; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019129 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019129
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposable element Tf2
Genome locationscaffold1:47611324..47615525
RNA-Seq ExpressionSpg019129
SyntenySpg019129
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034823.1 hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa]1.6e-2666.67Show/hide
Query:  ITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA--ASDRSESPASSAQEEEEN-EPDYDLDD
        + K LKIK W+K+NFQ+AT+  +KEWFAEN YLQDID ++N EFLNDKSKLL ALAQ T+DADFQR+L  A  AS  S+SP+SS QE+EE  +P+YDLDD
Subjt:  ITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA--ASDRSESPASSAQEEEEN-EPDYDLDD

Query:  PFLDSQPM
          LDSQPM
Subjt:  PFLDSQPM

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]8.9e-3049.55Show/hide
Query:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYS
        +RGR  ++SS+G+RPSSSS S P PMSADQYAMDLGFT VTRSR+R++  R     ESST PP+PS NL+RPSGGVVQMR PVSP+S   SS P  +TYS
Subjt:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYS

Query:  QAVTPEKSNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQ--MAASDRSESPASSA
        QAVTP+K                                                       +SKLLAALAQ T+DADFQR+L   + AS  S+SP+SS 
Subjt:  QAVTPEKSNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQ--MAASDRSESPASSA

Query:  QEEEEN-EPDYDLDDPFLDS
        QE+EE  + +YDLDDP+LDS
Subjt:  QEEEEN-EPDYDLDDPFLDS

KAA0059031.1 polyprotein [Cucumis melo var. makuwa]4.2e-3265.57Show/hide
Query:  PPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYSQAVTPEK----SNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNA
        PPRPSANL+R SG  VQMRP  S +S   SS P S+TYSQ VTP+K    ++ PQY  + K LKIKWW K+NFQ+AT+  +KEWFA+NGYLQDID ++N 
Subjt:  PPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYSQAVTPEK----SNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNA

Query:  EFLNDKSKLLAALAQTTSDADF
        EFLNDKSKLLAALAQ T+DADF
Subjt:  EFLNDKSKLLAALAQTTSDADF

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]6.8e-2243.58Show/hide
Query:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYS
        +RGR  ++SS+G+  SSSS SAP P  ADQYAM++GFT VTRSR+R++  R + S+  ST PPRPS NL+ PS GVVQMRPP SP+S   SS P S+TYS
Subjt:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYS

Query:  QAVTPEKSNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSESPASSAQE
        QAVTP+K   P+                        ++K +F                      KL+        D   +   Q+ AS  S+SP+SS QE
Subjt:  QAVTPEKSNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSESPASSAQE

Query:  EEEN-EPDYDLDDPFLDS
        +EE  +P+YDLDDPFLDS
Subjt:  EEEN-EPDYDLDDPFLDS

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]9.1e-3552.19Show/hide
Query:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNS-RIGSSIPSSSTY
        +RGR  ++SS+G+ PSSSS SAP PMS DQYAMDLG+T V +SR++++G      MESST PPRPS NL+ P G V+QMR   SP+S R  S++P  +TY
Subjt:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNS-RIGSSIPSSSTY

Query:  SQAVTPEKSNQPQYNTITKILK-IKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSES-PASS
        SQAVTP+K   P+    +   K I  +D           ++  + +NG LQDID ++NA+FLNDK K LAAL Q T DADFQR+L  A +  S S PA S
Subjt:  SQAVTPEKSNQPQYNTITKILK-IKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSES-PASS

Query:  AQEEEENEPD--YDLDDPFLDSQPMRAP
          +E+E + D  YDLDDPFLDSQP RAP
Subjt:  AQEEEENEPD--YDLDDPFLDSQPMRAP

TrEMBL top hitse value%identityAlignment
A0A5A7SWC0 Uncharacterized protein7.6e-2766.67Show/hide
Query:  ITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA--ASDRSESPASSAQEEEEN-EPDYDLDD
        + K LKIK W+K+NFQ+AT+  +KEWFAEN YLQDID ++N EFLNDKSKLL ALAQ T+DADFQR+L  A  AS  S+SP+SS QE+EE  +P+YDLDD
Subjt:  ITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA--ASDRSESPASSAQEEEEN-EPDYDLDD

Query:  PFLDSQPM
          LDSQPM
Subjt:  PFLDSQPM

A0A5A7U8A0 Uncharacterized protein4.3e-3049.55Show/hide
Query:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYS
        +RGR  ++SS+G+RPSSSS S P PMSADQYAMDLGFT VTRSR+R++  R     ESST PP+PS NL+RPSGGVVQMR PVSP+S   SS P  +TYS
Subjt:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYS

Query:  QAVTPEKSNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQ--MAASDRSESPASSA
        QAVTP+K                                                       +SKLLAALAQ T+DADFQR+L   + AS  S+SP+SS 
Subjt:  QAVTPEKSNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQ--MAASDRSESPASSA

Query:  QEEEEN-EPDYDLDDPFLDS
        QE+EE  + +YDLDDP+LDS
Subjt:  QEEEEN-EPDYDLDDPFLDS

A0A5A7UZX0 Polyprotein2.1e-3265.57Show/hide
Query:  PPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYSQAVTPEK----SNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNA
        PPRPSANL+R SG  VQMRP  S +S   SS P S+TYSQ VTP+K    ++ PQY  + K LKIKWW K+NFQ+AT+  +KEWFA+NGYLQDID ++N 
Subjt:  PPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYSQAVTPEK----SNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNA

Query:  EFLNDKSKLLAALAQTTSDADF
        EFLNDKSKLLAALAQ T+DADF
Subjt:  EFLNDKSKLLAALAQTTSDADF

A0A5D3BI61 Uncharacterized protein4.4e-3552.19Show/hide
Query:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNS-RIGSSIPSSSTY
        +RGR  ++SS+G+ PSSSS SAP PMS DQYAMDLG+T V +SR++++G      MESST PPRPS NL+ P G V+QMR   SP+S R  S++P  +TY
Subjt:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNS-RIGSSIPSSSTY

Query:  SQAVTPEKSNQPQYNTITKILK-IKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSES-PASS
        SQAVTP+K   P+    +   K I  +D           ++  + +NG LQDID ++NA+FLNDK K LAAL Q T DADFQR+L  A +  S S PA S
Subjt:  SQAVTPEKSNQPQYNTITKILK-IKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSES-PASS

Query:  AQEEEENEPD--YDLDDPFLDSQPMRAP
          +E+E + D  YDLDDPFLDSQP RAP
Subjt:  AQEEEENEPD--YDLDDPFLDSQPMRAP

A0A5D3BPD3 Uncharacterized protein3.3e-2243.58Show/hide
Query:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYS
        +RGR  ++SS+G+  SSSS SAP P  ADQYAM++GFT VTRSR+R++  R + S+  ST PPRPS NL+ PS GVVQMRPP SP+S   SS P S+TYS
Subjt:  SRGR--ASSSRGSRPSSSS-SAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYS

Query:  QAVTPEKSNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSESPASSAQE
        QAVTP+K   P+                        ++K +F                      KL+        D   +   Q+ AS  S+SP+SS QE
Subjt:  QAVTPEKSNQPQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSESPASSAQE

Query:  EEEN-EPDYDLDDPFLDS
        +EE  +P+YDLDDPFLDS
Subjt:  EEEN-EPDYDLDDPFLDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGAAGTAGAGGCAGAGCCTCCTCTTCAAGGGGCAGTCGCCCATCTTCTTCCTCTTCAGCACCTCCTCCTATGAGTGCTGATCAATATGCAATGGATCTAGGGTT
TACCCCGGTAACCCGATCTAGAGCACGAACGGCCGGCACACGACCGATGCTTTCAATGGAGTCATCTACTCCACCTCCAAGGCCTTCTGCCAACCTTGTCCGTCCTTCCG
GCGGAGTTGTTCAAATGAGACCTCCTGTCTCACCCAATTCAAGGATAGGATCATCGATCCCATCATCTTCGACATATTCTCAGGCGGTAACACCAGAAAAGAGCAATCAG
CCTCAATACAATACCATCACAAAGATCCTCAAGATCAAATGGTGGGATAAATTTAATTTCCAAAACGCCACCCTCAACAAGGTAAAGGAGTGGTTTGCAGAAAATGGATA
TCTTCAAGATATTGACATCAAGAGGAATGCAGAGTTCCTCAATGACAAATCCAAGCTTCTGGCAGCTCTAGCACAGACGACATCTGATGCAGACTTCCAGAGAATCCTTC
AAATGGCAGCTTCAGACAGAAGCGAGTCACCAGCTTCTTCTGCACAAGAAGAAGAAGAAAACGAGCCGGACTACGATCTGGACGATCCGTTCCTCGACTCACAACCCATG
CGAGCTCCGACGCTAACTCTAACGCAACCTAGACTACATGCAATGCATTATCTTGCTCTACTTAGACATTTCCACATGCGTTACCCTTCTGGGATTTATCATGCTGCTAC
CGCAACTGGCTGGCCAGGTGGGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGAAGTAGAGGCAGAGCCTCCTCTTCAAGGGGCAGTCGCCCATCTTCTTCCTCTTCAGCACCTCCTCCTATGAGTGCTGATCAATATGCAATGGATCTAGGGTT
TACCCCGGTAACCCGATCTAGAGCACGAACGGCCGGCACACGACCGATGCTTTCAATGGAGTCATCTACTCCACCTCCAAGGCCTTCTGCCAACCTTGTCCGTCCTTCCG
GCGGAGTTGTTCAAATGAGACCTCCTGTCTCACCCAATTCAAGGATAGGATCATCGATCCCATCATCTTCGACATATTCTCAGGCGGTAACACCAGAAAAGAGCAATCAG
CCTCAATACAATACCATCACAAAGATCCTCAAGATCAAATGGTGGGATAAATTTAATTTCCAAAACGCCACCCTCAACAAGGTAAAGGAGTGGTTTGCAGAAAATGGATA
TCTTCAAGATATTGACATCAAGAGGAATGCAGAGTTCCTCAATGACAAATCCAAGCTTCTGGCAGCTCTAGCACAGACGACATCTGATGCAGACTTCCAGAGAATCCTTC
AAATGGCAGCTTCAGACAGAAGCGAGTCACCAGCTTCTTCTGCACAAGAAGAAGAAGAAAACGAGCCGGACTACGATCTGGACGATCCGTTCCTCGACTCACAACCCATG
CGAGCTCCGACGCTAACTCTAACGCAACCTAGACTACATGCAATGCATTATCTTGCTCTACTTAGACATTTCCACATGCGTTACCCTTCTGGGATTTATCATGCTGCTAC
CGCAACTGGCTGGCCAGGTGGGCATTAA
Protein sequenceShow/hide protein sequence
MSGSRGRASSSRGSRPSSSSSAPPPMSADQYAMDLGFTPVTRSRARTAGTRPMLSMESSTPPPRPSANLVRPSGGVVQMRPPVSPNSRIGSSIPSSSTYSQAVTPEKSNQ
PQYNTITKILKIKWWDKFNFQNATLNKVKEWFAENGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSESPASSAQEEEENEPDYDLDDPFLDSQPM
RAPTLTLTQPRLHAMHYLALLRHFHMRYPSGIYHAATATGWPGGH