCTCAACCAGCAATCAACCACAATACAAAACAGTCACCAAGATCCTAAAGATCAAATG
GTGGGACAAATACAATTTCAGAATGCAACCCTCAACAAGGTTAAAGAGTGGTTTGCGGCCAATGGATATCTTCAGGATATCGACATCAAGAGAAATGCAGAATTTCTCAA
CGACAAATCAAAGCTCCTTGCAGCTCTTGCTCAGACCACATCTGACGCGGACTTCCAAAGAATTCTCCAGATGGCAGCCTCAAGCGCATCTCCAGCTTCTTCTACTCAAG
AAGAAGAAAACGAAGATCCGGATTACGATCTGGACGACCCGTTCCTCGACTCACAACCCATGCATGCGCTGAGAACTCTCAAGCTATCTTATCTTGTAAAGCTTGAATCT
CACCCTGTTTTCTCTTATCAGCTAGTCGATCCTCCTAAGGGCTCCCAAGCTGTTCTCAACCAAGGCTTTGCTCGTAATTGA
Protein sequenceShow/hide protein sequence
MSVDQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVVGSSIPSSSTYSAAVTPEKSSVDFLLELLNQQSTTIQNSHQDPKDQM
VGQIQFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASSTQEEENEDPDYDLDDPFLDSQPMHALRTLKLSYLVKLES
HPVFSYQLVDPPKGSQAVLNQGFARN