; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019383 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019383
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold1:47557155..47560946
RNA-Seq ExpressionSpg019383
SyntenySpg019383
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]3.7e-3035.5Show/hide
Query:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK-------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQIT
        +P +VRGP M  FS EG + YF ++EAR  IH                    DLPND+    P   L N+L  W IC R  TLS++YLP  +++P   +T
Subjt:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK-------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQIT

Query:  QCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFEP-----GEFRSRDNDCSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPN
        Q +  WW  K   Y E+    LV+S IP PS+P+  K  G + GGK I + E       E      D S SS  D HWKRP K  + S    +  DG   
Subjt:  QCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFEP-----GEFRSRDNDCSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPN

Query:  ASQFLALPTL--LSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP
            L +P +  LSPLND L       S  S   P+  D     VG  + P+++   QS  P
Subjt:  ASQFLALPTL--LSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP

KAA0034815.1 hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa]8.3e-3035.14Show/hide
Query:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV
        +P +VRGP M  FS EG + YF ++EAR  IH                                  DLPND+    P   L N+L  W IC+R  TLS++
Subjt:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV

Query:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE------PGEFRSRDNDCSQSSSGDHHWKRPKKSN
        YLPA +++P   +TQ +  WW  K   Y E+    LV+SAIP PS+P+  K  G + GGK I + E        E + R  D S S+  D +WKRP K  
Subjt:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE------PGEFRSRDNDCSQSSSGDHHWKRPKKSN

Query:  QPSVCEDELFDGVP-NASQFLALPTLLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP
        + S    +  DG   +A + L +P  LSPLND L    G  S  S   P+  D     VG  K P+++   QS  P
Subjt:  QPSVCEDELFDGVP-NASQFLALPTLLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP

KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]1.8e-2933.7Show/hide
Query:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV
        +P +VRGP M  FS + G+ YF +++AR  IH                                  DLPND+    P   L N+L  W IC R  TL ++
Subjt:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV

Query:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE---PGEFRSRDNDCSQSSSGDHHWKRPKKSNQPS
        YLPA +++P   +TQ +  WW  K   Y E+    LV+S IP PS+P+  K  G + GGK I + E   P          S SS  DHHWKRP K  + S
Subjt:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE---PGEFRSRDNDCSQSSSGDHHWKRPKKSNQPS

Query:  VCEDELFDGVPNASQFLALPT----LLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP
               D  PN     AL       LSPLND L       S  S   P+  D     VG  K P+++   QS  P
Subjt:  VCEDELFDGVPNASQFLALPT----LLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]1.7e-3535.33Show/hide
Query:  VRGPMMVEFSREGGAKYFDDFEARVHIHK--------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQITQCYRSWWLA
        +RGP MVEFS EGGAKY+ + EAR+HIHK              D+P DLSE++P+ANL NV   WMICVR  TLSQVYLPA T+ P   IT  Y++WWLA
Subjt:  VRGPMMVEFSREGGAKYFDDFEARVHIHK--------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQITQCYRSWWLA

Query:  KDENYLEEGIEKLVASAIPIPSKPKFSKKV---------------------------GDDNGGKRILMFEPGEFRSRDNDCSQSSSGDHHWKRPKKSNQP
        K  +YL+EG++ L+    P   K K +KK+                           G DN  K +L     +  S   + S SS+ D HWKRPK+ ++ 
Subjt:  KDENYLEEGIEKLVASAIPIPSKPKFSKKV---------------------------GDDNGGKRILMFEPGEFRSRDNDCSQSSSGDHHWKRPKKSNQP

Query:  SVCEDELFDGVPNASQFLALPTLLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHPVTDEIPGQMKTTTHADASEISDYCADD
        S+ +++    VP+    +A P  LS                                N K P+   +  +C  VT   P ++  T     SEIS +CAD+
Subjt:  SVCEDELFDGVPNASQFLALPTLLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHPVTDEIPGQMKTTTHADASEISDYCADD

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.7e-3329.56Show/hide
Query:  PEKVRGPMMVEFSREGGAKYFDDFEARVHIHK-------------------------------------------------------------------D
        P  +RGP MVEFS EGGAKY+ + EAR HIHK                                                                   D
Subjt:  PEKVRGPMMVEFSREGGAKYFDDFEARVHIHK-------------------------------------------------------------------D

Query:  LPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKV------------GD
        +P DL EE+PEAN +NV   WMIC+R  TLSQVYLP     P   +T  Y+ WWLAK  +YL+EG++ L+    P   K K +KK+             D
Subjt:  LPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKV------------GD

Query:  DNGGKRILMFEPGEFRSRDN-----------------------------------DCSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPNASQFLALPT--
        +   + +   E G  R  DN                                   + SQSS+ D HWKRPKK N+ S+ ++E    VP+A+QF  +P+  
Subjt:  DNGGKRILMFEPGEFRSRDN-----------------------------------DCSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPNASQFLALPT--

Query:  -------------LLSPL-------NDPLIEAEGHH---------SPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHPVTDEIPGQMKTTTHADASEI
                     + SPL       N  L  + G H         S P+    NV   V +  GN K P+   +  +C PV    P +++ T     SEI
Subjt:  -------------LLSPL-------NDPLIEAEGHH---------SPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHPVTDEIPGQMKTTTHADASEI

Query:  SDYCAD
        S +CAD
Subjt:  SDYCAD

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein1.8e-3035.5Show/hide
Query:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK-------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQIT
        +P +VRGP M  FS EG + YF ++EAR  IH                    DLPND+    P   L N+L  W IC R  TLS++YLP  +++P   +T
Subjt:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK-------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQIT

Query:  QCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFEP-----GEFRSRDNDCSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPN
        Q +  WW  K   Y E+    LV+S IP PS+P+  K  G + GGK I + E       E      D S SS  D HWKRP K  + S    +  DG   
Subjt:  QCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFEP-----GEFRSRDNDCSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPN

Query:  ASQFLALPTL--LSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP
            L +P +  LSPLND L       S  S   P+  D     VG  + P+++   QS  P
Subjt:  ASQFLALPTL--LSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP

A0A5A7T019 PMD domain-containing protein4.0e-3035.14Show/hide
Query:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV
        +P +VRGP M  FS EG + YF ++EAR  IH                                  DLPND+    P   L N+L  W IC+R  TLS++
Subjt:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV

Query:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE------PGEFRSRDNDCSQSSSGDHHWKRPKKSN
        YLPA +++P   +TQ +  WW  K   Y E+    LV+SAIP PS+P+  K  G + GGK I + E        E + R  D S S+  D +WKRP K  
Subjt:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE------PGEFRSRDNDCSQSSSGDHHWKRPKKSN

Query:  QPSVCEDELFDGVP-NASQFLALPTLLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP
        + S    +  DG   +A + L +P  LSPLND L    G  S  S   P+  D     VG  K P+++   QS  P
Subjt:  QPSVCEDELFDGVP-NASQFLALPTLLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP

A0A5A7TFC8 PMD domain-containing protein8.9e-3033.7Show/hide
Query:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV
        +P +VRGP M  FS + G+ YF +++AR  IH                                  DLPND+    P   L N+L  W IC R  TL ++
Subjt:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV

Query:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE---PGEFRSRDNDCSQSSSGDHHWKRPKKSNQPS
        YLPA +++P   +TQ +  WW  K   Y E+    LV+S IP PS+P+  K  G + GGK I + E   P          S SS  DHHWKRP K  + S
Subjt:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE---PGEFRSRDNDCSQSSSGDHHWKRPKKSNQPS

Query:  VCEDELFDGVPNASQFLALPT----LLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP
               D  PN     AL       LSPLND L       S  S   P+  D     VG  K P+++   QS  P
Subjt:  VCEDELFDGVPNASQFLALPT----LLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP

A0A5A7U4C3 Uncharacterized protein8.3e-3635.33Show/hide
Query:  VRGPMMVEFSREGGAKYFDDFEARVHIHK--------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQITQCYRSWWLA
        +RGP MVEFS EGGAKY+ + EAR+HIHK              D+P DLSE++P+ANL NV   WMICVR  TLSQVYLPA T+ P   IT  Y++WWLA
Subjt:  VRGPMMVEFSREGGAKYFDDFEARVHIHK--------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQITQCYRSWWLA

Query:  KDENYLEEGIEKLVASAIPIPSKPKFSKKV---------------------------GDDNGGKRILMFEPGEFRSRDNDCSQSSSGDHHWKRPKKSNQP
        K  +YL+EG++ L+    P   K K +KK+                           G DN  K +L     +  S   + S SS+ D HWKRPK+ ++ 
Subjt:  KDENYLEEGIEKLVASAIPIPSKPKFSKKV---------------------------GDDNGGKRILMFEPGEFRSRDNDCSQSSSGDHHWKRPKKSNQP

Query:  SVCEDELFDGVPNASQFLALPTLLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHPVTDEIPGQMKTTTHADASEISDYCADD
        S+ +++    VP+    +A P  LS                                N K P+   +  +C  VT   P ++  T     SEIS +CAD+
Subjt:  SVCEDELFDGVPNASQFLALPTLLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHPVTDEIPGQMKTTTHADASEISDYCADD

A0A5D3D7V4 PMD domain-containing protein5.8e-2933.33Show/hide
Query:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV
        +P +VRGP M  FS + G+ YF +++AR  IH                                  DLPND+    P   L N+L  W IC R  TL ++
Subjt:  VPEKVRGPMMVEFSREGGAKYFDDFEARVHIHK---------------------------------DLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQV

Query:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE---PGEFRSRDNDCSQSSSGDHHWKRPKKSNQPS
        YLPA +++P   +TQ +  WW  K   Y E+    LV+S IP PS+P+  K  G + GGK I + E   P          S SS  DHHWKRP K  + S
Subjt:  YLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAIPIPSKPKFSKKVGDDNGGKRILMFE---PGEFRSRDNDCSQSSSGDHHWKRPKKSNQPS

Query:  VCEDELFDGVPNASQFLALPT----LLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP
                  PN     AL       LSPLND L       S  S   P+  D     VG  K P+++   QS  P
Subjt:  VCEDELFDGVPNASQFLALPT----LLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAARVGNFKAPMDRVVTQSCHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTTCCAGAAAAAGTTAGGGGCCCAATGATGGTTGAGTTTTCCAGAGAGGGTGGAGCTAAATACTTTGATGATTTTGAGGCTCGTGTACATATCCATAAAGACTT
GCCAAATGATCTAAGTGAAGAAGTTCCTGAAGCCAACTTATATAATGTATTGCGCCTTTGGATGATATGTGTTCGAGCAAAAACACTATCTCAAGTTTATCTCCCTGCAC
ACACGATGAAGCCACACATCCAAATTACCCAATGCTACAGGAGTTGGTGGTTGGCAAAAGATGAAAATTATCTTGAAGAAGGCATAGAAAAGTTGGTGGCTAGTGCTATT
CCTATTCCTTCCAAGCCGAAATTTTCCAAAAAGGTTGGTGATGACAACGGAGGCAAAAGGATTCTCATGTTTGAGCCTGGTGAATTTCGTTCTAGGGATAATGATTGTAG
TCAGAGCAGTAGCGGCGATCATCATTGGAAAAGGCCTAAAAAGTCCAATCAACCATCAGTATGTGAAGATGAACTTTTTGATGGAGTTCCCAACGCATCACAATTTCTTG
CACTCCCTACACTACTGTCACCTTTAAATGATCCCCTTATAGAAGCCGAGGGGCATCATAGTCCTCCTTCTTTTGTGAGTCCAAACGTTTTTGATTATGTAGCTGCGCGT
GTGGGCAATTTCAAAGCGCCAATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTCCTGGACAAATGAAGACAACAACCCATGCAGATGCGTCTGA
GATCTCTGATTATTGTGCTGACGATCGAGAAGAAGAAGAATTGGAAGTTAAGCTTGAAGCTGTGAAAGCTAGGCGAGAAACTATAAGTAGTATCGAAGATGCCCCTGTTC
TTACTGATGTTGATGCTAAAACGCTGACGATACTTCGTGGAATGTTGGAAGATGCACGAGAAGAGCTGAAGGACTACAAGTGGATGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTTCCAGAAAAAGTTAGGGGCCCAATGATGGTTGAGTTTTCCAGAGAGGGTGGAGCTAAATACTTTGATGATTTTGAGGCTCGTGTACATATCCATAAAGACTT
GCCAAATGATCTAAGTGAAGAAGTTCCTGAAGCCAACTTATATAATGTATTGCGCCTTTGGATGATATGTGTTCGAGCAAAAACACTATCTCAAGTTTATCTCCCTGCAC
ACACGATGAAGCCACACATCCAAATTACCCAATGCTACAGGAGTTGGTGGTTGGCAAAAGATGAAAATTATCTTGAAGAAGGCATAGAAAAGTTGGTGGCTAGTGCTATT
CCTATTCCTTCCAAGCCGAAATTTTCCAAAAAGGTTGGTGATGACAACGGAGGCAAAAGGATTCTCATGTTTGAGCCTGGTGAATTTCGTTCTAGGGATAATGATTGTAG
TCAGAGCAGTAGCGGCGATCATCATTGGAAAAGGCCTAAAAAGTCCAATCAACCATCAGTATGTGAAGATGAACTTTTTGATGGAGTTCCCAACGCATCACAATTTCTTG
CACTCCCTACACTACTGTCACCTTTAAATGATCCCCTTATAGAAGCCGAGGGGCATCATAGTCCTCCTTCTTTTGTGAGTCCAAACGTTTTTGATTATGTAGCTGCGCGT
GTGGGCAATTTCAAAGCGCCAATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTCCTGGACAAATGAAGACAACAACCCATGCAGATGCGTCTGA
GATCTCTGATTATTGTGCTGACGATCGAGAAGAAGAAGAATTGGAAGTTAAGCTTGAAGCTGTGAAAGCTAGGCGAGAAACTATAAGTAGTATCGAAGATGCCCCTGTTC
TTACTGATGTTGATGCTAAAACGCTGACGATACTTCGTGGAATGTTGGAAGATGCACGAGAAGAGCTGAAGGACTACAAGTGGATGTCGTGA
Protein sequenceShow/hide protein sequence
MTVPEKVRGPMMVEFSREGGAKYFDDFEARVHIHKDLPNDLSEEVPEANLYNVLRLWMICVRAKTLSQVYLPAHTMKPHIQITQCYRSWWLAKDENYLEEGIEKLVASAI
PIPSKPKFSKKVGDDNGGKRILMFEPGEFRSRDNDCSQSSSGDHHWKRPKKSNQPSVCEDELFDGVPNASQFLALPTLLSPLNDPLIEAEGHHSPPSFVSPNVFDYVAAR
VGNFKAPMDRVVTQSCHPVTDEIPGQMKTTTHADASEISDYCADDREEEELEVKLEAVKARRETISSIEDAPVLTDVDAKTLTILRGMLEDAREELKDYKWMS