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Spg019153 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019153
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-3-methyladenine glycosylase 1-like
Genome locationscaffold1:49498221..49502285
RNA-Seq ExpressionSpg019153
SyntenySpg019153
Gene Ontology termsGO:0006285 - base-excision repair, AP site formation (biological process)
GO:0006307 - DNA dealkylation involved in DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0032993 - protein-DNA complex (cellular component)
GO:0008725 - DNA-3-methyladenine glycosylase activity (molecular function)
GO:0032131 - alkylated DNA binding (molecular function)
GO:0043916 - DNA-7-methylguanine glycosylase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603971.1 Zinc-finger homeodomain protein 6, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0989.19Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKPVEMEKLCEKW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

KAG7034142.1 mag1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-0989.19Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKPVEMEKLCEKW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

XP_022132520.1 DNA-3-methyladenine glycosylase 1-like [Momordica charantia]3.6e-0986.49Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKPVEMEKLC+KW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

XP_022949777.1 DNA-3-methyladenine glycosylase 1-like [Cucurbita moschata]1.6e-0989.19Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKPVEMEKLCEKW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

XP_022978525.1 DNA-3-methyladenine glycosylase 1-like [Cucurbita maxima]1.6e-0989.19Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKPVEMEKLCEKW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

TrEMBL top hitse value%identityAlignment
A0A0A0KM62 ENDO3c domain-containing protein2.3e-0986.49Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKP EMEKLCEKW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

A0A5A7T3R0 Putative DNA-3-methyladenine glycosylase 22.3e-0986.49Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKP EMEKLCEKW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

A0A6J1BSP4 DNA-3-methyladenine glycosylase 1-like1.8e-0986.49Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKPVEMEKLC+KW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

A0A6J1GD23 DNA-3-methyladenine glycosylase 1-like7.9e-1089.19Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKPVEMEKLCEKW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

A0A6J1IQD1 DNA-3-methyladenine glycosylase 1-like7.9e-1089.19Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE
        +VLPVG LG+RKGVQRLYGLKELPKPVEMEKLCEKW+
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19480.1 DNA glycosylase superfamily protein1.6e-0763.89Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKW
        +VLPV  LG+RKGVQ LYGL +LP+P +ME+ C KW
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKW

AT1G19480.2 DNA glycosylase superfamily protein1.6e-0763.89Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKW
        +VLPV  LG+RKGVQ LYGL +LP+P +ME+ C KW
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKW

AT1G75230.1 DNA glycosylase superfamily protein8.1e-0744.74Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWELALSLS--------------PAAAASLRRTAAALSPPSL
        +VLPV  LG+RKGVQ L G+++LP+P +ME+LCEKW    S++              P AAA+     AALS P L
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWELALSLS--------------PAAAASLRRTAAALSPPSL

AT1G75230.2 DNA glycosylase superfamily protein8.1e-0744.74Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWELALSLS--------------PAAAASLRRTAAALSPPSL
        +VLPV  LG+RKGVQ L G+++LP+P +ME+LCEKW    S++              P AAA+     AALS P L
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWELALSLS--------------PAAAASLRRTAAALSPPSL

AT3G50880.1 DNA glycosylase superfamily protein1.3e-0972.22Show/hide
Query:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKW
        +VLPVG LG+RKGV+ LYGLK LP P++ME+LCEKW
Subjt:  NVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTACAATCGCTTCGTCGCACTATGCAACGGCGAGGCGGCGGTACTGCCGGCCGCCGTGCTGGCACTCTCGCTGCAACAGCTGCGAGTAATCGAAATGTTTTGCC
GGTGGGGCACTTGGGCATTAGAAAAGGGGTGCAGAGATTGTACGGACTGAAGGAGTTGCCGAAGCCGGTGGAGATGGAGAAACTGTGTGAGAAATGGGAGCTTGCTCTCT
CTCTGTCGCCCGCCGCCGCCGCCTCCCTTCGTCGTACTGCCGCCGCGCTGTCGCCTCCTTCGTTGCACGCCACCCGTCGACGTCGTGCACCGCCTCCCACCGTCGGGCTT
CGCTGCTCACCGCCGTCGTCCTCAGCCTTTTCTCGCTCGTCGTCGCGTCGCCGCCACTGTCATCGCCTTCACCGCCACGAGCCGTCGTCTATCTGTGGTCGTCGTCGTTC
AAGTCTGTTCGTCGCTTTTCGGATCTGTGTGTCGCTTTTCAGATCTGTTGTCGTCGTCGTTCGATTGTTCAACCTTACTTCTAAAGAATTAGTTGGAACCCGTTATGAGC
TAGCAGGTGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGATTGATCAGCTAAACTCATTAACCGAATATCGACCAATGCAGGTCCAACCACTAAACAGG
AGTTCCTCTCAGGCCAGGAGAGGACGACACGCCTTTGTTCAAGCTCCGGAATCAGCCCTTAAGGGAACACACATCTACTTGCCCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCTACAATCGCTTCGTCGCACTATGCAACGGCGAGGCGGCGGTACTGCCGGCCGCCGTGCTGGCACTCTCGCTGCAACAGCTGCGAGTAATCGAAATGTTTTGCC
GGTGGGGCACTTGGGCATTAGAAAAGGGGTGCAGAGATTGTACGGACTGAAGGAGTTGCCGAAGCCGGTGGAGATGGAGAAACTGTGTGAGAAATGGGAGCTTGCTCTCT
CTCTGTCGCCCGCCGCCGCCGCCTCCCTTCGTCGTACTGCCGCCGCGCTGTCGCCTCCTTCGTTGCACGCCACCCGTCGACGTCGTGCACCGCCTCCCACCGTCGGGCTT
CGCTGCTCACCGCCGTCGTCCTCAGCCTTTTCTCGCTCGTCGTCGCGTCGCCGCCACTGTCATCGCCTTCACCGCCACGAGCCGTCGTCTATCTGTGGTCGTCGTCGTTC
AAGTCTGTTCGTCGCTTTTCGGATCTGTGTGTCGCTTTTCAGATCTGTTGTCGTCGTCGTTCGATTGTTCAACCTTACTTCTAAAGAATTAGTTGGAACCCGTTATGAGC
TAGCAGGTGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGATTGATCAGCTAAACTCATTAACCGAATATCGACCAATGCAGGTCCAACCACTAAACAGG
AGTTCCTCTCAGGCCAGGAGAGGACGACACGCCTTTGTTCAAGCTCCGGAATCAGCCCTTAAGGGAACACACATCTACTTGCCCCAATAG
Protein sequenceShow/hide protein sequence
MDLQSLRRTMQRRGGGTAGRRAGTLAATAASNRNVLPVGHLGIRKGVQRLYGLKELPKPVEMEKLCEKWELALSLSPAAAASLRRTAAALSPPSLHATRRRRAPPPTVGL
RCSPPSSSAFSRSSSRRRHCHRLHRHEPSSICGRRRSSLFVAFRICVSLFRSVVVVVRLFNLTSKELVGTRYELAGGPNGPTDQKLQRYEIDQLNSLTEYRPMQVQPLNR
SSSQARRGRHAFVQAPESALKGTHIYLPQ