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Spg019512 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019512
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold1:39168106..39169158
RNA-Seq ExpressionSpg019512
SyntenySpg019512
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RDX73598.1 hypothetical protein CR513_46774, partial [Mucuna pruriens]3.8e-0548.33Show/hide
Query:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK
        I Q  EE  H+YW+ FN LCA  PH  +SE+ L+ +F ERLS  D +M+D A+GG  ++K
Subjt:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK

RDX87927.1 hypothetical protein CR513_30539, partial [Mucuna pruriens]4.2e-0443.33Show/hide
Query:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK
        I Q P E  H+YW+ FN LCA  PH  ++E+ L+ +F + LS  D  M+D+A+GG  ++K
Subjt:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK

RDY04252.1 hypothetical protein CR513_12057, partial [Mucuna pruriens]8.5e-0546.77Show/hide
Query:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEKKT
        I Q   E  H+YW+ FN LCA  PH  +SE+ L+ +F ERLS  D  M+D A+GG  ++K T
Subjt:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEKKT

RDY07516.1 hypothetical protein CR513_08367, partial [Mucuna pruriens]1.1e-0446.67Show/hide
Query:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK
        I Q   E  H+YW+CFN LCA  PH  +SE+ L+ +F E LS  D  M+D A+GG  ++K
Subjt:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK

XP_041011356.1 uncharacterized protein LOC121255143 [Juglans microcarpa x Juglans regia]1.5e-0445Show/hide
Query:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK
        I Q  EE  H+YW+CF  LCA  PH  +SE+ L+ +F E L   D  M+D A+GG  ++K
Subjt:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK

TrEMBL top hitse value%identityAlignment
A0A371F5L5 Retrotrans_gag domain-containing protein (Fragment)1.8e-0548.33Show/hide
Query:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK
        I Q  EE  H+YW+ FN LCA  PH  +SE+ L+ +F ERLS  D +M+D A+GG  ++K
Subjt:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK

A0A371GBJ2 Retrotrans_gag domain-containing protein (Fragment)2.0e-0443.33Show/hide
Query:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK
        I Q P E  H+YW+ FN LCA  PH  ++E+ L+ +F + LS  D  M+D+A+GG  ++K
Subjt:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK

A0A371HCS3 Pol polyprotein (Fragment)2.7e-0445Show/hide
Query:  IIQAPEEYFHKYWDCFNGLC-ALPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK
        I+Q P E  HKYW+ FN LC   PH  +SE+ L+ +F E LS  D  M+D A+G  +++K
Subjt:  IIQAPEEYFHKYWDCFNGLC-ALPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK

A0A371HNG3 Retrotrans_gag domain-containing protein (Fragment)4.1e-0546.77Show/hide
Query:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEKKT
        I Q   E  H+YW+ FN LCA  PH  +SE+ L+ +F ERLS  D  M+D A+GG  ++K T
Subjt:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEKKT

A0A371HXJ2 Retrotrans_gag domain-containing protein (Fragment)5.4e-0546.67Show/hide
Query:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK
        I Q   E  H+YW+CFN LCA  PH  +SE+ L+ +F E LS  D  M+D A+GG  ++K
Subjt:  IIQAPEEYFHKYWDCFNGLCA-LPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACATCATCCAAGCACCTGAGGAATACTTCCACAAGTACTGGGACTGCTTCAATGGGTTATGTGCACTTCCTCATAGCCCATTGTCTGAGGAATCCTTGCTGTTGCA
CTTCATTGAAAGATTATCACCTGATGACATAATGATGTTGGATATAGCAACTGGCGGGGATGCACTAGAAAAAAAAACCCACCAATATTCTGAACAACAGGAAGAAGGTA
AGTCTAACGAGGTTAGTGAGCCTGAGCTTGAACCTTCTTTAGATTCTAAGTCTGATTCATGTGATATGTCACGCATGATAGGAGAAGTGGAAATTGATGATGAATTAGCT
TTGGTCAATTCTATGAAAAATTCTATTTCCCGTAAGCTTATTAATTTTGATTTGCATGGGCTAGACTTAGTGATTCCGATTGTTGACCAGTCTGTTGCTCATTATAAAGG
TGTCTTGATCAGTTGGGGGTGGGGAATTATACTTTATGTTTCTGTTGGGCCTTCAACATCTGAGCGTCAGGCCAACATTTGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACATCATCCAAGCACCTGAGGAATACTTCCACAAGTACTGGGACTGCTTCAATGGGTTATGTGCACTTCCTCATAGCCCATTGTCTGAGGAATCCTTGCTGTTGCA
CTTCATTGAAAGATTATCACCTGATGACATAATGATGTTGGATATAGCAACTGGCGGGGATGCACTAGAAAAAAAAACCCACCAATATTCTGAACAACAGGAAGAAGGTA
AGTCTAACGAGGTTAGTGAGCCTGAGCTTGAACCTTCTTTAGATTCTAAGTCTGATTCATGTGATATGTCACGCATGATAGGAGAAGTGGAAATTGATGATGAATTAGCT
TTGGTCAATTCTATGAAAAATTCTATTTCCCGTAAGCTTATTAATTTTGATTTGCATGGGCTAGACTTAGTGATTCCGATTGTTGACCAGTCTGTTGCTCATTATAAAGG
TGTCTTGATCAGTTGGGGGTGGGGAATTATACTTTATGTTTCTGTTGGGCCTTCAACATCTGAGCGTCAGGCCAACATTTGTGCTTAA
Protein sequenceShow/hide protein sequence
MYIIQAPEEYFHKYWDCFNGLCALPHSPLSEESLLLHFIERLSPDDIMMLDIATGGDALEKKTHQYSEQQEEGKSNEVSEPELEPSLDSKSDSCDMSRMIGEVEIDDELA
LVNSMKNSISRKLINFDLHGLDLVIPIVDQSVAHYKGVLISWGWGIILYVSVGPSTSERQANICA