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Spg019282 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019282
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold1:44810927..44814065
RNA-Seq ExpressionSpg019282
SyntenySpg019282
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019198426.1 PREDICTED: uncharacterized protein LOC109192308 [Ipomoea nil]7.8e-1231.71Show/hide
Query:  GKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISAL---------------LSGEVAGKH----------
        G  LDEI+K LA+ + QFQ+ETR +IQ L +Q++Q+AT +SKLE ++S KLP+Q E+NPK N++A+               +  E  GK           
Subjt:  GKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISAL---------------LSGEVAGKH----------

Query:  -----------------------------------------------PFLEAMAQISSYTEFLKAWYQGKVKSSGKEEV--SENVCMLLSDDLPEKCIDL
                                                       P LEA+ QI  Y +FLK     K K   KE +   +NV  ++S+DLP+KC D 
Subjt:  -----------------------------------------------PFLEAMAQISSYTEFLKAWYQGKVKSSGKEEV--SENVCMLLSDDLPEKCIDL

Query:  DMFLL
         MF L
Subjt:  DMFLL

XP_021759483.1 uncharacterized protein LOC110724373 [Chenopodium quinoa]7.8e-1234.62Show/hide
Query:  LDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISA--LLSG---EVAGKH-----------------------
        L++I+KE+AD +L FQ+ETR+ ++NLE Q++Q+A  + KL+ ++S KLP+QPE NPK N SA  L SG   EV  K                        
Subjt:  LDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISA--LLSG---EVAGKH-----------------------

Query:  ------------------------PFLEAMAQISSYTEFLKAWYQGKVKSSGKEE--VSENVCMLLSDDLPEKCIDLDMFLL
                                P LEA+ Q+  Y +FLK     K + SG E+  VSENV  +L   +P KC D  +F +
Subjt:  ------------------------PFLEAMAQISSYTEFLKAWYQGKVKSSGKEE--VSENVCMLLSDDLPEKCIDLDMFLL

XP_022880391.1 uncharacterized protein LOC111397619 [Olea europaea var. sylvestris]7.1e-1338.82Show/hide
Query:  TGTKGKFLDEIIKELADCSLQFQKETRN-------TIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISALLSGEVAGKH--------PFLEAM
        T + G  L+ I+K LA   LQFQ+ET+        +I++LE+QM QMAT I++LE + S KLP+Q  +NP+ N+SA+LS   +GK         P L+A+
Subjt:  TGTKGKFLDEIIKELADCSLQFQKETRN-------TIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISALLSGEVAGKH--------PFLEAM

Query:  AQISSYTEFLKAW----YQGKVKSSGKEEVSENVCMLLSDDLPEKCIDLDMF
         Q+  Y +FLK       + K++   K  V EN+  ++  +LP KC D  MF
Subjt:  AQISSYTEFLKAW----YQGKVKSSGKEEVSENVCMLLSDDLPEKCIDLDMF

XP_023897733.1 uncharacterized protein LOC112009631 [Quercus suber]5.8e-1539.26Show/hide
Query:  PLEAMLGTTGTKGKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISALL--SG---EVAGK---------
        P     G T   G  L++I+K  A  +LQFQ+E R  IQ+L++QM QMAT IS+LE +SS KLP+Q  +NP+ N SA++  SG   E+  K         
Subjt:  PLEAMLGTTGTKGKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISALL--SG---EVAGK---------

Query:  --HPFLEAMAQISSYTEFLKAW----YQGKVKSSGKEEVSENVCMLLSDDLPEKCIDLDMFLL
           P L+A+ Q++ Y +FLK       + K+K   K  V ENV +++   LP KC D  MF +
Subjt:  --HPFLEAMAQISSYTEFLKAW----YQGKVKSSGKEEVSENVCMLLSDDLPEKCIDLDMFLL

XP_031127553.1 uncharacterized protein LOC116029647 [Ipomoea triloba]1.2e-1232.68Show/hide
Query:  GKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISAL----------------------------------
        G  LDEI+K LA+ + QFQ+ETR  IQ L +Q++Q+AT +SKLE ++SRKLP+Q E+NPK N+SA+                                  
Subjt:  GKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISAL----------------------------------

Query:  -----------------------LSGEVAGKH---------------PFLEAMAQISSYTEFLKAWYQGKVKSSGKEEV--SENVCMLLSDDLPEKCIDL
                               LS     +H               P LEA+ QI  Y +FLK     K K   KE++   +NV  ++S+DLP KC D 
Subjt:  -----------------------LSGEVAGKH---------------PFLEAMAQISSYTEFLKAWYQGKVKSSGKEEV--SENVCMLLSDDLPEKCIDL

Query:  DMFLL
         MF L
Subjt:  DMFLL

TrEMBL top hitse value%identityAlignment
A0A1U7ZAQ0 uncharacterized protein LOC1045881501.8e-0950.7Show/hide
Query:  TTGTKGKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISAL
        ++   G  LDEI+KELA  + QFQ+ETR  IQNLE+Q++Q+AT +S++E++ S +LP+Q  +NPK N+SA+
Subjt:  TTGTKGKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISAL

A0A1U7ZEK1 uncharacterized protein LOC1045893131.6e-1055.71Show/hide
Query:  GKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISALLSGE
        G  LDEI+K LA  + QFQ+ETR +IQNLE+Q++Q+AT +S+LE++ SRKLP+Q  +NPK N S L +G+
Subjt:  GKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISALLSGE

A0A6I9UR30 uncharacterized protein LOC1051802471.4e-1134.01Show/hide
Query:  GKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISAL-------LSGEVAGKH------------------
        G  L++I+K LA  + QFQ+ETR++IQNLESQM+Q+A+ +S+LE  S  K P+QP INPK N SA+       L  E++ KH                  
Subjt:  GKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISAL-------LSGEVAGKH------------------

Query:  -----------------------------------------PFLEAMAQISSYTEFLKAWYQGKVKSSGKEEVS--ENVCMLLSDDLPEKCIDLDMF
                                                 P L+A+ QI  Y +FLK     K K  G E VS  ENV  +L   LP KC D  MF
Subjt:  -----------------------------------------PFLEAMAQISSYTEFLKAWYQGKVKSSGKEEVS--ENVCMLLSDDLPEKCIDLDMF

A0A6J1DRS5 uncharacterized protein LOC1110232483.5e-1035.59Show/hide
Query:  PLEAMLGTTGTKGKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKAN----ISAL------------------
        P   M       G  L+EI+K LA+ +LQFQ+ETR  +QNL +Q+TQ+AT +S+LE +SS  LP+Q E+NPK N    ISA+                  
Subjt:  PLEAMLGTTGTKGKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKAN----ISAL------------------

Query:  -LSGEVAGKHPFL------EAMAQISSYTE---FLKAWYQGKVKSSGKE--EVSENVCMLLSDDLPEKCIDLDMFLL
         LS E     P +      +    +SSYT    F   + + K K +  E  EV + +  ++ ++LPEKC D  MF L
Subjt:  -LSGEVAGKHPFL------EAMAQISSYTE---FLKAWYQGKVKSSGKE--EVSENVCMLLSDDLPEKCIDLDMFLL

A0A6P6W3P0 uncharacterized protein LOC1137290201.4e-1137.87Show/hide
Query:  LEAMLGTTGTKGKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISA--LLSG-EVAG-------------
        LE ++ +  T    L +  + L   + QFQ+ET+  I+NLE+Q++ MAT I++LE++   KLP+QPE NPK N+SA  L SG EV G             
Subjt:  LEAMLGTTGTKGKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISA--LLSG-EVAG-------------

Query:  ---------KHPFLEAMAQISSYTEFLKAWYQGKVKSSGKEEVS--ENVCMLLSDDLPEKCIDLDMFLL
                   P LEA+ Q+  Y +FLK  Y  K K  G E V+  ENV  +L   L  KC D D+F +
Subjt:  ---------KHPFLEAMAQISSYTEFLKAWYQGKVKSSGKEEVS--ENVCMLLSDDLPEKCIDLDMFLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTGGAGGCTATGCTGGGAACAACGGGAACCAAAGGTAAGTTTTTAGATGAGATTATTAAGGAGCTTGCTGATTGTTCTTTGCAGTTCCAAAAGGAAACCAGGAA
CACAATTCAAAACCTTGAGAGTCAGATGACTCAGATGGCCACGAAGATCAGCAAGTTGGAAAATAGAAGCTCAAGAAAACTCCCTGCGCAACCAGAGATCAATCCTAAGG
CGAACATCAGTGCCTTATTGAGTGGAGAAGTTGCAGGGAAACATCCATTTCTTGAGGCGATGGCACAAATTTCATCCTATACGGAGTTTCTAAAGGCTTGGTATCAAGGT
AAGGTTAAGTCCTCGGGCAAGGAGGAGGTAAGTGAGAATGTATGTATGTTACTTTCTGATGATCTTCCTGAAAAATGCATAGATCTTGACATGTTTTTACTTCTGACCCC
AGTTTGTGATGGTGATGTGTATGATGTAGTTGACAAACACCATGTTTCTATAACTGTAAAATCCGCTGGTGTGACTGTTTGTTCGTCTTCTAAGGTCAGGGCTGATAGTG
TTGTTTGCCAGTCCTCTGTTTCTTCTGACTTTTCTTTGCAGCGGCTTGAAAAGACAGACCCAAATGCCATCAAACTTGAGCTTCAGTTCAGGGGACGAGTCCTTGGTGCC
AGTGTAGAGAGAATACAGAATGAGAGCTTGGAATTTGAGCACAAGAGGACAATTAAGCCATTATGTCAATTCGGCGCTGACTCGGGAGTTTTAGGATGTTTTCGAGCTAA
TTTGGAGTCCCCGAGACGACGTGGAGCCAAAGGACTTGACCGGAGCGCTTGGTCCTCGTCATTGGAGCCAAAAGGATCGAACAAGCAATTGAGCAAATTGGGAAAACCCG
AGAGCAAGCGTCTCGATGCTCCTCGATTTCATCCCTCAGACGAAAGGGCCAGCGTCGATAATAATAAATATGTTTCTTTTCGTCTTTTTAGCCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATTGGAGGCTATGCTGGGAACAACGGGAACCAAAGGTAAGTTTTTAGATGAGATTATTAAGGAGCTTGCTGATTGTTCTTTGCAGTTCCAAAAGGAAACCAGGAA
CACAATTCAAAACCTTGAGAGTCAGATGACTCAGATGGCCACGAAGATCAGCAAGTTGGAAAATAGAAGCTCAAGAAAACTCCCTGCGCAACCAGAGATCAATCCTAAGG
CGAACATCAGTGCCTTATTGAGTGGAGAAGTTGCAGGGAAACATCCATTTCTTGAGGCGATGGCACAAATTTCATCCTATACGGAGTTTCTAAAGGCTTGGTATCAAGGT
AAGGTTAAGTCCTCGGGCAAGGAGGAGGTAAGTGAGAATGTATGTATGTTACTTTCTGATGATCTTCCTGAAAAATGCATAGATCTTGACATGTTTTTACTTCTGACCCC
AGTTTGTGATGGTGATGTGTATGATGTAGTTGACAAACACCATGTTTCTATAACTGTAAAATCCGCTGGTGTGACTGTTTGTTCGTCTTCTAAGGTCAGGGCTGATAGTG
TTGTTTGCCAGTCCTCTGTTTCTTCTGACTTTTCTTTGCAGCGGCTTGAAAAGACAGACCCAAATGCCATCAAACTTGAGCTTCAGTTCAGGGGACGAGTCCTTGGTGCC
AGTGTAGAGAGAATACAGAATGAGAGCTTGGAATTTGAGCACAAGAGGACAATTAAGCCATTATGTCAATTCGGCGCTGACTCGGGAGTTTTAGGATGTTTTCGAGCTAA
TTTGGAGTCCCCGAGACGACGTGGAGCCAAAGGACTTGACCGGAGCGCTTGGTCCTCGTCATTGGAGCCAAAAGGATCGAACAAGCAATTGAGCAAATTGGGAAAACCCG
AGAGCAAGCGTCTCGATGCTCCTCGATTTCATCCCTCAGACGAAAGGGCCAGCGTCGATAATAATAAATATGTTTCTTTTCGTCTTTTTAGCCGCTAG
Protein sequenceShow/hide protein sequence
MPLEAMLGTTGTKGKFLDEIIKELADCSLQFQKETRNTIQNLESQMTQMATKISKLENRSSRKLPAQPEINPKANISALLSGEVAGKHPFLEAMAQISSYTEFLKAWYQG
KVKSSGKEEVSENVCMLLSDDLPEKCIDLDMFLLLTPVCDGDVYDVVDKHHVSITVKSAGVTVCSSSKVRADSVVCQSSVSSDFSLQRLEKTDPNAIKLELQFRGRVLGA
SVERIQNESLEFEHKRTIKPLCQFGADSGVLGCFRANLESPRRRGAKGLDRSAWSSSLEPKGSNKQLSKLGKPESKRLDAPRFHPSDERASVDNNKYVSFRLFSR