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Spg019456 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019456
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiondelta 9 desaturase 1
Genome locationscaffold1:40864216..40865916
RNA-Seq ExpressionSpg019456
SyntenySpg019456
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0009979 - 16:0 monogalactosyldiacylglycerol desaturase activity (molecular function)
GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (molecular function)
InterPro domainsIPR015876 - Acyl-CoA desaturase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5817013.1 putative acyl-CoA desaturase [Helianthus annuus]4.6e-2081.48Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        WV LITFGEGWHNNHHAFEYSA+HGLEWW+IDF WY IRFL+A+ LATDV+LP+
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

KVH93050.1 Fatty acid desaturase, type 1, core [Cynara cardunculus var. scolymus]2.7e-2078.57Show/hide
Query:  ERWVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        +RWV LITFGEGWHNNHHAFEYSA+HGLEWW+ID  WY IRFL++I LAT+V+LPS
Subjt:  ERWVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

XP_008451259.1 PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis melo]4.6e-2059.52Show/hide
Query:  PVGGGGEEKERW-VGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPKGPKTNTPSSSKP
        P   G   K  W V L+TFGEGWHNNHHAFEYSA+HGLEWW+ID+GWYFIRFL+ I LAT+V+ PS K        + P+  KP
Subjt:  PVGGGGEEKERW-VGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPKGPKTNTPSSSKP

XP_021610142.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Manihot esculenta]1.2e-2070.77Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPKGPKTN
        WV ++ FGEGWHNNHHAFEYSA+HGLEWWEID  WYF+RFLQAIRLATDV++PS     +   TN
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPKGPKTN

XP_022155827.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Momordica charantia]4.6e-2070.59Show/hide
Query:  GGEEKERW-VGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPK
        G   K  W V L+TFGEGWHNNHHAFEYSA+HG +WW+IDFGWYFI FL+AI LATDV+LPS K + K
Subjt:  GGEEKERW-VGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPK

TrEMBL top hitse value%identityAlignment
A0A103XLK4 Fatty acid desaturase, type 1, core1.3e-2078.57Show/hide
Query:  ERWVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        +RWV LITFGEGWHNNHHAFEYSA+HGLEWW+ID  WY IRFL++I LAT+V+LPS
Subjt:  ERWVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

A0A1S3BQG5 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like2.2e-2059.52Show/hide
Query:  PVGGGGEEKERW-VGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPKGPKTNTPSSSKP
        P   G   K  W V L+TFGEGWHNNHHAFEYSA+HGLEWW+ID+GWYFIRFL+ I LAT+V+ PS K        + P+  KP
Subjt:  PVGGGGEEKERW-VGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPKGPKTNTPSSSKP

A0A251VDU0 Putative fatty acid desaturase, type 1, core2.2e-2081.48Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        WV LITFGEGWHNNHHAFEYSA+HGLEWW+IDF WY IRFL+A+ LATDV+LP+
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

A0A2C9W1K8 FA_desaturase domain-containing protein5.9e-2170.77Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPKGPKTN
        WV ++ FGEGWHNNHHAFEYSA+HGLEWWEID  WYF+RFLQAIRLATDV++PS     +   TN
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPKGPKTN

A0A6J1DQF3 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like2.2e-2070.59Show/hide
Query:  GGEEKERW-VGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPK
        G   K  W V L+TFGEGWHNNHHAFEYSA+HG +WW+IDFGWYFI FL+AI LATDV+LPS K + K
Subjt:  GGEEKERW-VGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPK

SwissProt top hitse value%identityAlignment
O65797 Delta-9 acyl-lipid desaturase 12.6e-1866.67Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        W+ + +FGE WHNNHHAFE SA+ GLEWW+ID  WY +RFL+ I LATDV+LPS
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

P0DOW3 Acyl-CoA 5-desaturase AL211.7e-1762.96Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        ++ ++T GEGWHNNHHAFEYSA+HG+EWW+ID  WY I+ L+ + LATDV++PS
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

Q949X0 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic9.6e-2172.22Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        WV  + FGEGWHNNHHAFE+SA+HGLEWW++D  WY ++FLQAI LATDV+LPS
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

Q9FV68 Icosanoyl-CoA 5-desaturase (Fragment)2.0e-1874.07Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        +V L  FGEGWHNNHHAFE SA+HGLEWWEID  WY IR LQAI LAT+V+LP+
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

Q9LVZ3 Probable lipid desaturase ADS3.2, chloroplastic3.1e-1968.52Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        WV ++T GEGWHNNHHAFE+SA+HGLEWW++D  W  IRFL+AI LAT+V+LP+
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

Arabidopsis top hitse value%identityAlignment
AT1G06080.1 delta 9 desaturase 11.9e-1966.67Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        W+ + +FGE WHNNHHAFE SA+ GLEWW+ID  WY +RFL+ I LATDV+LPS
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

AT1G06360.1 Fatty acid desaturase family protein3.5e-1864.81Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        W+ L T GE WHNNHHAFE SA+ GLEWW+ID  WY IR  + + LATDV+LPS
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

AT2G31360.1 16:0delta9 desaturase 22.7e-1861.11Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        W+ + +FGE WHNNHHAFE SA+ GLEWW+ID  WY +RF + I LATDV++P+
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

AT3G15850.1 fatty acid desaturase 56.8e-2272.22Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        WV  + FGEGWHNNHHAFE+SA+HGLEWW++D  WY ++FLQAI LATDV+LPS
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS

AT3G15870.1 Fatty acid desaturase family protein2.2e-2068.52Show/hide
Query:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS
        WV ++T GEGWHNNHHAFE+SA+HGLEWW++D  W  IRFL+AI LAT+V+LP+
Subjt:  WVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTAGGTGGTGGTGGTGAAGAAAAAGAAAGGTGGGTGGGTTTAATTACGTTTGGAGAAGGATGGCATAATAACCACCACGCATTCGAGTATTCAGCGAAGCATGG
TCTTGAATGGTGGGAGATTGACTTTGGTTGGTATTTCATAAGGTTTCTTCAAGCAATAAGACTGGCCACTGATGTCAGATTACCCTCTTCAAAACTTCACCCAAAAGGAC
CAAAAACCAACACTCCATCATCTTCCAAACCCTATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGTAGGTGGTGGTGGTGAAGAAAAAGAAAGGTGGGTGGGTTTAATTACGTTTGGAGAAGGATGGCATAATAACCACCACGCATTCGAGTATTCAGCGAAGCATGG
TCTTGAATGGTGGGAGATTGACTTTGGTTGGTATTTCATAAGGTTTCTTCAAGCAATAAGACTGGCCACTGATGTCAGATTACCCTCTTCAAAACTTCACCCAAAAGGAC
CAAAAACCAACACTCCATCATCTTCCAAACCCTATAATTAA
Protein sequenceShow/hide protein sequence
MPVGGGGEEKERWVGLITFGEGWHNNHHAFEYSAKHGLEWWEIDFGWYFIRFLQAIRLATDVRLPSSKLHPKGPKTNTPSSSKPYN