; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019159 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019159
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold1:44955849..44961318
RNA-Seq ExpressionSpg019159
SyntenySpg019159
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-1447.46Show/hide
Query:  FHFFRPRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSS--------STFQ---EGQRVSLEEGDVRW
        F F  PR +       ++   PEA  YRVHTGY+PLLTLSVLRDND IVEIE  VP+ L  S E+  S  S        S FQ     +++S+E+  V  
Subjt:  FHFFRPRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSS--------STFQ---EGQRVSLEEGDVRW

Query:  LHAIFRTELAGGLGGGVT
        LH +F+++LAG LGGGVT
Subjt:  LHAIFRTELAGGLGGGVT

KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-1451.35Show/hide
Query:  PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQ---EGQRVS-------LEEGDVRWLHAIFR
        PRGNR SLQT +L KT              L TLSVLRDND +VEIELP+PDTLPTSAES  S+SS+  +   E   V        +   DV WLHA+FR
Subjt:  PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQ---EGQRVS-------LEEGDVRWLHAIFR

Query:  TELAGGLGGGV
         +  GG GGGV
Subjt:  TELAGGLGGGV

KAA0060199.1 uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa]5.8e-1957.41Show/hide
Query:  RFHFFRPRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQEGQRVSLEEGDVRWLHAIFRTELA
        + +  RPRGNR SLQT KL KT              L TLSVLRDND +VEIELPVPDTLPTSAESF S+S ST        +   DV WLHA+FR + A
Subjt:  RFHFFRPRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQEGQRVSLEEGDVRWLHAIFRTELA

Query:  GGLGGGVT
        GG GGGVT
Subjt:  GGLGGGVT

KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]1.0e-1539.08Show/hide
Query:  IKGSREPRIYVVCVRGISGPIGWESRFHFFR--------------PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLP
        I+  REPRI      G          F F +              PRGNRSSLQT +L KT   +          L TLSVL DN+ +VEIELPVPDTLP
Subjt:  IKGSREPRIYVVCVRGISGPIGWESRFHFFR--------------PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLP

Query:  TSAESFRSSSSSTFQ--------------------------EGQRVSLEEGDVRWLHAIFRTELAGGLGGGVTK
        TSAESF S+SS+  +                          EG    +   DV WLH +FR ++AGG GGGVT+
Subjt:  TSAESFRSSSSSTFQ--------------------------EGQRVSLEEGDVRWLHAIFRTELAGGLGGGVTK

TYK17971.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-1451.35Show/hide
Query:  PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQ---EGQRVS-------LEEGDVRWLHAIFR
        PRGNR SLQT +L KT              L TLSVLRDND +VEIELP+PDTLPTSAES  S+SS+  +   E   V        +   DV WLHA+FR
Subjt:  PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQ---EGQRVS-------LEEGDVRWLHAIFR

Query:  TELAGGLGGGV
         +  GG GGGV
Subjt:  TELAGGLGGGV

TrEMBL top hitse value%identityAlignment
A0A5A7SPZ6 DNA/RNA polymerases superfamily protein5.5e-1547.46Show/hide
Query:  FHFFRPRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSS--------STFQ---EGQRVSLEEGDVRW
        F F  PR +       ++   PEA  YRVHTGY+PLLTLSVLRDND IVEIE  VP+ L  S E+  S  S        S FQ     +++S+E+  V  
Subjt:  FHFFRPRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSS--------STFQ---EGQRVSLEEGDVRW

Query:  LHAIFRTELAGGLGGGVT
        LH +F+++LAG LGGGVT
Subjt:  LHAIFRTELAGGLGGGVT

A0A5A7TKT0 Reverse transcriptase5.5e-1551.35Show/hide
Query:  PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQ---EGQRVS-------LEEGDVRWLHAIFR
        PRGNR SLQT +L KT              L TLSVLRDND +VEIELP+PDTLPTSAES  S+SS+  +   E   V        +   DV WLHA+FR
Subjt:  PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQ---EGQRVS-------LEEGDVRWLHAIFR

Query:  TELAGGLGGGV
         +  GG GGGV
Subjt:  TELAGGLGGGV

A0A5A7VIY9 Uncharacterized protein4.9e-1639.08Show/hide
Query:  IKGSREPRIYVVCVRGISGPIGWESRFHFFR--------------PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLP
        I+  REPRI      G          F F +              PRGNRSSLQT +L KT   +          L TLSVL DN+ +VEIELPVPDTLP
Subjt:  IKGSREPRIYVVCVRGISGPIGWESRFHFFR--------------PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLP

Query:  TSAESFRSSSSSTFQ--------------------------EGQRVSLEEGDVRWLHAIFRTELAGGLGGGVTK
        TSAESF S+SS+  +                          EG    +   DV WLH +FR ++AGG GGGVT+
Subjt:  TSAESFRSSSSSTFQ--------------------------EGQRVSLEEGDVRWLHAIFRTELAGGLGGGVTK

A0A5D3BAD1 Retrotrans_gag domain-containing protein2.8e-1957.41Show/hide
Query:  RFHFFRPRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQEGQRVSLEEGDVRWLHAIFRTELA
        + +  RPRGNR SLQT KL KT              L TLSVLRDND +VEIELPVPDTLPTSAESF S+S ST        +   DV WLHA+FR + A
Subjt:  RFHFFRPRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQEGQRVSLEEGDVRWLHAIFRTELA

Query:  GGLGGGVT
        GG GGGVT
Subjt:  GGLGGGVT

A0A5D3D150 Reverse transcriptase5.5e-1551.35Show/hide
Query:  PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQ---EGQRVS-------LEEGDVRWLHAIFR
        PRGNR SLQT +L KT              L TLSVLRDND +VEIELP+PDTLPTSAES  S+SS+  +   E   V        +   DV WLHA+FR
Subjt:  PRGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQ---EGQRVS-------LEEGDVRWLHAIFR

Query:  TELAGGLGGGV
         +  GG GGGV
Subjt:  TELAGGLGGGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTGCTGCCGTCGGTAGGGATGGTGGGTGGGTAGGTGAGCCGCGCCTTTTATACGCCTGCAAATGGGACAGCGTCGCGACGCTGACGTCACAGCATCATGACGC
TATGACGTCACCTGCTTGGGCGGCAAGACAACACAACATCGAGACGCTAAGGGACAACGTCTCGACGCTGTACTTCGGCAAGATCTTCCAGCTTGCGTTTTGGGCTGAAT
TTTGGGCTTCCTTTATAAAGGGTAGCAGAGAACCTCGAATTTATGTTGTCTGTGTTCGGGGAATTTCTGGACCAATAGGTTGGGAATCTCGTTTTCATTTCTTCAGGCCA
AGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACACCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCG
TGACAACGATGTTATCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTCAGATCAAGCTCCAGTTCAACGTTTCAGGAGGGTCAACGGG
TATCGTTAGAGGAGGGCGATGTTCGTTGGCTTCACGCCATCTTCCGGACTGAGTTAGCAGGTGGTCTGGGAGGGGGTGTGACAAAATATCCTAGGGACCAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTGCTGCCGTCGGTAGGGATGGTGGGTGGGTAGGTGAGCCGCGCCTTTTATACGCCTGCAAATGGGACAGCGTCGCGACGCTGACGTCACAGCATCATGACGC
TATGACGTCACCTGCTTGGGCGGCAAGACAACACAACATCGAGACGCTAAGGGACAACGTCTCGACGCTGTACTTCGGCAAGATCTTCCAGCTTGCGTTTTGGGCTGAAT
TTTGGGCTTCCTTTATAAAGGGTAGCAGAGAACCTCGAATTTATGTTGTCTGTGTTCGGGGAATTTCTGGACCAATAGGTTGGGAATCTCGTTTTCATTTCTTCAGGCCA
AGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACACCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCG
TGACAACGATGTTATCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTTCAGATCAAGCTCCAGTTCAACGTTTCAGGAGGGTCAACGGG
TATCGTTAGAGGAGGGCGATGTTCGTTGGCTTCACGCCATCTTCCGGACTGAGTTAGCAGGTGGTCTGGGAGGGGGTGTGACAAAATATCCTAGGGACCAAAATTAA
Protein sequenceShow/hide protein sequence
MAGAAVGRDGGWVGEPRLLYACKWDSVATLTSQHHDAMTSPAWAARQHNIETLRDNVSTLYFGKIFQLAFWAEFWASFIKGSREPRIYVVCVRGISGPIGWESRFHFFRP
RGNRSSLQTRKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDVIVEIELPVPDTLPTSAESFRSSSSSTFQEGQRVSLEEGDVRWLHAIFRTELAGGLGGGVTKYPRDQN