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Spg019372 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019372
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPAP_fibrillin domain-containing protein
Genome locationscaffold1:48316956..48322372
RNA-Seq ExpressionSpg019372
SyntenySpg019372
Gene Ontology termsGO:0009579 - thylakoid (cellular component)
GO:0010287 - plastoglobule (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9600497.1 hypothetical protein IFM89_009946 [Coptis chinensis]3.2e-0682.35Show/hide
Query:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        G LKVLDDKWIQV+FEP ELKVG LEF YGG+SE
Subjt:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
KAF9600533.1 hypothetical protein IFM89_009982 [Coptis chinensis]3.2e-0682.35Show/hide
Query:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        G LKVLDDKWIQV+FEP ELKVG LEF YGG+SE
Subjt:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
XP_017224985.1 PREDICTED: probable plastid-lipid-associated protein 8, chloroplastic [Daucus carota subsp. sativus]2.4e-0667.44Show/hide
Query:  GVVSRMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        G+   ++  G LK LD+KWIQVVFEP ELKVGGLEF YGG+SE
Subjt:  GVVSRMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
XP_022929601.1 probable plastid-lipid-associated protein 8, chloroplastic [Cucurbita moschata]4.1e-0671.79Show/hide
Query:  RMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        +++  G LK LDDKWI+VVFEP ELKVGGLEF YGG+SE
Subjt:  RMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
XP_022997459.1 probable plastid-lipid-associated protein 8, chloroplastic [Cucurbita maxima]4.1e-0671.79Show/hide
Query:  RMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        +++  G LK LDDKWI+VVFEP ELKVGGLEF YGG+SE
Subjt:  RMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
TrEMBL top hitse value%identityAlignment
A0A166HTC2 Uncharacterized protein1.2e-0667.44Show/hide
Query:  GVVSRMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        G+   ++  G LK LD+KWIQVVFEP ELKVGGLEF YGG+SE
Subjt:  GVVSRMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
A0A4Y1QUC4 PREDICTED: probable plastid-lipid-associated2.0e-0653.7Show/hide
Query:  LKNLLKSNNGAGVVSRMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        +KN +  +    +   ++  G LK LDDKWIQV+FEP ELKVG LEF YGG+SE
Subjt:  LKNLLKSNNGAGVVSRMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
A0A6J1BS60 probable plastid-lipid-associated protein 8, chloroplastic2.6e-0682.35Show/hide
Query:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        G LK LDDKWIQVVFEP ELKVGG EF YGG+SE
Subjt:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
A0A6J1ENK9 probable plastid-lipid-associated protein 8, chloroplastic2.0e-0671.79Show/hide
Query:  RMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        +++  G LK LDDKWI+VVFEP ELKVGGLEF YGG+SE
Subjt:  RMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
A0A6J1KBD6 probable plastid-lipid-associated protein 8, chloroplastic2.0e-0671.79Show/hide
Query:  RMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        +++  G LK LDDKWI+VVFEP ELKVGGLEF YGG+SE
Subjt:  RMTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
SwissProt top hitse value%identityAlignment
Q941D3 Probable plastid-lipid-associated protein 8, chloroplastic4.3e-0664.71Show/hide
Query:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        G LK LD +W+QV+FEP E+KVG LEF YG +SE
Subjt:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
Arabidopsis top hitse value%identityAlignment
AT5G19940.1 Plastid-lipid associated protein PAP / fibrillin family protein3.1e-0764.71Show/hide
Query:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        G LK LD +W+QV+FEP E+KVG LEF YG +SE
Subjt:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
AT5G19940.2 Plastid-lipid associated protein PAP / fibrillin family protein3.1e-0764.71Show/hide
Query:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE
        G LK LD +W+QV+FEP E+KVG LEF YG +SE
Subjt:  GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTCGTCTTCTTCTTCCTTCGCGTGTGCAGCAGTCAGACGGTTCGACCTTTTCGTTCTCTCGGGCAGCATCATCTTCTTCTTCCTTTGCGTGCGCAGCAGTCAAGCGGTT
CGACCTTTTCGTTCTCTCGGGCAGCATCGTCTTCTTCTTCCTTTGCGTGCGCAGCAGTCAGGCGGTTTGGCTTCGTCGTACACATGTCATTATCATGGCTCCTCCAACTG
TTGCTATGGTTCCCACCAACTTGGCTTGGCTTCTGATGCTTTTGATTTTTACCTTCTCGAGCCTGAAAAACCTCTTGAAGTCTAACAATGGAGCTGGAGTTGTATCGAGA
ATGACTTTTTGGGGTATATTGAAGGTACTAGATGATAAATGGATTCAAGTTGTCTTCGAGCCACATGAATTGAAAGTTGGTGGTTTAGAGTTTCCATATGGTGGCAAAAG
CGAGAGATGTCCATATGCGTTACCTGTCAGGGATTTAGCATACTGCTACCGCATCCGGCTCGCCAAGCAGGAGTTACCCTTTTTCCGCCCACTTGCGTTAGCTGTATCAG
TTGTGTCAGCGCTTGTCTTTTCATCATCTTATCTGTCTCTTGATCATCTTGGGATGCGTACCTGCGCGGAGAATAAACTTTGA
mRNA sequenceShow/hide mRNA sequence
CGTCGTCTTCTTCTTCCTTCGCGTGTGCAGCAGTCAGACGGTTCGACCTTTTCGTTCTCTCGGGCAGCATCATCTTCTTCTTCCTTTGCGTGCGCAGCAGTCAAGCGGTT
CGACCTTTTCGTTCTCTCGGGCAGCATCGTCTTCTTCTTCCTTTGCGTGCGCAGCAGTCAGGCGGTTTGGCTTCGTCGTACACATGTCATTATCATGGCTCCTCCAACTG
TTGCTATGGTTCCCACCAACTTGGCTTGGCTTCTGATGCTTTTGATTTTTACCTTCTCGAGCCTGAAAAACCTCTTGAAGTCTAACAATGGAGCTGGAGTTGTATCGAGA
ATGACTTTTTGGGGTATATTGAAGGTACTAGATGATAAATGGATTCAAGTTGTCTTCGAGCCACATGAATTGAAAGTTGGTGGTTTAGAGTTTCCATATGGTGGCAAAAG
CGAGAGATGTCCATATGCGTTACCTGTCAGGGATTTAGCATACTGCTACCGCATCCGGCTCGCCAAGCAGGAGTTACCCTTTTTCCGCCCACTTGCGTTAGCTGTATCAG
TTGTGTCAGCGCTTGTCTTTTCATCATCTTATCTGTCTCTTGATCATCTTGGGATGCGTACCTGCGCGGAGAATAAACTTTGA
Protein sequenceShow/hide protein sequence
RRLLLPSRVQQSDGSTFSFSRAASSSSSFACAAVKRFDLFVLSGSIVFFFLCVRSSQAVWLRRTHVIIMAPPTVAMVPTNLAWLLMLLIFTFSSLKNLLKSNNGAGVVSR
MTFWGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSERCPYALPVRDLAYCYRIRLAKQELPFFRPLALAVSVVSALVFSSSYLSLDHLGMRTCAENKL