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Spg019501 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019501
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:39205840..39206647
RNA-Seq ExpressionSpg019501
SyntenySpg019501
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-0946.15Show/hide
Query:  SAGWAPLHRRTSKRWLYWACPT----QRRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQ---EGQRVSL----------------------EEDDVRWL
        SAG APL +R   RW     PT    +  S  LVEIELPVPD LPTSA SSRS+SS+  +   E   V +                        DDV WL
Subjt:  SAGWAPLHRRTSKRWLYWACPT----QRRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQ---EGQRVSL----------------------EEDDVRWL

Query:  HAIFRTKLAGGLGGGVT
        HAIFR K AGG GGGVT
Subjt:  HAIFRTKLAGGLGGGVT

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]5.3e-2662.73Show/hide
Query:  GGPHYDKDDGSAGWAPLHRRTSKRWLYWACPTQRRSAML----------VEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLA
        GGPHYDKDDG+A  APLHRRTSKRWLYWACPT RRS ML          VEIEL VPDTLPTSA SS S+S S         +  DDV WLH +FR K  
Subjt:  GGPHYDKDDGSAGWAPLHRRTSKRWLYWACPTQRRSAML----------VEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLA

Query:  GGLGGGVTLI
        GG GG VT I
Subjt:  GGLGGGVTLI

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]5.3e-2662.73Show/hide
Query:  GGPHYDKDDGSAGWAPLHRRTSKRWLYWACPTQRRSAML----------VEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLA
        GGPHYDKDDG+A  APLHRRTSKRWLYWACPT RRS ML          VEIEL VPDTLPTSA SS S+S S         +  DDV WLH +FR K  
Subjt:  GGPHYDKDDGSAGWAPLHRRTSKRWLYWACPTQRRSAML----------VEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLA

Query:  GGLGGGVTLI
        GG GG VT I
Subjt:  GGLGGGVTLI

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-0946.15Show/hide
Query:  SAGWAPLHRRTSKRWLYWACPT----QRRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQ---EGQRVSL----------------------EEDDVRWL
        SAG APL +R   RW     PT    +  S  LVEIELPVPD LPTSA SSRS+SS+  +   E   V +                        DDV WL
Subjt:  SAGWAPLHRRTSKRWLYWACPT----QRRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQ---EGQRVSL----------------------EEDDVRWL

Query:  HAIFRTKLAGGLGGGVT
        HAIFR K AGG GGGVT
Subjt:  HAIFRTKLAGGLGGGVT

TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa]3.8e-0855.41Show/hide
Query:  RRSAMLVEIELPVPDTLPTSAGSSRSSSSS---TFQEGQRVSL-------EEDDVRWLHAIFRTKLAGGLGGGV
        R +  +VEIELPVPDTLPTSA SS S+SS+    + E   V +        EDDV WLHA+FR K AGG GGGV
Subjt:  RRSAMLVEIELPVPDTLPTSAGSSRSSSSS---TFQEGQRVSL-------EEDDVRWLHAIFRTKLAGGLGGGV

TrEMBL top hitse value%identityAlignment
A0A5A7T7M6 Reverse transcriptase1.3e-0946.15Show/hide
Query:  SAGWAPLHRRTSKRWLYWACPT----QRRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQ---EGQRVSL----------------------EEDDVRWL
        SAG APL +R   RW     PT    +  S  LVEIELPVPD LPTSA SSRS+SS+  +   E   V +                        DDV WL
Subjt:  SAGWAPLHRRTSKRWLYWACPT----QRRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQ---EGQRVSL----------------------EEDDVRWL

Query:  HAIFRTKLAGGLGGGVT
        HAIFR K AGG GGGVT
Subjt:  HAIFRTKLAGGLGGGVT

A0A5A7VGQ5 Uncharacterized protein2.6e-2662.73Show/hide
Query:  GGPHYDKDDGSAGWAPLHRRTSKRWLYWACPTQRRSAML----------VEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLA
        GGPHYDKDDG+A  APLHRRTSKRWLYWACPT RRS ML          VEIEL VPDTLPTSA SS S+S S         +  DDV WLH +FR K  
Subjt:  GGPHYDKDDGSAGWAPLHRRTSKRWLYWACPTQRRSAML----------VEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLA

Query:  GGLGGGVTLI
        GG GG VT I
Subjt:  GGLGGGVTLI

A0A5D3BAD1 Retrotrans_gag domain-containing protein1.9e-0860Show/hide
Query:  RRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVT
        R +  +VEIELPVPDTLPTSA S  S+S ST        +  DDV WLHA+FR K AGG GGGVT
Subjt:  RRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVT

A0A5D3BG85 Uncharacterized protein2.6e-2662.73Show/hide
Query:  GGPHYDKDDGSAGWAPLHRRTSKRWLYWACPTQRRSAML----------VEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLA
        GGPHYDKDDG+A  APLHRRTSKRWLYWACPT RRS ML          VEIEL VPDTLPTSA SS S+S S         +  DDV WLH +FR K  
Subjt:  GGPHYDKDDGSAGWAPLHRRTSKRWLYWACPTQRRSAML----------VEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLA

Query:  GGLGGGVTLI
        GG GG VT I
Subjt:  GGLGGGVTLI

A0A5D3BTP3 Reverse transcriptase1.3e-0946.15Show/hide
Query:  SAGWAPLHRRTSKRWLYWACPT----QRRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQ---EGQRVSL----------------------EEDDVRWL
        SAG APL +R   RW     PT    +  S  LVEIELPVPD LPTSA SSRS+SS+  +   E   V +                        DDV WL
Subjt:  SAGWAPLHRRTSKRWLYWACPT----QRRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQ---EGQRVSL----------------------EEDDVRWL

Query:  HAIFRTKLAGGLGGGVT
        HAIFR K AGG GGGVT
Subjt:  HAIFRTKLAGGLGGGVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTCGTGGGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGTGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCC
TACACAACGTAGATCGGCCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGGAAGTTCCAGATCAAGCTCCAGTTCTACGTTTCAGGAGG
GTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTAGGAGGGGGTGTGACATTAATAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGTCGTGGGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGTGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCC
TACACAACGTAGATCGGCCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGGAAGTTCCAGATCAAGCTCCAGTTCTACGTTTCAGGAGG
GTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTAGGAGGGGGTGTGACATTAATAGTCTAA
Protein sequenceShow/hide protein sequence
MLSWVLGGPHYDKDDGSAGWAPLHRRTSKRWLYWACPTQRRSAMLVEIELPVPDTLPTSAGSSRSSSSSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLIV