; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019261 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019261
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin-conjugating enzyme
Genome locationscaffold1:44991081..44995684
RNA-Seq ExpressionSpg019261
SyntenySpg019261
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006281 - DNA repair (biological process)
GO:0016574 - histone ubiquitination (biological process)
GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005524 - ATP binding (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3966055.1 hypothetical protein CMV_009812 [Castanea mollissima]1.2e-3990.8Show/hide
Query:  LFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        +++R+VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPN
Subjt:  LFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

KAF4360876.1 hypothetical protein F8388_020029 [Cannabis sativa]1.6e-3989.36Show/hide
Query:  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL
        +VRMSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPNT IL SIQ  L
Subjt:  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL

KAF4391873.1 hypothetical protein G4B88_011516 [Cannabis sativa]1.6e-3989.36Show/hide
Query:  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL
        +VRMSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPNT IL SIQ  L
Subjt:  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL

KAG9459226.1 hypothetical protein H6P81_003734 [Aristolochia fimbriata]4.5e-3991.86Show/hide
Query:  FARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        F R VRMSTP+RKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPN
Subjt:  FARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

RYR17954.1 hypothetical protein Ahy_B03g062607 [Arachis hypogaea]9.2e-4080.95Show/hide
Query:  STLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSR
        S LD+  W++L   +R D+    VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSR
Subjt:  STLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSR

Query:  MFHPN
        MFHPN
Subjt:  MFHPN

TrEMBL top hitse value%identityAlignment
A0A0A0KVV8 UBC core domain-containing protein2.2e-3994.05Show/hide
Query:  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTA
        VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPNT+
Subjt:  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTA

A0A1D1ZJA7 Ubiquitin-conjugating enzyme E2 22.2e-3991.95Show/hide
Query:  LFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        L  R VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPN
Subjt:  LFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

A0A444ZV67 UBC core domain-containing protein4.4e-4080.95Show/hide
Query:  STLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSR
        S LD+  W++L   +R D+    VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSR
Subjt:  STLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSR

Query:  MFHPN
        MFHPN
Subjt:  MFHPN

A0A7J6ERE1 UBC core domain-containing protein7.6e-4089.36Show/hide
Query:  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL
        +VRMSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPNT IL SIQ  L
Subjt:  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL

A0A7J6H9A8 UBC core domain-containing protein7.6e-4089.36Show/hide
Query:  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL
        +VRMSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPNT IL SIQ  L
Subjt:  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL

SwissProt top hitse value%identityAlignment
P25865 Ubiquitin-conjugating enzyme E2 11.6e-3993.75Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+EDYPNKPPTVRFVSRMFHPN
Subjt:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

P25866 Ubiquitin-conjugating enzyme E2 28.1e-3992.5Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        MSTPARKRLMRDFKRLQQDPPAGISGAP +NNI LWNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPN
Subjt:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

P35130 Ubiquitin-conjugating enzyme E2 26.2e-3992.5Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        MSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+EDYPNKPPTVRFVSRMFHPN
Subjt:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

P42745 Ubiquitin-conjugating enzyme E2 21.6e-3993.75Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+EDYPNKPPTVRFVSRMFHPN
Subjt:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

P42746 Ubiquitin-conjugating enzyme E2 31.2e-3482.5Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        M+TPA+KRLM DFKRLQ+DPP GISGAPQ+NNIM WNA+IFG +DTPWDGGT KL L FTEDYPNKPP VRFVSRMFHPN
Subjt:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

Arabidopsis top hitse value%identityAlignment
AT1G08030.1 tyrosylprotein sulfotransferase7.8e-2136.41Show/hide
Query:  MSKRVRTKTNGVSTLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFG--ADDTPWDGGTSKLILQFTE
        MS R+R K+N +STLDIW WKYLVPWMR DLFAR       ARK  +++   ++ D P  +        +M  +  +    A D   +G T ++      
Subjt:  MSKRVRTKTNGVSTLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFG--ADDTPWDGGTSKLILQFTE

Query:  DYPNKPPTVRFVSRMFHP-NTAILISIQKRLDAMLYAGLTAKHKESATIFANVVGAQVISQLRDANLSMDTLADNQSVGVDVVSHGSTGKENDQD
         + ++   VR   + F     ++L   ++RLD+MLY GLT +H+ESA++FANVVG+QV+SQ+  +N +    A      V +   GS  K N Q+
Subjt:  DYPNKPPTVRFVSRMFHP-NTAILISIQKRLDAMLYAGLTAKHKESATIFANVVGAQVISQLRDANLSMDTLADNQSVGVDVVSHGSTGKENDQD

AT1G14400.1 ubiquitin carrier protein 11.2e-4093.75Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+EDYPNKPPTVRFVSRMFHPN
Subjt:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

AT1G14400.2 ubiquitin carrier protein 11.2e-4093.75Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+EDYPNKPPTVRFVSRMFHPN
Subjt:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

AT2G02760.1 ubiquiting-conjugating enzyme 21.2e-4093.75Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+EDYPNKPPTVRFVSRMFHPN
Subjt:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN

AT5G62540.1 ubiquitin-conjugating enzyme 38.6e-3682.5Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN
        M+TPA+KRLM DFKRLQ+DPP GISGAPQ+NNIM WNA+IFG +DTPWDGGT KL L FTEDYPNKPP VRFVSRMFHPN
Subjt:  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAACGTGTGCGCACAAAGACAAATGGAGTGAGCACACTGGATATTTGGTCGTGGAAGTATTTGGTTCCATGGATGAGGGGAGACCTATTTGCTCGATCGGTGAG
AATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTGCTGGCATTAGTGGTGCTCCCCAAAACAATAATATCATGCTATGGA
ATGCTGTTATATTTGGGGCAGATGATACACCTTGGGATGGAGGTACGTCTAAGCTGATCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTG
TCTAGAATGTTCCACCCTAATACAGCTATACTCATCTCTATTCAGAAGAGGTTGGATGCTATGTTATATGCTGGTCTAACTGCGAAACATAAGGAGTCTGCAACGATATT
TGCAAACGTGGTTGGTGCACAGGTGATTTCACAACTAAGAGATGCCAACTTGAGTATGGACACTTTAGCTGACAACCAATCAGTTGGAGTGGATGTTGTTTCTCATGGAT
CCACTGGAAAAGAAAATGATCAGGACTCCGTGTTTCGGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAACGTGTGCGCACAAAGACAAATGGAGTGAGCACACTGGATATTTGGTCGTGGAAGTATTTGGTTCCATGGATGAGGGGAGACCTATTTGCTCGATCGGTGAG
AATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTGCTGGCATTAGTGGTGCTCCCCAAAACAATAATATCATGCTATGGA
ATGCTGTTATATTTGGGGCAGATGATACACCTTGGGATGGAGGTACGTCTAAGCTGATCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTG
TCTAGAATGTTCCACCCTAATACAGCTATACTCATCTCTATTCAGAAGAGGTTGGATGCTATGTTATATGCTGGTCTAACTGCGAAACATAAGGAGTCTGCAACGATATT
TGCAAACGTGGTTGGTGCACAGGTGATTTCACAACTAAGAGATGCCAACTTGAGTATGGACACTTTAGCTGACAACCAATCAGTTGGAGTGGATGTTGTTTCTCATGGAT
CCACTGGAAAAGAAAATGATCAGGACTCCGTGTTTCGGTTGTAA
Protein sequenceShow/hide protein sequence
MSKRVRTKTNGVSTLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFV
SRMFHPNTAILISIQKRLDAMLYAGLTAKHKESATIFANVVGAQVISQLRDANLSMDTLADNQSVGVDVVSHGSTGKENDQDSVFRL