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Spg019400 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019400
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNBS-LRR type resistance protein
Genome locationscaffold1:45246736..45248716
RNA-Seq ExpressionSpg019400
SyntenySpg019400
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]5.3e-0559.02Show/hide
Query:  GSNARFW--LFD--------RPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        G+   FW  LF         RPRGNR SLQT +L KTVEI+LP+PDTLPT AES  S+SST
Subjt:  GSNARFW--LFD--------RPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]1.4e-0577.5Show/hide
Query:  PRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        PRGNR +L T +L KTVEI+LPVPDTLPTSAESS+S+SST
Subjt:  PRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]2.1e-0648.15Show/hide
Query:  FSLVFRAFWSVQDESKALFEFMSMEDKTIYGSNARFWLFDRPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        +   F   W++ DE  A   F+S    ++  SN      + PRGNR SLQ  +L KTVEI+LP+PDTLPTS+ESS+S+SST
Subjt:  FSLVFRAFWSVQDESKALFEFMSMEDKTIYGSNARFWLFDRPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

KAA0066795.1 uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa]4.1e-0582.5Show/hide
Query:  PRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        PRGNR SLQTREL KT+E  LPVPDTLPTSAESS S+SST
Subjt:  PRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]8.2e-0658.33Show/hide
Query:  SVQDESKALFEFMSMEDKTIYGSNARFWLFDRPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        S Q ES+ALF    M  K I        ++  PRGNR S QT +L KTVEI+LPVPDTLPTSAESS S+SST
Subjt:  SVQDESKALFEFMSMEDKTIYGSNARFWLFDRPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein2.6e-0559.02Show/hide
Query:  GSNARFW--LFD--------RPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        G+   FW  LF         RPRGNR SLQT +L KTVEI+LP+PDTLPT AES  S+SST
Subjt:  GSNARFW--LFD--------RPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

A0A5A7UAH6 CCHC-type domain-containing protein6.7e-0677.5Show/hide
Query:  PRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        PRGNR +L T +L KTVEI+LPVPDTLPTSAESS+S+SST
Subjt:  PRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

A0A5A7V2F2 Uncharacterized protein1.0e-0648.15Show/hide
Query:  FSLVFRAFWSVQDESKALFEFMSMEDKTIYGSNARFWLFDRPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        +   F   W++ DE  A   F+S    ++  SN      + PRGNR SLQ  +L KTVEI+LP+PDTLPTS+ESS+S+SST
Subjt:  FSLVFRAFWSVQDESKALFEFMSMEDKTIYGSNARFWLFDRPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

A0A5D3BET3 Uncharacterized protein4.0e-0658.33Show/hide
Query:  SVQDESKALFEFMSMEDKTIYGSNARFWLFDRPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        S Q ES+ALF    M  K I        ++  PRGNR S QT +L KTVEI+LPVPDTLPTSAESS S+SST
Subjt:  SVQDESKALFEFMSMEDKTIYGSNARFWLFDRPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

A0A5D3DWP3 Uncharacterized protein2.0e-0582.5Show/hide
Query:  PRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST
        PRGNR SLQTREL KT+E  LPVPDTLPTSAESS S+SST
Subjt:  PRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACAATGGCAAGTTTTGTGGTTATTGTGGTTTCATTGTTGGTTTAAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTG
GAGTGTACAAGATGAATCAAAAGCTCTATTTGAATTCATGAGCATGGAAGATAAGACTATCTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATA
GGTCGAGTCTACAAACCAGGGAACTAGCTAAGACTGTAGAGATCAAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGA
mRNA sequenceShow/hide mRNA sequence
GACAATGGCAAGTTTTGTGGTTATTGTGGTTTCATTGTTGGTTTAAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTG
GAGTGTACAAGATGAATCAAAAGCTCTATTTGAATTCATGAGCATGGAAGATAAGACTATCTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATA
GGTCGAGTCTACAAACCAGGGAACTAGCTAAGACTGTAGAGATCAAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGA
Protein sequenceShow/hide protein sequence
DNGKFCGYCGFIVGLRAQDFRAKQEDLWFSLVFRAFWSVQDESKALFEFMSMEDKTIYGSNARFWLFDRPRGNRSSLQTRELAKTVEIKLPVPDTLPTSAESSRSSSST