; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019360 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019360
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold1:49536956..49541529
RNA-Seq ExpressionSpg019360
SyntenySpg019360
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032939.1 hypothetical protein E6C27_scaffold269G00120 [Cucumis melo var. makuwa]2.6e-1770.89Show/hide
Query:  ERSCPTSSS-SAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE
        +R+ P+SSS SAP PMS DQYAMDL FT VTRSR+R+  IR  SP ESSTPPRPSANL+RPSG VVQ+RPP SP  N E
Subjt:  ERSCPTSSS-SAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]5.8e-1759Show/hide
Query:  SAKDGASLGVTDRPPPSGLEKGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE
        S+  G++ G T+    S   KG R  P+SS+SAP P+S DQYAMDLGFT VTR  +R+ GI   SP ESSTPPRPS NL+RPS GVVQ+RPP SP  N E
Subjt:  SAKDGASLGVTDRPPPSGLEKGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]1.2e-1769.23Show/hide
Query:  KGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQN
        KG R   +SS+S P PMS DQYAMDLGFT VTRSR+R+  IR  SP ESSTPP+PS NL+RPSGGVVQ+R PVSP  N
Subjt:  KGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQN

KAA0067933.1 hypothetical protein E6C27_scaffold138G001030 [Cucumis melo var. makuwa]3.4e-1768.83Show/hide
Query:  SCP-TSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE
        +CP +SS+SAP PMS +QYAMDLGFT VTRSR+R+  I+  SP ESSTPPRPSANL+  SGGVVQ+RPPV+P  N E
Subjt:  SCP-TSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]3.4e-1759Show/hide
Query:  SAKDGASLGVTDRPPPSGLEKGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE
        S++ G+  G T+    S   KG R   +SS+SAP PMS DQY MDLGFT V RSR+R+  IR  SP ESSTPPRP ANL+RPSG VVQ+RPP SP  N E
Subjt:  SAKDGASLGVTDRPPPSGLEKGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein2.8e-1759Show/hide
Query:  SAKDGASLGVTDRPPPSGLEKGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE
        S+  G++ G T+    S   KG R  P+SS+SAP P+S DQYAMDLGFT VTR  +R+ GI   SP ESSTPPRPS NL+RPS GVVQ+RPP SP  N E
Subjt:  SAKDGASLGVTDRPPPSGLEKGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE

A0A5A7U8A0 Uncharacterized protein5.7e-1869.23Show/hide
Query:  KGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQN
        KG R   +SS+S P PMS DQYAMDLGFT VTRSR+R+  IR  SP ESSTPP+PS NL+RPSGGVVQ+R PVSP  N
Subjt:  KGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQN

A0A5A7VIK7 Uncharacterized protein1.7e-1768.83Show/hide
Query:  SCP-TSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE
        +CP +SS+SAP PMS +QYAMDLGFT VTRSR+R+  I+  SP ESSTPPRPSANL+  SGGVVQ+RPPV+P  N E
Subjt:  SCP-TSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE

A0A5D3CKX1 Uncharacterized protein1.7e-1759Show/hide
Query:  SAKDGASLGVTDRPPPSGLEKGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE
        S++ G+  G T+    S   KG R   +SS+SAP PMS DQY MDLGFT V RSR+R+  IR  SP ESSTPPRP ANL+RPSG VVQ+RPP SP  N E
Subjt:  SAKDGASLGVTDRPPPSGLEKGERSCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE

A0A5D3DEK9 Uncharacterized protein1.3e-1770.89Show/hide
Query:  ERSCPTSSS-SAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE
        +R+ P+SSS SAP PMS DQYAMDL FT VTRSR+R+  IR  SP ESSTPPRPSANL+RPSG VVQ+RPP SP  N E
Subjt:  ERSCPTSSS-SAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACCAACTCACTGGAGGTGCCCAAGTGGGAATCGTGGGAGATCTCTACTCCTACTGATGGTAGAAGGCACCCAAGTACAGAGAGAGAGGATATCTGGTGCCCTAT
TCAGTATGAACGTTTGCCAGATTTCTGTTATGGTTGTGGGTGTCTCTGTCATATAGTCCGTGAATGTGTAGGGTCGTCCTCTGGTTCAGGGTCTGAGCTTCGTATGGAAT
ACGGTGACTGGTTGAGGGCAGAATCTGTGTCTATAGCTAGTGCGAAGGATGGAGCAAGTTTGGGTGTGACTGATCGGCCGCCTCCTTCTGGTCTGGAAAAGGGTGAAAGA
TCCTGCCCAACTTCCTCTTCTTCAGCACCTCCACCTATGAGTGTTGATCAATACGCTATGGATCTAGGGTTTACTCCGGTAACCCGATCTAGAGCAAGAACGGGCGGCAT
ACGTCCGATGTCTCCAATGGAGTCATCCACTCCACCAAGGCCTTCGGCCAACCTAGTTCGTCCTTCTGGCGGTGTTGTTCAATTGAGACCTCCAGTCTCACCAATCCAAA
ATATTGAGCTAAGGAGGATTGATCAAATCCAAGAGCAAATATTGAAAATTCAAAATCTAGAGCTAAAGAGGATGAGACAAGATATTGCCAACATCCAAAGTAACGAAAAT
TTGAAGAAGTCCATTGAAGATCCAAGTTCAAAAGCCCAAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTACCAACTCACTGGAGGTGCCCAAGTGGGAATCGTGGGAGATCTCTACTCCTACTGATGGTAGAAGGCACCCAAGTACAGAGAGAGAGGATATCTGGTGCCCTAT
TCAGTATGAACGTTTGCCAGATTTCTGTTATGGTTGTGGGTGTCTCTGTCATATAGTCCGTGAATGTGTAGGGTCGTCCTCTGGTTCAGGGTCTGAGCTTCGTATGGAAT
ACGGTGACTGGTTGAGGGCAGAATCTGTGTCTATAGCTAGTGCGAAGGATGGAGCAAGTTTGGGTGTGACTGATCGGCCGCCTCCTTCTGGTCTGGAAAAGGGTGAAAGA
TCCTGCCCAACTTCCTCTTCTTCAGCACCTCCACCTATGAGTGTTGATCAATACGCTATGGATCTAGGGTTTACTCCGGTAACCCGATCTAGAGCAAGAACGGGCGGCAT
ACGTCCGATGTCTCCAATGGAGTCATCCACTCCACCAAGGCCTTCGGCCAACCTAGTTCGTCCTTCTGGCGGTGTTGTTCAATTGAGACCTCCAGTCTCACCAATCCAAA
ATATTGAGCTAAGGAGGATTGATCAAATCCAAGAGCAAATATTGAAAATTCAAAATCTAGAGCTAAAGAGGATGAGACAAGATATTGCCAACATCCAAAGTAACGAAAAT
TTGAAGAAGTCCATTGAAGATCCAAGTTCAAAAGCCCAAGAAGAATGA
Protein sequenceShow/hide protein sequence
MLTNSLEVPKWESWEISTPTDGRRHPSTEREDIWCPIQYERLPDFCYGCGCLCHIVRECVGSSSGSGSELRMEYGDWLRAESVSIASAKDGASLGVTDRPPPSGLEKGER
SCPTSSSSAPPPMSVDQYAMDLGFTPVTRSRARTGGIRPMSPMESSTPPRPSANLVRPSGGVVQLRPPVSPIQNIELRRIDQIQEQILKIQNLELKRMRQDIANIQSNEN
LKKSIEDPSSKAQEE