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Spg019158 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019158
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIg-like V-type domain-containing protein FAM187A
Genome locationscaffold1:43432320..43435422
RNA-Seq ExpressionSpg019158
SyntenySpg019158
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A218UGV0 Ig-like V-type domain-containing protein FAM187A5.9e-0440.65Show/hide
Query:  GLLKSSNLEGSSMFKKSWGLEVFKILKGLQSSRSLGVLKSLRVFGLLGLLKSSSLEGSSIFKKSWGLEVLKRLLKSSGLEGSSVFKKSWGLEVLKRLLKS
        GL +S+ LE S+  ++S GLE   I  GL+ S  L  L  L  F   GL +S  LE S+  ++S GLEV   L +S+GLE S+  ++S GLE+   L +S
Subjt:  GLLKSSNLEGSSMFKKSWGLEVFKILKGLQSSRSLGVLKSLRVFGLLGLLKSSSLEGSSIFKKSWGLEVLKRLLKSSGLEGSSVFKKSWGLEVLKRLLKS

Query:  SSLEGSSVFKKSWGL-EVFGLQE
        + LE     ++S GL E  GL+E
Subjt:  SSLEGSSVFKKSWGL-EVFGLQE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCGGCCTACTTTGCGAATGAGGCAAACGATGTGATATTGGATTGTTCATGTAGAGACATGCGAGATTATCCTTTGATCTGCATGGGATTGTTGAAGTCCTCTAA
TCTTGAAGGGTCTTCAATGTTCAAGAAGTCTTGGGGTCTTGAAGTCTTTAAGATCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTTAAGAGTCT
TTGGCCTTCTAGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAATCTTCAAGAAGTCTTGGGGTCTTGAAGTATTGAAGAGATTGTTGAAGTCTTCTGGTCTTGAA
GGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTATTGAAGAGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGT
CTTTGGTCTTCAAGAATTGTTGAAGTCTTCTTTGAATTCTCTGACTCTGGCTTGGAGCTTCAAAATTCTGACCCTTTCTTTCTGCTGCCCCTCTCAAATGAGTCAAGGCC
TCCTATTTATAGAGTTTTCCAAAGGCCTTTGCGGGCTTGGGCTTAAATTGGCTTGGGGCCAACTATTTGGTTTTGGAGATTTGCTGAAGAAAATCTTCTTCTTACTTAAG
GAATTGCTGCTAAAATCTCTCCACACCAAAACCCACCTCCATAGCTTGTTCTTCAAGCTTTTCCCATCAAATTCCCTCACTAGAGGATCCCACAATCCGCTCCAAAGGCT
TGAGGACAGCAAGGAAGATCAAGTGGTGGTTCGTGGCTTATTGGAGAAGAAAAACAACAAAAGGATTCAGCTAATTTCACCAATTAAAGTGGTTGGTGTTACTGTCTCTG
TTTTTCTTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCGGCCTACTTTGCGAATGAGGCAAACGATGTGATATTGGATTGTTCATGTAGAGACATGCGAGATTATCCTTTGATCTGCATGGGATTGTTGAAGTCCTCTAA
TCTTGAAGGGTCTTCAATGTTCAAGAAGTCTTGGGGTCTTGAAGTCTTTAAGATCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTTAAGAGTCT
TTGGCCTTCTAGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAATCTTCAAGAAGTCTTGGGGTCTTGAAGTATTGAAGAGATTGTTGAAGTCTTCTGGTCTTGAA
GGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTATTGAAGAGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGT
CTTTGGTCTTCAAGAATTGTTGAAGTCTTCTTTGAATTCTCTGACTCTGGCTTGGAGCTTCAAAATTCTGACCCTTTCTTTCTGCTGCCCCTCTCAAATGAGTCAAGGCC
TCCTATTTATAGAGTTTTCCAAAGGCCTTTGCGGGCTTGGGCTTAAATTGGCTTGGGGCCAACTATTTGGTTTTGGAGATTTGCTGAAGAAAATCTTCTTCTTACTTAAG
GAATTGCTGCTAAAATCTCTCCACACCAAAACCCACCTCCATAGCTTGTTCTTCAAGCTTTTCCCATCAAATTCCCTCACTAGAGGATCCCACAATCCGCTCCAAAGGCT
TGAGGACAGCAAGGAAGATCAAGTGGTGGTTCGTGGCTTATTGGAGAAGAAAAACAACAAAAGGATTCAGCTAATTTCACCAATTAAAGTGGTTGGTGTTACTGTCTCTG
TTTTTCTTCCATAG
Protein sequenceShow/hide protein sequence
MDAAYFANEANDVILDCSCRDMRDYPLICMGLLKSSNLEGSSMFKKSWGLEVFKILKGLQSSRSLGVLKSLRVFGLLGLLKSSSLEGSSIFKKSWGLEVLKRLLKSSGLE
GSSVFKKSWGLEVLKRLLKSSSLEGSSVFKKSWGLEVFGLQELLKSSLNSLTLAWSFKILTLSFCCPSQMSQGLLFIEFSKGLCGLGLKLAWGQLFGFGDLLKKIFFLLK
ELLLKSLHTKTHLHSLFFKLFPSNSLTRGSHNPLQRLEDSKEDQVVVRGLLEKKNNKRIQLISPIKVVGVTVSVFLP