; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019458 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019458
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionClass II aaRS and biotin synthetases superfamily protein
Genome locationscaffold1:40437386..40456427
RNA-Seq ExpressionSpg019458
SyntenySpg019458
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46100.1 Histidyl-tRNA synthetase 19.3e-0580.77Show/hide
Query:  LLPFFKRIGITASDVGFKVSSRKVVE
        ++ FFKRIGITASDVGFKVSSRKV++
Subjt:  LLPFFKRIGITASDVGFKVSSRKVVE
AT5G03406.1 Class II aaRS and biotin synthetases superfamily protein7.1e-0580.77Show/hide
Query:  LLPFFKRIGITASDVGFKVSSRKVVE
        ++ FFKRIGITASDVGFKVSSRKV++
Subjt:  LLPFFKRIGITASDVGFKVSSRKVVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCACGTCTCCTCTCGACCCGATTAAGATCAGGTTTCAGGTGTTGCTTCAGTTGAATTTATTGGTCCAAGAGAGCCTGTGGCAGTTAGGTGTTGCTATTCCTACAAT
CAAGCATTTGACTGAGAAGGGAGCTAAAGTGCTTCTGTCCAGTCATTTGATGGTAGCTATTAAGCATTTGAAGTTGAGCTTCTATCTTCTATTGTTACCTTTTTTCAAGC
GAATTGGAATTACAGCTTCAGATGTTGGATTCAAGGTTTCCAGTCGGAAGGTTGTAGAAGCTGAAAAGGGTAATCACTCCCACGATGACTTGCAGACAGATCATGAGAAT
CTCATGGTGCAACCAAATGGAGGAGACTATTCTGGGTCTGTTCCGAGATCCGACGCGCCGCCGCCTGCAACCCACTCACGAGCTGCCGTCGATCTGCGAGTCGCCGTCGC
CACTGTAGGCGCGGACAGCAGCGAGGAGGGACCATTTTTCCGTGTTTTCGGCTGTTTTAGTTTAGCTTCCGATTTCAAGGTGCCCGTGGTGTTTGGAGGCCGAATTATCA
AATTTGAGCGATTTGGGACTGCTGGACAGCAAGCTGTGGTTCTGTTTGGGGTAGAGGTAAAGGTGTACACCACGCGTGACGGAGAGCTGCTGAGCCATGGACCTCCTTTA
ATCATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGAGGAAGAGGTCGTGGTAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCTGTGGAGCAAGAAGGAAATCT
ACCAGAAAACCCACAAGTGGAACAACCGGGTGGACAGCCGGGGCCTGCGGTAGGACCTGTCACGGTGGATATTCAGGCAATTGTTCAGACCGCAGTTCAGGCCGCACAAG
CGTACCCATTCAATTCCGGCGATTCAAGCAGTGGGTCTTCAAGTTTCAGCGTGTTTGAGCAATTTCGGCAGTGGGTGCCCGTGGTGTTTGGAGGCCGAATTATCAAATTT
GAGCGATTTGGGACTGCTGGACAGCAAGCTGTGGTTCTGTTTGGGGTAAGCTTTGCTTGCTTAAGAACCTTGGAGTTAAGGAATTTCTTGGAGGTTAATCAAGTATCTCC
TTCACTAAGGTGTATAAAAATTTTTGGGTTCCCTCTGCGTGTGCCGTTATGCTGCCGAATTTTCGGTAGCCTCATGACGGCTTGGGAATCATATCTACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCACGTCTCCTCTCGACCCGATTAAGATCAGGTTTCAGGTGTTGCTTCAGTTGAATTTATTGGTCCAAGAGAGCCTGTGGCAGTTAGGTGTTGCTATTCCTACAAT
CAAGCATTTGACTGAGAAGGGAGCTAAAGTGCTTCTGTCCAGTCATTTGATGGTAGCTATTAAGCATTTGAAGTTGAGCTTCTATCTTCTATTGTTACCTTTTTTCAAGC
GAATTGGAATTACAGCTTCAGATGTTGGATTCAAGGTTTCCAGTCGGAAGGTTGTAGAAGCTGAAAAGGGTAATCACTCCCACGATGACTTGCAGACAGATCATGAGAAT
CTCATGGTGCAACCAAATGGAGGAGACTATTCTGGGTCTGTTCCGAGATCCGACGCGCCGCCGCCTGCAACCCACTCACGAGCTGCCGTCGATCTGCGAGTCGCCGTCGC
CACTGTAGGCGCGGACAGCAGCGAGGAGGGACCATTTTTCCGTGTTTTCGGCTGTTTTAGTTTAGCTTCCGATTTCAAGGTGCCCGTGGTGTTTGGAGGCCGAATTATCA
AATTTGAGCGATTTGGGACTGCTGGACAGCAAGCTGTGGTTCTGTTTGGGGTAGAGGTAAAGGTGTACACCACGCGTGACGGAGAGCTGCTGAGCCATGGACCTCCTTTA
ATCATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGAGGAAGAGGTCGTGGTAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCTGTGGAGCAAGAAGGAAATCT
ACCAGAAAACCCACAAGTGGAACAACCGGGTGGACAGCCGGGGCCTGCGGTAGGACCTGTCACGGTGGATATTCAGGCAATTGTTCAGACCGCAGTTCAGGCCGCACAAG
CGTACCCATTCAATTCCGGCGATTCAAGCAGTGGGTCTTCAAGTTTCAGCGTGTTTGAGCAATTTCGGCAGTGGGTGCCCGTGGTGTTTGGAGGCCGAATTATCAAATTT
GAGCGATTTGGGACTGCTGGACAGCAAGCTGTGGTTCTGTTTGGGGTAAGCTTTGCTTGCTTAAGAACCTTGGAGTTAAGGAATTTCTTGGAGGTTAATCAAGTATCTCC
TTCACTAAGGTGTATAAAAATTTTTGGGTTCCCTCTGCGTGTGCCGTTATGCTGCCGAATTTTCGGTAGCCTCATGACGGCTTGGGAATCATATCTACCTTGA
Protein sequenceShow/hide protein sequence
MVTSPLDPIKIRFQVLLQLNLLVQESLWQLGVAIPTIKHLTEKGAKVLLSSHLMVAIKHLKLSFYLLLLPFFKRIGITASDVGFKVSSRKVVEAEKGNHSHDDLQTDHEN
LMVQPNGGDYSGSVPRSDAPPPATHSRAAVDLRVAVATVGADSSEEGPFFRVFGCFSLASDFKVPVVFGGRIIKFERFGTAGQQAVVLFGVEVKVYTTRDGELLSHGPPL
IMPPRAQGRGRGRGRGRGRGRTAPEQVVPPVEQEGNLPENPQVEQPGGQPGPAVGPVTVDIQAIVQTAVQAAQAYPFNSGDSSSGSSSFSVFEQFRQWVPVVFGGRIIKF
ERFGTAGQQAVVLFGVSFACLRTLELRNFLEVNQVSPSLRCIKIFGFPLRVPLCCRIFGSLMTAWESYLP