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Spg019428 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019428
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold1:41000062..41001525
RNA-Seq ExpressionSpg019428
SyntenySpg019428
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]6.2e-1283.33Show/hide
Query:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        PRGNR SLQTG+LDKTVEIELP+PDTLPT AES  S+SSTWLELY ES
Subjt:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]3.3e-1385.42Show/hide
Query:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        PRGNR +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTWLELY ES
Subjt:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]2.8e-1281.25Show/hide
Query:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        PRGNR SLQ G+L+KTVEIELP+PDTLPTS+ESS+S+SSTWLELY ES
Subjt:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
KAA0066795.1 uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa]3.6e-1284Show/hide
Query:  LWPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        +WPRGNR SLQT ELDKT  IELPVPDTLPTSAESS S+SSTWLELY ES
Subjt:  LWPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]1.0e-1469.23Show/hide
Query:  GMENRAQDFRAKQEDLWPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        GM  +   +     ++WPRGNR S QTG+LDKTVEIELPVPDTLPTSAESS S+SSTWLELY ES
Subjt:  GMENRAQDFRAKQEDLWPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein3.0e-1283.33Show/hide
Query:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        PRGNR SLQTG+LDKTVEIELP+PDTLPT AES  S+SSTWLELY ES
Subjt:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
A0A5A7UAH6 CCHC-type domain-containing protein1.6e-1385.42Show/hide
Query:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        PRGNR +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTWLELY ES
Subjt:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
A0A5A7V2F2 Uncharacterized protein1.4e-1281.25Show/hide
Query:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        PRGNR SLQ G+L+KTVEIELP+PDTLPTS+ESS+S+SSTWLELY ES
Subjt:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
A0A5D3BET3 Uncharacterized protein5.0e-1569.23Show/hide
Query:  GMENRAQDFRAKQEDLWPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        GM  +   +     ++WPRGNR S QTG+LDKTVEIELPVPDTLPTSAESS S+SSTWLELY ES
Subjt:  GMENRAQDFRAKQEDLWPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
A0A5D3DWP3 Uncharacterized protein1.8e-1284Show/hide
Query:  LWPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
        +WPRGNR SLQT ELDKT  IELPVPDTLPTSAESS S+SSTWLELY ES
Subjt:  LWPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGT
AGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCC
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGT
AGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCC
Protein sequenceShow/hide protein sequence
MVSGMENRAQDFRAKQEDLWPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES