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Spg019310 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019310
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-Pol polyprotein
Genome locationscaffold1:50295115..50297238
RNA-Seq ExpressionSpg019310
SyntenySpg019310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.1e-1029.8Show/hide
Query:  PEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGL---REESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKEALKLVANKG------
        P F++R+I Q+ W+ FC HP   +VPLVREFY  L    +E++ +    V F++  IN ++ ++  +     D     + +Q++  L  VA +G      
Subjt:  PEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGL---REESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKEALKLVANKG------

Query:  ------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILAC--GRKRAVSRGKTKPQHLRSLHLKTYWAYAKE
                                 R MP+TH  T++ +RV+LLY I+ G+ +N+  I   EI AC   RKR    G   P  +  L LK    Y K+
Subjt:  ------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILAC--GRKRAVSRGKTKPQHLRSLHLKTYWAYAKE

KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]2.4e-1028.35Show/hide
Query:  KNPFPEVFKDFNFQERMRIMRKKDFLNEKGF---SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLREESISI--------VSFSSVDIN
        KN F E+ K    ++ +  +R K+F  ++G         ++P ++   I +  W   C  P   V  +V+EFY       +          V FS  DIN
Subjt:  KNPFPEVFKDFNFQERMRIMRKKDFLNEKGF---SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLREESISI--------VSFSSVDIN

Query:  RVYRIKAPLHPRGNDV------------IRNPSTKQMKEALKLVAN-KGNRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRK
          Y +K        DV            +       +K+ +K + N   + L+PT+HDST+S ER+ +LYCI+KG ++NVG +I  EI  C  +
Subjt:  RVYRIKAPLHPRGNDV------------IRNPSTKQMKEALKLVAN-KGNRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRK

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.1e-1231.35Show/hide
Query:  EKGF----SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLR---EESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKE
        EKGF    S     LP F++++I+Q+ W+ FCAHP++ +VPLVREFY  L    E ++ +    VS+S   IN V+ +  P+    ++ I N +   +  
Subjt:  EKGF----SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLR---EESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKE

Query:  ALKLVANKG------------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKR
         L+ VA  G                              + L+PTTH  T+S +R++LL+ ++ G  +NVG +I  EI AC  ++
Subjt:  ALKLVANKG------------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKR

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.9e-1431.89Show/hide
Query:  EKGF----SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGL---REESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKE
        EKGF    S     LP F++++I+Q+ W+ FCAHP++ +VPLVREFY  L    E ++ +    VS+S   IN V+ +  P+    ++ I+N + + +  
Subjt:  EKGF----SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGL---REESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKE

Query:  ALKLVANKG------------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKR
         L+ VA  G                              +RL+PTTH  T+S +R++LL+ ++ G  +NVG +I  EI AC  ++
Subjt:  ALKLVANKG------------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKR

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]2.5e-1231.18Show/hide
Query:  PEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLR---EESISI----VSFSSVDINRVYRIKAPL--HPRGNDVIRNPSTKQMKEALKLVANKGN---
        P F++ +I Q+ WQ FCAHP++ +VPLVREFY  +    ++++ I    V  S   IN ++ +  P+  H    + I  P    + E + +V  + N   
Subjt:  PEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLR---EESISI----VSFSSVDINRVYRIKAPL--HPRGNDVIRNPSTKQMKEALKLVANKGN---

Query:  ------------------------RLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKRA
                                RL+PTTH  T+S E V LLY ++ G  +NVG +I  EI AC  +++
Subjt:  ------------------------RLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKRA

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.5e-1331.35Show/hide
Query:  EKGF----SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLR---EESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKE
        EKGF    S     LP F++++I+Q+ W+ FCAHP++ +VPLVREFY  L    E ++ +    VS+S   IN V+ +  P+    ++ I N +   +  
Subjt:  EKGF----SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLR---EESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKE

Query:  ALKLVANKG------------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKR
         L+ VA  G                              + L+PTTH  T+S +R++LL+ ++ G  +NVG +I  EI AC  ++
Subjt:  ALKLVANKG------------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKR

A0A2P5BCG4 Uncharacterized protein (Fragment)3.8e-1431.89Show/hide
Query:  EKGF----SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGL---REESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKE
        EKGF    S     LP F++++I+Q+ W+ FCAHP++ +VPLVREFY  L    E ++ +    VS+S   IN V+ +  P+    ++ I+N + + +  
Subjt:  EKGF----SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGL---REESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKE

Query:  ALKLVANKG------------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKR
         L+ VA  G                              +RL+PTTH  T+S +R++LL+ ++ G  +NVG +I  EI AC  ++
Subjt:  ALKLVANKG------------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKR

A0A2P5DAQ2 Uncharacterized protein1.2e-1231.18Show/hide
Query:  PEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLR---EESISI----VSFSSVDINRVYRIKAPL--HPRGNDVIRNPSTKQMKEALKLVANKGN---
        P F++ +I Q+ WQ FCAHP++ +VPLVREFY  +    ++++ I    V  S   IN ++ +  P+  H    + I  P    + E + +V  + N   
Subjt:  PEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLR---EESISI----VSFSSVDINRVYRIKAPL--HPRGNDVIRNPSTKQMKEALKLVANKGN---

Query:  ------------------------RLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKRA
                                RL+PTTH  T+S E V LLY ++ G  +NVG +I  EI AC  +++
Subjt:  ------------------------RLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRKRA

A0A7J6FZ22 Uncharacterized protein1.2e-1028.35Show/hide
Query:  KNPFPEVFKDFNFQERMRIMRKKDFLNEKGF---SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLREESISI--------VSFSSVDIN
        KN F E+ K    ++ +  +R K+F  ++G         ++P ++   I +  W   C  P   V  +V+EFY       +          V FS  DIN
Subjt:  KNPFPEVFKDFNFQERMRIMRKKDFLNEKGF---SNRARALPEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGLREESISI--------VSFSSVDIN

Query:  RVYRIKAPLHPRGNDV------------IRNPSTKQMKEALKLVAN-KGNRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRK
          Y +K        DV            +       +K+ +K + N   + L+PT+HDST+S ER+ +LYCI+KG ++NVG +I  EI  C  +
Subjt:  RVYRIKAPLHPRGNDV------------IRNPSTKQMKEALKLVAN-KGNRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGRK

W9QTD9 Uncharacterized protein5.2e-1129.8Show/hide
Query:  PEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGL---REESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKEALKLVANKG------
        P F++R+I Q+ W+ FC HP   +VPLVREFY  L    +E++ +    V F++  IN ++ ++  +     D     + +Q++  L  VA +G      
Subjt:  PEFVSRIISQYKWQDFCAHPQEVVVPLVREFYVGL---REESISI----VSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKEALKLVANKG------

Query:  ------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILAC--GRKRAVSRGKTKPQHLRSLHLKTYWAYAKE
                                 R MP+TH  T++ +RV+LLY I+ G+ +N+  I   EI AC   RKR    G   P  +  L LK    Y K+
Subjt:  ------------------------NRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILAC--GRKRAVSRGKTKPQHLRSLHLKTYWAYAKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCAGACGATGAGAGCTCAGAGACGTGTTGCCCTTAAAGAAGAAGCTACTCGGCAAGAGGGAACTTTATCTGGTAAGCTATCTGAACCGTCAATTAACCCCTCTTC
ATCTTGCAGGGCCAAACCCTTTGTTACCTATAGTGCAAGGAAAAGGAGTCCTAAGAAAATTTTGCCTGAAAAGCCGCTTGTAATCGAGCCACTTAAAACCGCGAGAATGC
CTCCAAACGTGTTCGAAGATATAATCCACCGAGCCGTGGCAAAGGCTCTCGTGATTGTTGAAGGATACAGGGCTGAACAAGATGCTTTGAAAGATATTGAAGCTGAGAGA
GAGATGGAAAATCAACACATGATGTGGAGGAAGATGATTTTGCAAAGAGAAGAGATGAGGAAGAGAGCGAAGAGAAAAGAAGGAGAAAAGAAGAAAGGCCTAGCCAAGGC
CATTGAAGCTAAGCCTGCTGATGAGGTTTTCGAACCTCTATTCAAGTATGACCCACCAGCAGCTGACAACACCTCTTTGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAA
GCAAGGAGGCCAAAACCTCTAGTGACTCTGAATCAGAATCAGACTCAAAGATTAATGAATTTGATGATGACCAAGTTCCTATCTCTGTAGCATTGAGGAGAAAGAGAAAA
AGAGAGATCAAAGTTGAAAGGAGGACCAAAAATAAAAATGACCCGATATTTGCCAAGAGGCCGAGGACAAGGTCGATGGACGCCTCTCCTGCAATTCCTCCTACTGTCTC
ACTGGCCAAGCCAAAGGGCAAATCACCGAAAGCTCCATCTCCCAAAAATCCATTTCCTGAGGTATTCAAAGATTTCAATTTTCAGGAGAGGATGAGGATAATGAGAAAGA
AAGATTTCCTCAATGAGAAGGGATTCTCTAATAGAGCAAGAGCACTGCCAGAGTTCGTGAGTAGAATCATTTCGCAGTACAAATGGCAGGACTTTTGTGCTCATCCTCAA
GAGGTTGTAGTGCCTTTAGTTCGAGAGTTTTACGTCGGCCTGAGGGAGGAGAGCATTAGTATCGTCAGCTTCTCTTCAGTGGACATCAACAGGGTGTACAGGATCAAGGC
ACCACTACATCCAAGAGGGAATGATGTGATAAGGAACCCTTCAACCAAACAAATGAAGGAAGCTCTAAAACTTGTGGCCAACAAGGGAAACCGTTTGATGCCAACCACCC
ACGATAGCACGATCTCAGTAGAGAGAGTTATGCTTCTCTACTGCATTATGAAGGGGTTGGAAATGAACGTGGGGAACATAATCAGAGATGAAATTCTAGCCTGTGGAAGG
AAACGAGCAGTATCCAGAGGAAAGACAAAGCCTCAACATCTCAGGTCACTCCACCTGAAGACGTATTGGGCATATGCAAAGGAGAGGGATAAGGCCATTAGAGAGTTCTA
TCTCTCTACTGCCCCAAGTATCGCTTCAATCTTTCCCGATTTCCCTCAGTCGCTGCTGCCTCAAGAAAACAAGGATTCTGATGAAAATGATGATGAGAATGATGATGAAG
ATGATGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCCAGACGATGAGAGCTCAGAGACGTGTTGCCCTTAAAGAAGAAGCTACTCGGCAAGAGGGAACTTTATCTGGTAAGCTATCTGAACCGTCAATTAACCCCTCTTC
ATCTTGCAGGGCCAAACCCTTTGTTACCTATAGTGCAAGGAAAAGGAGTCCTAAGAAAATTTTGCCTGAAAAGCCGCTTGTAATCGAGCCACTTAAAACCGCGAGAATGC
CTCCAAACGTGTTCGAAGATATAATCCACCGAGCCGTGGCAAAGGCTCTCGTGATTGTTGAAGGATACAGGGCTGAACAAGATGCTTTGAAAGATATTGAAGCTGAGAGA
GAGATGGAAAATCAACACATGATGTGGAGGAAGATGATTTTGCAAAGAGAAGAGATGAGGAAGAGAGCGAAGAGAAAAGAAGGAGAAAAGAAGAAAGGCCTAGCCAAGGC
CATTGAAGCTAAGCCTGCTGATGAGGTTTTCGAACCTCTATTCAAGTATGACCCACCAGCAGCTGACAACACCTCTTTGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAA
GCAAGGAGGCCAAAACCTCTAGTGACTCTGAATCAGAATCAGACTCAAAGATTAATGAATTTGATGATGACCAAGTTCCTATCTCTGTAGCATTGAGGAGAAAGAGAAAA
AGAGAGATCAAAGTTGAAAGGAGGACCAAAAATAAAAATGACCCGATATTTGCCAAGAGGCCGAGGACAAGGTCGATGGACGCCTCTCCTGCAATTCCTCCTACTGTCTC
ACTGGCCAAGCCAAAGGGCAAATCACCGAAAGCTCCATCTCCCAAAAATCCATTTCCTGAGGTATTCAAAGATTTCAATTTTCAGGAGAGGATGAGGATAATGAGAAAGA
AAGATTTCCTCAATGAGAAGGGATTCTCTAATAGAGCAAGAGCACTGCCAGAGTTCGTGAGTAGAATCATTTCGCAGTACAAATGGCAGGACTTTTGTGCTCATCCTCAA
GAGGTTGTAGTGCCTTTAGTTCGAGAGTTTTACGTCGGCCTGAGGGAGGAGAGCATTAGTATCGTCAGCTTCTCTTCAGTGGACATCAACAGGGTGTACAGGATCAAGGC
ACCACTACATCCAAGAGGGAATGATGTGATAAGGAACCCTTCAACCAAACAAATGAAGGAAGCTCTAAAACTTGTGGCCAACAAGGGAAACCGTTTGATGCCAACCACCC
ACGATAGCACGATCTCAGTAGAGAGAGTTATGCTTCTCTACTGCATTATGAAGGGGTTGGAAATGAACGTGGGGAACATAATCAGAGATGAAATTCTAGCCTGTGGAAGG
AAACGAGCAGTATCCAGAGGAAAGACAAAGCCTCAACATCTCAGGTCACTCCACCTGAAGACGTATTGGGCATATGCAAAGGAGAGGGATAAGGCCATTAGAGAGTTCTA
TCTCTCTACTGCCCCAAGTATCGCTTCAATCTTTCCCGATTTCCCTCAGTCGCTGCTGCCTCAAGAAAACAAGGATTCTGATGAAAATGATGATGAGAATGATGATGAAG
ATGATGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG
Protein sequenceShow/hide protein sequence
MIQTMRAQRRVALKEEATRQEGTLSGKLSEPSINPSSSCRAKPFVTYSARKRSPKKILPEKPLVIEPLKTARMPPNVFEDIIHRAVAKALVIVEGYRAEQDALKDIEAER
EMENQHMMWRKMILQREEMRKRAKRKEGEKKKGLAKAIEAKPADEVFEPLFKYDPPAADNTSLGEKRDEEEKESKEAKTSSDSESESDSKINEFDDDQVPISVALRRKRK
REIKVERRTKNKNDPIFAKRPRTRSMDASPAIPPTVSLAKPKGKSPKAPSPKNPFPEVFKDFNFQERMRIMRKKDFLNEKGFSNRARALPEFVSRIISQYKWQDFCAHPQ
EVVVPLVREFYVGLREESISIVSFSSVDINRVYRIKAPLHPRGNDVIRNPSTKQMKEALKLVANKGNRLMPTTHDSTISVERVMLLYCIMKGLEMNVGNIIRDEILACGR
KRAVSRGKTKPQHLRSLHLKTYWAYAKERDKAIREFYLSTAPSIASIFPDFPQSLLPQENKDSDENDDENDDEDDEEKESSSDED