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Spg019471 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019471
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold1:39869013..39875185
RNA-Seq ExpressionSpg019471
SyntenySpg019471
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7810592.1 hypothetical protein G2W53_037335 [Senna tora]2.5e-0943.3Show/hide
Query:  GRRGAPEEYFHKYWDCFNGLCA-LPRSPLSEESLLLHFIQGLSHDDRMMLDIATGGDALDKKPSKAKEIISSLATYVGLIIFQARKVNSFDSSDSQD
        G +  P E  H YW+ F  LCA  P+  +SE+ L+L+F QGL   +R MLD A+GG  +DK P++AKEIIS++A              S D  DSQD
Subjt:  GRRGAPEEYFHKYWDCFNGLCA-LPRSPLSEESLLLHFIQGLSHDDRMMLDIATGGDALDKKPSKAKEIISSLATYVGLIIFQARKVNSFDSSDSQD

MCI09484.1 hypothetical protein [Trifolium medium]5.6e-0938.39Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRA--GKLLFGSLMTQLCQRVKI-VPGKDEERHFFKPT--IDLSLIGKLQQNSLQRKDK
        MPTTH+ T++  R++LL+CI+ G +IN+G II +EI+ C  K++  G L F  L+T+LC++  + V G+DE    F+PT   D   I  L + +  RK +
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRA--GKLLFGSLMTQLCQRVKI-VPGKDEERHFFKPT--IDLSLIGKLQQNSLQRKDK

Query:  TSISQATPPSGA
          + +AT  + A
Subjt:  TSISQATPPSGA

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]9.6e-0935.09Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNSLQRKDKTSISQ
        +PTTH  T+S DR++LLY ++ G  IN+G +I  EI AC  +++G L F SL+TQLC+  +     +EE+      ID   + ++ Q     + +T ++Q
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNSLQRKDKTSISQ

Query:  ATPPSGANMASPSQ
            S   +AS S+
Subjt:  ATPPSGANMASPSQ

RDY07516.1 hypothetical protein CR513_08367, partial [Mucuna pruriens]1.3e-0838.1Show/hide
Query:  GRRGAPEEYFHKYWDCFNGLCA-LPRSPLSEESLLLHFIQGLSHDDRMMLDIATGGDALDKKPSKAKEIISSLATYVGLIIFQ----ARKVNSFDSSDSQ
        G R    E  H+YW+CFN LCA  P   +SE+ L+ +F +GLS  DR M+D A+GG  +DK P  A+ +IS++A+       +    +R VN   ++ +Q
Subjt:  GRRGAPEEYFHKYWDCFNGLCA-LPRSPLSEESLLLHFIQGLSHDDRMMLDIATGGDALDKKPSKAKEIISSLATYVGLIIFQ----ARKVNSFDSSDSQ

Query:  DSEQQ
          E Q
Subjt:  DSEQQ

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]6.7e-1034.95Show/hide
Query:  PTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDE---ERHFFKPTIDLSLIGKLQQNSLQRKDKTSI
        PTTHDS+ISV++++LLYC++ G  IN+G ++ + I+ C ++R GKL F SL+ +L  +  +    D+   +    K TID+  + KL++ S + ++   +
Subjt:  PTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDE---ERHFFKPTIDLSLIGKLQQNSLQRKDKTSI

Query:  SQA
        ++A
Subjt:  SQA

TrEMBL top hitse value%identityAlignment
A0A2P5CEY2 Uncharacterized protein4.7e-0935.09Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNSLQRKDKTSISQ
        +PTTH  T+S DR++LLY ++ G  IN+G +I  EI AC  +++G L F SL+TQLC+  +     +EE+      ID   + ++ Q     + +T ++Q
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNSLQRKDKTSISQ

Query:  ATPPSGANMASPSQ
            S   +AS S+
Subjt:  ATPPSGANMASPSQ

A0A371HXJ2 Retrotrans_gag domain-containing protein (Fragment)6.1e-0938.1Show/hide
Query:  GRRGAPEEYFHKYWDCFNGLCA-LPRSPLSEESLLLHFIQGLSHDDRMMLDIATGGDALDKKPSKAKEIISSLATYVGLIIFQ----ARKVNSFDSSDSQ
        G R    E  H+YW+CFN LCA  P   +SE+ L+ +F +GLS  DR M+D A+GG  +DK P  A+ +IS++A+       +    +R VN   ++ +Q
Subjt:  GRRGAPEEYFHKYWDCFNGLCA-LPRSPLSEESLLLHFIQGLSHDDRMMLDIATGGDALDKKPSKAKEIISSLATYVGLIIFQ----ARKVNSFDSSDSQ

Query:  DSEQQ
          E Q
Subjt:  DSEQQ

A0A392PCH7 Uncharacterized protein2.7e-0938.39Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRA--GKLLFGSLMTQLCQRVKI-VPGKDEERHFFKPT--IDLSLIGKLQQNSLQRKDK
        MPTTH+ T++  R++LL+CI+ G +IN+G II +EI+ C  K++  G L F  L+T+LC++  + V G+DE    F+PT   D   I  L + +  RK +
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRA--GKLLFGSLMTQLCQRVKI-VPGKDEERHFFKPT--IDLSLIGKLQQNSLQRKDK

Query:  TSISQATPPSGA
          + +AT  + A
Subjt:  TSISQATPPSGA

A0A7J6FZ22 Uncharacterized protein7.9e-0943.48Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDEE
        +PT+HDST+S +R+ +LYCI+KG +IN+G +I +EI  C  +  GKL F  L+T+ C+   +    DE+
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDEE

A0A803Q715 Uncharacterized protein7.9e-0943.48Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDEE
        +PT+HDST+S +R+ +LYCI+KG +IN+G +I +EI  C  +  GKL F  L+T+ C+   +    DE+
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCACCCACGATAGCACCATCTCAGTAGATAGAGTCATGCTCCTCTACTGTATTATGAAGGGGTTGGAGATCAATATTGGGAGCATAATCAGGGAAGAGATTAT
AGCCTGTGGAAGGAAAAGAGCAGGTAAACTTTTATTTGGATCACTCATGACCCAGCTTTGCCAGAGGGTGAAGATTGTTCCGGGCAAGGATGAGGAGCGTCATTTCTTTA
AGCCTACCATTGACCTGTCCTTGATCGGGAAACTCCAACAAAATAGCCTCCAAAGGAAAGATAAAACCTCCATATCTCAGGCCACTCCACCATCAGGGGCGAACATGGCT
TCTCCATCCCAGCACACTCCTTTTTCAGGGCCCTCACCGTCATCTGAAGCCCTACCCATTGCCTACCATCAGCTAGATCAGACCAATTACGGAGTTTTGGAGCCATCTCG
GTGTCTTGGACGACGAGGAGCACCTGAGGAATACTTCCACAAGTACTGGGACTGCTTCAATGGGTTATGTGCACTTCCTCGTAGCCCATTGTCTGAGGAATCCTTGCTGT
TGCACTTCATTCAAGGATTATCACATGATGACAGAATGATGTTGGATATAGCAACTGGCGGGGATGCACTAGACAAAAAACCCAGTAAGGCTAAAGAGATAATTTCGAGC
TTGGCAACGTATGTTGGACTCATCATATTTCAAGCACGAAAGGTAAATTCTTTTGATTCTTCGGATAGCCAAGATTCTGAGCAACAGGAAGAAGGTAAGTCTAATGAGGT
TAGTGAGCCTGAGCTTGAACCTTCTTTAGATTCTAAGTCTGATTCATGTGATATGTCACGCATGATAGGAGAAGTGGAAATAGGTGATGAATTAGCTTTGGTCGATTCTA
TGAAAAATTCTATTTCCCGTAAGCTTATTAATTTTGATTTGCATGAGCTAGACTTAGTGATTTCGATTGTTGACCAATCTGTTGCTCATTATAATGGTGTCTTGATCAGG
CTTGAATGCTTAGGAGTGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGTTGTAAAGATATTTGAGCTTAGGCTATATTGGGAGCCGATCACGCTAATTGGTGT
TAATTCGGGCCAATTACAGAAATTTGGAGCCATCTCGGTGTCTTGGACGACAAGGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCACCCACGATAGCACCATCTCAGTAGATAGAGTCATGCTCCTCTACTGTATTATGAAGGGGTTGGAGATCAATATTGGGAGCATAATCAGGGAAGAGATTAT
AGCCTGTGGAAGGAAAAGAGCAGGTAAACTTTTATTTGGATCACTCATGACCCAGCTTTGCCAGAGGGTGAAGATTGTTCCGGGCAAGGATGAGGAGCGTCATTTCTTTA
AGCCTACCATTGACCTGTCCTTGATCGGGAAACTCCAACAAAATAGCCTCCAAAGGAAAGATAAAACCTCCATATCTCAGGCCACTCCACCATCAGGGGCGAACATGGCT
TCTCCATCCCAGCACACTCCTTTTTCAGGGCCCTCACCGTCATCTGAAGCCCTACCCATTGCCTACCATCAGCTAGATCAGACCAATTACGGAGTTTTGGAGCCATCTCG
GTGTCTTGGACGACGAGGAGCACCTGAGGAATACTTCCACAAGTACTGGGACTGCTTCAATGGGTTATGTGCACTTCCTCGTAGCCCATTGTCTGAGGAATCCTTGCTGT
TGCACTTCATTCAAGGATTATCACATGATGACAGAATGATGTTGGATATAGCAACTGGCGGGGATGCACTAGACAAAAAACCCAGTAAGGCTAAAGAGATAATTTCGAGC
TTGGCAACGTATGTTGGACTCATCATATTTCAAGCACGAAAGGTAAATTCTTTTGATTCTTCGGATAGCCAAGATTCTGAGCAACAGGAAGAAGGTAAGTCTAATGAGGT
TAGTGAGCCTGAGCTTGAACCTTCTTTAGATTCTAAGTCTGATTCATGTGATATGTCACGCATGATAGGAGAAGTGGAAATAGGTGATGAATTAGCTTTGGTCGATTCTA
TGAAAAATTCTATTTCCCGTAAGCTTATTAATTTTGATTTGCATGAGCTAGACTTAGTGATTTCGATTGTTGACCAATCTGTTGCTCATTATAATGGTGTCTTGATCAGG
CTTGAATGCTTAGGAGTGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGTTGTAAAGATATTTGAGCTTAGGCTATATTGGGAGCCGATCACGCTAATTGGTGT
TAATTCGGGCCAATTACAGAAATTTGGAGCCATCTCGGTGTCTTGGACGACAAGGAGGTGA
Protein sequenceShow/hide protein sequence
MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIREEIIACGRKRAGKLLFGSLMTQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNSLQRKDKTSISQATPPSGANMA
SPSQHTPFSGPSPSSEALPIAYHQLDQTNYGVLEPSRCLGRRGAPEEYFHKYWDCFNGLCALPRSPLSEESLLLHFIQGLSHDDRMMLDIATGGDALDKKPSKAKEIISS
LATYVGLIIFQARKVNSFDSSDSQDSEQQEEGKSNEVSEPELEPSLDSKSDSCDMSRMIGEVEIGDELALVDSMKNSISRKLINFDLHELDLVISIVDQSVAHYNGVLIR
LECLGVSYLAHIPVVTPIVVKIFELRLYWEPITLIGVNSGQLQKFGAISVSWTTRR