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Spg019167 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019167
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLysM domain-containing protein
Genome locationscaffold1:43065986..43068718
RNA-Seq ExpressionSpg019167
SyntenySpg019167
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576752.1 hypothetical protein SDJN03_24326, partial [Cucurbita argyrosperma subsp. sororia]2.3e-0543.75Show/hide
Query:  SRPLIDFVSWYSVVGLLGLILIGSIRE-SSSSAADDNNSQMLRAKYRSKPA------YPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE
        SR LID VSWY  + LLGLILIGSIRE SSSSA+ D+  QMLR    +  A        +   +H          +  +NPHIHD D+  P L ++
Subjt:  SRPLIDFVSWYSVVGLLGLILIGSIRE-SSSSAADDNNSQMLRAKYRSKPA------YPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE

KGN57357.2 hypothetical protein Csa_009741 [Cucumis sativus]4.0e-0541.84Show/hide
Query:  KSPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE
        +S SRPLID VSWY  VGLLGLILIGSIRE+SSS     + ++LR    + +P        +   +H          +  +NPHIHD D+  P L ++
Subjt:  KSPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE

XP_004150301.1 uncharacterized protein LOC101210054 [Cucumis sativus]4.0e-0541.84Show/hide
Query:  KSPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE
        +S SRPLID VSWY  VGLLGLILIGSIRE+SSS     + ++LR    + +P        +   +H          +  +NPHIHD D+  P L ++
Subjt:  KSPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE

XP_008439155.1 PREDICTED: uncharacterized protein LOC103484036 [Cucumis melo]6.2e-0644.33Show/hide
Query:  SPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE
        S SRPLID VSWY  VGLLGLILIGSIRE+SSS+ D   S  LR    + +P        +   +H          +  +NPHIHD D+  P L ++
Subjt:  SPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE

XP_022985106.1 uncharacterized protein LOC111483184 [Cucurbita maxima]5.6e-0744.21Show/hide
Query:  SRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRSKPA------YPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE
        SR LID VSWY  V +LGLILIGSIRE+SSSA+ D+ SQMLR    +  A        +   +H          +  +NPHIHD D+  P L ++
Subjt:  SRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRSKPA------YPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE

TrEMBL top hitse value%identityAlignment
A0A0A0L5R9 LysM domain-containing protein1.9e-0541.84Show/hide
Query:  KSPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE
        +S SRPLID VSWY  VGLLGLILIGSIRE+SSS     + ++LR    + +P        +   +H          +  +NPHIHD D+  P L ++
Subjt:  KSPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE

A0A1S3AXP2 uncharacterized protein LOC1034840363.0e-0644.33Show/hide
Query:  SPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE
        S SRPLID VSWY  VGLLGLILIGSIRE+SSS+ D   S  LR    + +P        +   +H          +  +NPHIHD D+  P L ++
Subjt:  SPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE

A0A5A7VAP9 Peptidoglycan-binding LysM domain-containing protein3.0e-0644.33Show/hide
Query:  SPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE
        S SRPLID VSWY  VGLLGLILIGSIRE+SSS+ D   S  LR    + +P        +   +H          +  +NPHIHD D+  P L ++
Subjt:  SPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRS-KP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE

A0A6J1DRZ3 uncharacterized protein LOC1110238412.8e-0437.25Show/hide
Query:  SRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAK-YRSKP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLETHRIS
        SRP  D VSWY  VG+L LILIGSIRES+ SA   ++ ++ R    R +P        +   +H          +  +NPHIHD D+  P L ++    S
Subjt:  SRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAK-YRSKP-----AYPKASKIH--------GRLCFQNPHIHDLDEESPRLKLETHRIS

Query:  RP
         P
Subjt:  RP

A0A6J1J769 uncharacterized protein LOC1114831842.7e-0744.21Show/hide
Query:  SRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRSKPA------YPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE
        SR LID VSWY  V +LGLILIGSIRE+SSSA+ D+ SQMLR    +  A        +   +H          +  +NPHIHD D+  P L ++
Subjt:  SRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRSKPA------YPKASKIH--------GRLCFQNPHIHDLDEESPRLKLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTCCCAAGGCAGCAACGCATTCAATGCTGCCTGGAGCACCTTCGCAGTCACGCTAACGTCTTTTTTTTTCAATCGGATCAATCGGTTCTCACCGTTTTAGAAGC
CTCGAAAATCCCCTTCCTCCATGTTCGTCTGTGTTTTCAGAAGCCTCGGAAATCCCCTTCCCGACCCCTAATCGATTTTGTTTCCTGGTACTCCGTCGTGGGCCTCCTGG
GCTTGATTTTGATCGGCTCCATCCGAGAAAGCTCCTCCTCCGCCGCCGACGACAACAACAGTCAGATGCTCAGAGCGAAATACAGATCAAAACCCGCATATCCAAAGGCC
TCGAAAATCCATGGGCGTCTCTGTTTTCAAAACCCACATATCCATGACTTGGACGAGGAATCGCCGAGATTAAAGCTCGAAACCCACCGCATATCAAGGCCTTTGGAGGG
AGCGGCGAAATCAATGGGAAGAACTACAACTCGAAACCCACCGAAAAACACAGATCGAAACCCACACCACTGGCTACAAAGCTCGAAACCCACACACGCTGCCCACACTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTCCCAAGGCAGCAACGCATTCAATGCTGCCTGGAGCACCTTCGCAGTCACGCTAACGTCTTTTTTTTTCAATCGGATCAATCGGTTCTCACCGTTTTAGAAGC
CTCGAAAATCCCCTTCCTCCATGTTCGTCTGTGTTTTCAGAAGCCTCGGAAATCCCCTTCCCGACCCCTAATCGATTTTGTTTCCTGGTACTCCGTCGTGGGCCTCCTGG
GCTTGATTTTGATCGGCTCCATCCGAGAAAGCTCCTCCTCCGCCGCCGACGACAACAACAGTCAGATGCTCAGAGCGAAATACAGATCAAAACCCGCATATCCAAAGGCC
TCGAAAATCCATGGGCGTCTCTGTTTTCAAAACCCACATATCCATGACTTGGACGAGGAATCGCCGAGATTAAAGCTCGAAACCCACCGCATATCAAGGCCTTTGGAGGG
AGCGGCGAAATCAATGGGAAGAACTACAACTCGAAACCCACCGAAAAACACAGATCGAAACCCACACCACTGGCTACAAAGCTCGAAACCCACACACGCTGCCCACACTT
GA
Protein sequenceShow/hide protein sequence
MVFPRQQRIQCCLEHLRSHANVFFFQSDQSVLTVLEASKIPFLHVRLCFQKPRKSPSRPLIDFVSWYSVVGLLGLILIGSIRESSSSAADDNNSQMLRAKYRSKPAYPKA
SKIHGRLCFQNPHIHDLDEESPRLKLETHRISRPLEGAAKSMGRTTTRNPPKNTDRNPHHWLQSSKPTHAAHT