| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-94 | 74.15 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
L VGTG+ ISA+AVGD K+FF + M L+N+YIV KIKRNL+S+SCL+E YS++FS+NE FI K G IC AKLENNLYVLRP E++A+LN+EMF+TA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KRQ++S +TYLWHLRLG INL+RIGRLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGK YRAKEPLEL+H+DL GPMNV+ARGG+EYFISFI
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
DDYSRYGYLYLM HKSEALEKFKEYK EVENLL ++
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 2.4e-93 | 73.31 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
L VGTG+ ISA+AVGD K+FF + M L+N+YIV KIKRNL+S+SCL+E YS++FS+NE FI K G IC AKLENNLYVLRP E++A+LN+EMF+TA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KRQ++S +TYLWHLRLG INL+RIGRLVK+GLL++L+D +LPPCESCLEGKMTKRPFTGK YRAKEPLEL+H+DL GPMNV+ARG +EYFISFI
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
DDYSRYGYLYLM HKSEALEKFKEYK EVENLL ++
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa] | 2.4e-85 | 68.51 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
+ VGTG +SA AVG ++++ + +LL+NVY+V +KRNLIS+ CLLEQ YS++F+VN+ FI K G +IC AKLENNLYVLR + S+A+LN EMFKTA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KR K+S ++ +LWHLRLG INLNRI RLVKNGLLS+LE+ +LP CESCLEGKMTKRPFTGK +RAKEPLELVH++L GPMNV+ARGG+EYFI+F
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQR
DDYSRYGY+YLM HKSEALEKFKEYK EVEN L +
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQR
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| KAA0060534.1 gag/pol protein [Cucumis melo var. makuwa] | 2.0e-92 | 72.46 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
L VGTG+ ISA+AVGD K+FF + M L+N+YIV KIKRNL+S+SCL+E YS+SFS+NE FI+K G IC KLE+NLYVL+P E +A+LN+EMF+TA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KRQ++S +TYLWHLRLG INL+RIGRLVKNGLL++LED +LPPCESCLEGKMTKRPFTGK YRAKEPLEL+H+DL GPMNV+A GG+EYFISFI
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
DDYS YGYLYL+ HKSEALEKFKEYK EVENLL ++
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| KAA0067938.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-90 | 72.03 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
LMVGTG+ ISA+AVGD+K+FF + M L+N+YIV KIKRNL+ +SCL+E YS++FS+NE FI+K G AKLE+NLYVLRP E++A+LN+EMF+TA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KRQ++S +TYLWHLRL INL+RIGRLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGK YRAKEPLEL+H+DL GPMNV+ARGG+EYFISFI
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
DDYSRYGYLYLM HK EALEKFKEYK EVENLL ++
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 1.2e-93 | 73.31 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
L VGTG+ ISA+AVGD K+FF + M L+N+YIV KIKRNL+S+SCL+E YS++FS+NE FI K G IC AKLENNLYVLRP E++A+LN+EMF+TA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KRQ++S +TYLWHLRLG INL+RIGRLVK+GLL++L+D +LPPCESCLEGKMTKRPFTGK YRAKEPLEL+H+DL GPMNV+ARG +EYFISFI
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
DDYSRYGYLYLM HKSEALEKFKEYK EVENLL ++
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| A0A5A7TU93 Gag/pol protein | 1.2e-85 | 68.51 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
+ VGTG +SA AVG ++++ + +LL+NVY+V +KRNLIS+ CLLEQ YS++F+VN+ FI K G +IC AKLENNLYVLR + S+A+LN EMFKTA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KR K+S ++ +LWHLRLG INLNRI RLVKNGLLS+LE+ +LP CESCLEGKMTKRPFTGK +RAKEPLELVH++L GPMNV+ARGG+EYFI+F
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQR
DDYSRYGY+YLM HKSEALEKFKEYK EVEN L +
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQR
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| A0A5A7TZD0 Gag/pol protein | 6.1e-95 | 74.15 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
L VGTG+ ISA+AVGD K+FF + M L+N+YIV KIKRNL+S+SCL+E YS++FS+NE FI K G IC AKLENNLYVLRP E++A+LN+EMF+TA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KRQ++S +TYLWHLRLG INL+RIGRLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGK YRAKEPLEL+H+DL GPMNV+ARGG+EYFISFI
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
DDYSRYGYLYLM HKSEALEKFKEYK EVENLL ++
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| A0A5A7VJG3 Gag/pol protein | 1.6e-90 | 72.03 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
LMVGTG+ ISA+AVGD+K+FF + M L+N+YIV KIKRNL+ +SCL+E YS++FS+NE FI+K G AKLE+NLYVLRP E++A+LN+EMF+TA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KRQ++S +TYLWHLRL INL+RIGRLVKNGLL++L+D +LPPCESCLEGKMTKRPFTGK YRAKEPLEL+H+DL GPMNV+ARGG+EYFISFI
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
DDYSRYGYLYLM HK EALEKFKEYK EVENLL ++
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| A0A5D3BNE1 Gag/pol protein | 9.8e-93 | 72.46 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
L VGTG+ ISA+AVGD K+FF + M L+N+YIV KIKRNL+S+SCL+E YS+SFS+NE FI+K G IC KLE+NLYVL+P E +A+LN+EMF+TA
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTA
Query: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
TQ KRQ++S +TYLWHLRLG INL+RIGRLVKNGLL++LED +LPPCESCLEGKMTKRPFTGK YRAKEPLEL+H+DL GPMNV+A GG+EYFISFI
Subjt: ETQPKRQKVS--QSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFI
Query: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
DDYS YGYLYL+ HKSEALEKFKEYK EVENLL ++
Subjt: DDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.1e-15 | 26.56 | Show/hide |
Query: ELFWHDSAAVQGCFRIILIKLMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNL
E + DS V +I + K GEFI A G +++ + ++ L++V + NL+S+ L E G S+ F + I+K G
Subjt: ELFWHDSAAVQGCFRIILIKLMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNL
Query: YVLRPIESRAILNNEMFKTAETQPKRQKVSQSTYLWHLRLGRIN------LNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRA--KEPL
L +++ +LNN + K + LWH R G I+ + R LL+ LE + CE CL GK + PF + + K PL
Subjt: YVLRPIESRAILNNEMFKTAETQPKRQKVSQSTYLWHLRLGRIN------LNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRA--KEPL
Query: ELVHTDLYGPMNVRARGGYEYFISFIDDYSRYGYLYLMSHKSEALEKFKEYKIEVE
+VH+D+ GP+ YF+ F+D ++ Y YL+ +KS+ F+++ + E
Subjt: ELVHTDLYGPMNVRARGGYEYFISFIDDYSRYGYLYLMSHKSEALEKFKEYKIEVE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-18 | 27.59 | Show/hide |
Query: VGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTAET
+G + +GDI + + ++L +V V ++ NLIS L GY F+ + +TK I LY N E
Subjt: VGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLEQGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNNEMFKTAET
Query: QPKRQKVSQSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFIDDYS
+ ++S LWH R+G ++ + L K L+S + T+ PC+ CL GK + F R L+LV++D+ GPM + + GG +YF++FIDD S
Subjt: QPKRQKVSQSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDGTLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEYFISFIDDYS
Query: RYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
R ++Y++ K + + F+++ VE R+
Subjt: RYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein | 2.7e-07 | 30.08 | Show/hide |
Query: KRQKVSQSTY-LWHLRLGRINLNRIGRLVKNGLLSQLEDGTLP-------PCESCLEGKMTK-RPFTGKRYR---AKEPLELVHTDLYGPMNVRARGGYE
K + V++ Y L H LG N I + +K ++ L++ + C CL GK TK R G R + + EP + +HTD++GP++ +
Subjt: KRQKVSQSTY-LWHLRLGRINLNRIGRLVKNGLLSQLEDGTLP-------PCESCLEGKMTK-RPFTGKRYR---AKEPLELVHTDLYGPMNVRARGGYE
Query: YFISFIDDYSRYGYLYLMSHKSE
YFISF D+ +R+ ++Y + + E
Subjt: YFISFIDDYSRYGYLYLMSHKSE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.5e-13 | 27.39 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLE-QGYSV-----SFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNN
+MV G I G + ++ R + L N+ V I +NLIS+ L G SV SF V + G + K ++ LY S+ +
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLE-QGYSV-----SFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNN
Query: EMFKTAETQPKRQKVSQSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDG-TLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEY
+F + + K + S+ WH RLG + + ++ N LS L C CL K K PF+ + PLE +++D++ + + Y Y
Subjt: EMFKTAETQPKRQKVSQSTYLWHLRLGRINLNRIGRLVKNGLLSQLEDG-TLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYEY
Query: FISFIDDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
++ F+D ++RY +LY + KS+ E F +K +EN Q R
Subjt: FISFIDDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-12 | 26.86 | Show/hide |
Query: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLE------QGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNN
+M+ G I G + S R + L+ V V I +NLIS+ L + + SF V + G + K ++ LY S+A+
Subjt: LMVGTGEFISAKAVGDIKMFFSRERDMLLDNVYIVTKIKRNLISISCLLE------QGYSVSFSVNEGFITKRGADICFAKLENNLYVLRPIESRAILNN
Query: EMFKTAETQPKRQKVSQSTY-LWHLRLGRINLNRIGRLVKNGLLSQLEDG-TLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYE
MF + S++T+ WH RLG +L + ++ N L L L C C K K PF+ + +PLE +++D++ + + Y
Subjt: EMFKTAETQPKRQKVSQSTY-LWHLRLGRINLNRIGRLVKNGLLSQLEDG-TLPPCESCLEGKMTKRPFTGKRYRAKEPLELVHTDLYGPMNVRARGGYE
Query: YFISFIDDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
Y++ F+D ++RY +LY + KS+ + F +K VEN Q R
Subjt: YFISFIDDYSRYGYLYLMSHKSEALEKFKEYKIEVENLLQRR
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